| Definition | Thermus thermophilus HB8 chromosome, complete genome. |
|---|---|
| Accession | NC_006461 |
| Length | 1,849,742 |
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The map label for this gene is pyk [H]
Identifier: 55979972
GI number: 55979972
Start: 2490
End: 3914
Strand: Direct
Name: pyk [H]
Synonym: TTHA0003
Alternate gene names: 55979972
Gene position: 2490-3914 (Clockwise)
Preceding gene: 55979971
Following gene: 55979978
Centisome position: 0.13
GC content: 71.02
Gene sequence:
>1425_bases ATGCCGCCTTTTAAGCGCACCAAGATCGTGGCCACCCTGGGGCCGGCCACGGACGACAAGGAGGTGATCCGCGCCCTGGC GGAGGCCGGGGCCGACGTCTTCCGCCTGAACTTCAGCCACGGCGCCCCCGAGGACCACAGGCGCCGGGTGGGCTGGGTGC GGGAGGTGGCGGAGGAGCTCGGCCGAACCCTGGCCGTCCTCCAGGACCTCCAGGGCCCGAAGATCCGTGTGGGCCGTTTC CGGGAGGGCCAGGTTCTCCTCCGCCCGGGGCAGAGGTTCGTCCTCACCGCCGAGCCCGTGGAGGGGGACGAGCACCGCGT TTCCGTGAGCTACAAGGGGCTTCCCGAGGACGTTTCCCCGGGGCAGATCCTCCTTCTGGACGACGGCCGCATCCGGCTCA AGGTCCTGGAGGTCCGGAGCCCGGAGATCCTCACGGAGGTGGAGGTGGGCGGGGTCCTCTCCAACAACAAGGGGATCAAC ATCCCTGGGGCGGACCTCTCCATCCCCGCCCTCTCGGAGAAGGATATCCAGGACCTGGCCCTGGGGGCGGAGCTCGGGGT GGACTGGGTGGCGGTCTCCTTCGTCCGCACGCGGGACGACCTCCTCCTCGCCCGGCACTACCTCTCCCGCTACGGCTCCA AGGCCAGGCTCATGGCCAAGATCGAGAAGCCCTCGGCCGTGGCCCGGTTTGAGGAGATCCTGGAGGAGGCGGACGGGATC ATGGTGGCCCGGGGGGACCTCGGGGTGGAGATGCCCCTGGAGGAGGTGCCCATCGTCCAGAAGCGCCTCATCCTCCGGTG CATCGCCGCCGGGAAGCCGGTGATCACCGCCACCCAGATGCTGGAGTCCATGGTGCAGAACCCGAGCCCCACCCGGGCCG AGGCCTCGGACGTGGCCAACGCCATCTTTGACGGGACCGACGCGGTGATGCTCTCCGCGGAGACGGCGGCCGGGGCCTAC CCGGTGGAGGCGGTGGCCATGATGGCGAGGATCGCCAAGGCGGTGGAGTCTTCCCCGGAGTTCTTGCAGAAGCTCAACGT CCTCCGCCCCGCCCCCACCCCCACCACCCAGGACGCCATCGCCCAGGCGGCGGACGACGTGGTGGAGGCGGTGGGGGCCC GGGCCATCGTGGTCTTCACGGCCACGGGCGGCTCGGCGCGGAGGATCGCCCGCACCCGGCCCCAGGTGCCCATCCTGGCC CTCACCCCGAACCCCGAGGTGCGGAACCAGCTGGCCTTGGTCTGGGGGGTCTACCCCCATCTCGCCCCCGACCCCCAGGA CACCGACGACATGGTCCGCATCGCCCTCAGGGAGGTGAAGGCCCTGGGGCTCGCCCAGGTGGGGGACCGGGTGGTCATCG CCGCCGGGGTTCCCTTCGGGGTCCGGGGGACGACGAACCTCATCCGCGTGGAGCGGGTGGGGTAG
Upstream 100 bases:
>100_bases ATCAAGACCGGTTCCCTTTCCCGCTCCGACCGGCTGGCCAAGTACAACCAGCTCCTGCGCATTGAGGAGGAGCTGGGCCG GGCCGCGAGGTTTTTGGGGT
Downstream 100 bases:
>100_bases CTACCGGGGCAGGGTGAGCCGGTAGCGGAAAGAGCGGGCCTCCATGGGGTCCAGGACCGCCTCGAGGCGGTACCCCTCCG GCAGGAGGACCGCGCCGGGG
Product: pyruvate kinase
Products: NA
Alternate protein names: PK [H]
Number of amino acids: Translated: 474; Mature: 473
Protein sequence:
>474_residues MPPFKRTKIVATLGPATDDKEVIRALAEAGADVFRLNFSHGAPEDHRRRVGWVREVAEELGRTLAVLQDLQGPKIRVGRF REGQVLLRPGQRFVLTAEPVEGDEHRVSVSYKGLPEDVSPGQILLLDDGRIRLKVLEVRSPEILTEVEVGGVLSNNKGIN IPGADLSIPALSEKDIQDLALGAELGVDWVAVSFVRTRDDLLLARHYLSRYGSKARLMAKIEKPSAVARFEEILEEADGI MVARGDLGVEMPLEEVPIVQKRLILRCIAAGKPVITATQMLESMVQNPSPTRAEASDVANAIFDGTDAVMLSAETAAGAY PVEAVAMMARIAKAVESSPEFLQKLNVLRPAPTPTTQDAIAQAADDVVEAVGARAIVVFTATGGSARRIARTRPQVPILA LTPNPEVRNQLALVWGVYPHLAPDPQDTDDMVRIALREVKALGLAQVGDRVVIAAGVPFGVRGTTNLIRVERVG
Sequences:
>Translated_474_residues MPPFKRTKIVATLGPATDDKEVIRALAEAGADVFRLNFSHGAPEDHRRRVGWVREVAEELGRTLAVLQDLQGPKIRVGRF REGQVLLRPGQRFVLTAEPVEGDEHRVSVSYKGLPEDVSPGQILLLDDGRIRLKVLEVRSPEILTEVEVGGVLSNNKGIN IPGADLSIPALSEKDIQDLALGAELGVDWVAVSFVRTRDDLLLARHYLSRYGSKARLMAKIEKPSAVARFEEILEEADGI MVARGDLGVEMPLEEVPIVQKRLILRCIAAGKPVITATQMLESMVQNPSPTRAEASDVANAIFDGTDAVMLSAETAAGAY PVEAVAMMARIAKAVESSPEFLQKLNVLRPAPTPTTQDAIAQAADDVVEAVGARAIVVFTATGGSARRIARTRPQVPILA LTPNPEVRNQLALVWGVYPHLAPDPQDTDDMVRIALREVKALGLAQVGDRVVIAAGVPFGVRGTTNLIRVERVG >Mature_473_residues PPFKRTKIVATLGPATDDKEVIRALAEAGADVFRLNFSHGAPEDHRRRVGWVREVAEELGRTLAVLQDLQGPKIRVGRFR EGQVLLRPGQRFVLTAEPVEGDEHRVSVSYKGLPEDVSPGQILLLDDGRIRLKVLEVRSPEILTEVEVGGVLSNNKGINI PGADLSIPALSEKDIQDLALGAELGVDWVAVSFVRTRDDLLLARHYLSRYGSKARLMAKIEKPSAVARFEEILEEADGIM VARGDLGVEMPLEEVPIVQKRLILRCIAAGKPVITATQMLESMVQNPSPTRAEASDVANAIFDGTDAVMLSAETAAGAYP VEAVAMMARIAKAVESSPEFLQKLNVLRPAPTPTTQDAIAQAADDVVEAVGARAIVVFTATGGSARRIARTRPQVPILAL TPNPEVRNQLALVWGVYPHLAPDPQDTDDMVRIALREVKALGLAQVGDRVVIAAGVPFGVRGTTNLIRVERVG
Specific function: Glycolysis; final step. [C]
COG id: COG0469
COG function: function code G; Pyruvate kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pyruvate kinase family [H]
Homologues:
Organism=Homo sapiens, GI33286418, Length=492, Percent_Identity=42.8861788617886, Blast_Score=350, Evalue=1e-96, Organism=Homo sapiens, GI33286422, Length=492, Percent_Identity=42.0731707317073, Blast_Score=345, Evalue=7e-95, Organism=Homo sapiens, GI33286420, Length=492, Percent_Identity=42.0731707317073, Blast_Score=345, Evalue=7e-95, Organism=Homo sapiens, GI32967597, Length=487, Percent_Identity=41.8891170431211, Blast_Score=337, Evalue=1e-92, Organism=Homo sapiens, GI10835121, Length=487, Percent_Identity=41.8891170431211, Blast_Score=337, Evalue=1e-92, Organism=Homo sapiens, GI310128732, Length=292, Percent_Identity=41.7808219178082, Blast_Score=207, Evalue=1e-53, Organism=Homo sapiens, GI310128730, Length=292, Percent_Identity=41.7808219178082, Blast_Score=207, Evalue=1e-53, Organism=Homo sapiens, GI310128736, Length=242, Percent_Identity=36.7768595041322, Blast_Score=146, Evalue=4e-35, Organism=Homo sapiens, GI310128734, Length=242, Percent_Identity=36.7768595041322, Blast_Score=146, Evalue=4e-35, Organism=Homo sapiens, GI310128738, Length=214, Percent_Identity=36.9158878504673, Blast_Score=128, Evalue=1e-29, Organism=Escherichia coli, GI1787965, Length=477, Percent_Identity=44.8637316561845, Blast_Score=382, Evalue=1e-107, Organism=Escherichia coli, GI1788160, Length=476, Percent_Identity=46.6386554621849, Blast_Score=382, Evalue=1e-107, Organism=Caenorhabditis elegans, GI17544584, Length=480, Percent_Identity=39.1666666666667, Blast_Score=335, Evalue=5e-92, Organism=Caenorhabditis elegans, GI17506829, Length=487, Percent_Identity=40.2464065708419, Blast_Score=300, Evalue=9e-82, Organism=Caenorhabditis elegans, GI71984413, Length=487, Percent_Identity=40.2464065708419, Blast_Score=300, Evalue=1e-81, Organism=Caenorhabditis elegans, GI71984406, Length=487, Percent_Identity=40.2464065708419, Blast_Score=300, Evalue=1e-81, Organism=Caenorhabditis elegans, GI17506831, Length=487, Percent_Identity=40.2464065708419, Blast_Score=300, Evalue=2e-81, Organism=Saccharomyces cerevisiae, GI6319279, Length=486, Percent_Identity=40.1234567901235, Blast_Score=325, Evalue=1e-89, Organism=Saccharomyces cerevisiae, GI6324923, Length=487, Percent_Identity=39.4250513347023, Blast_Score=316, Evalue=4e-87, Organism=Drosophila melanogaster, GI24648964, Length=489, Percent_Identity=39.6728016359918, Blast_Score=315, Evalue=5e-86, Organism=Drosophila melanogaster, GI28571814, Length=489, Percent_Identity=39.6728016359918, Blast_Score=315, Evalue=5e-86, Organism=Drosophila melanogaster, GI24648966, Length=405, Percent_Identity=42.7160493827161, Blast_Score=305, Evalue=7e-83, Organism=Drosophila melanogaster, GI24581235, Length=479, Percent_Identity=34.446764091858, Blast_Score=261, Evalue=7e-70, Organism=Drosophila melanogaster, GI24646914, Length=268, Percent_Identity=41.7910447761194, Blast_Score=188, Evalue=8e-48,
Paralogues:
None
Copy number: 500 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 124 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001697 - InterPro: IPR015813 - InterPro: IPR011037 - InterPro: IPR015794 - InterPro: IPR018209 - InterPro: IPR015793 - InterPro: IPR015795 - InterPro: IPR015806 [H]
Pfam domain/function: PF00224 PK; PF02887 PK_C [H]
EC number: =2.7.1.40 [H]
Molecular weight: Translated: 51180; Mature: 51049
Theoretical pI: Translated: 5.61; Mature: 5.61
Prosite motif: PS00110 PYRUVATE_KINASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPPFKRTKIVATLGPATDDKEVIRALAEAGADVFRLNFSHGAPEDHRRRVGWVREVAEEL CCCCCCEEEEEEECCCCCHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHH GRTLAVLQDLQGPKIRVGRFREGQVLLRPGQRFVLTAEPVEGDEHRVSVSYKGLPEDVSP HHHHHHHHHCCCCCEEECCCCCCCEEEECCCEEEEEECCCCCCCEEEEEEECCCCCCCCC GQILLLDDGRIRLKVLEVRSPEILTEVEVGGVLSNNKGINIPGADLSIPALSEKDIQDLA CEEEEEECCCEEEEEEEECCCCCEEEEEECCEEECCCCCCCCCCCCCCCCCCCCCHHHHH LGAELGVDWVAVSFVRTRDDLLLARHYLSRYGSKARLMAKIEKPSAVARFEEILEEADGI HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHCCCE MVARGDLGVEMPLEEVPIVQKRLILRCIAAGKPVITATQMLESMVQNPSPTRAEASDVAN EEEECCCCCCCCHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHH AIFDGTDAVMLSAETAAGAYPVEAVAMMARIAKAVESSPEFLQKLNVLRPAPTPTTQDAI HHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCHHHHH AQAADDVVEAVGARAIVVFTATGGSARRIARTRPQVPILALTPNPEVRNQLALVWGVYPH HHHHHHHHHHCCCCEEEEEEECCCCHHHHHHCCCCCEEEEECCCHHHHHHEEEEEECCCC LAPDPQDTDDMVRIALREVKALGLAQVGDRVVIAAGVPFGVRGTTNLIRVERVG CCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCEEEEEECC >Mature Secondary Structure PPFKRTKIVATLGPATDDKEVIRALAEAGADVFRLNFSHGAPEDHRRRVGWVREVAEEL CCCCCEEEEEEECCCCCHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHH GRTLAVLQDLQGPKIRVGRFREGQVLLRPGQRFVLTAEPVEGDEHRVSVSYKGLPEDVSP HHHHHHHHHCCCCCEEECCCCCCCEEEECCCEEEEEECCCCCCCEEEEEEECCCCCCCCC GQILLLDDGRIRLKVLEVRSPEILTEVEVGGVLSNNKGINIPGADLSIPALSEKDIQDLA CEEEEEECCCEEEEEEEECCCCCEEEEEECCEEECCCCCCCCCCCCCCCCCCCCCHHHHH LGAELGVDWVAVSFVRTRDDLLLARHYLSRYGSKARLMAKIEKPSAVARFEEILEEADGI HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHCCCE MVARGDLGVEMPLEEVPIVQKRLILRCIAAGKPVITATQMLESMVQNPSPTRAEASDVAN EEEECCCCCCCCHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHH AIFDGTDAVMLSAETAAGAYPVEAVAMMARIAKAVESSPEFLQKLNVLRPAPTPTTQDAI HHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCHHHHH AQAADDVVEAVGARAIVVFTATGGSARRIARTRPQVPILALTPNPEVRNQLALVWGVYPH HHHHHHHHHHCCCCEEEEEEECCCCHHHHHHCCCCCEEEEECCCHHHHHHEEEEEECCCC LAPDPQDTDDMVRIALREVKALGLAQVGDRVVIAAGVPFGVRGTTNLIRVERVG CCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8074528; 12948626 [H]