Click here to switch to the map view.

The map label for this gene is 54295801

Identifier: 54295801

GI number: 54295801

Start: 3298589

End: 3299455

Strand: Reverse

Name: 54295801

Synonym: lpl2891

Alternate gene names: NA

Gene position: 3299455-3298589 (Counterclockwise)

Preceding gene: 54295802

Following gene: 54295800

Centisome position: 98.62

GC content: 42.79

Gene sequence:

>867_bases
ATGTTTAGTTTGAAAAAAACAGCAGTGGCAGTACTCGCCTTAGGAAGCGGTGCAGTGTTTGCTGGAACCATGGGACCAGT
TTGCACCCCAGGTAATGTAACTGTTCCTTGCGAAAGAACTGCATGGGATATTGGTATCACCGCACTATATTTGCAACCAA
TCTATGATGCTGATTGGGGCTACAATGGTTTCACCCAGGTTGGTGGCTGGCAGCATTGGCATGATGTTGACCATGAGTGG
GATTGGGGCTTCAAATTAGAAGGTTCTTATCACTTCAATACTGGTAACGACATCAATGTGAACTGGTATCATTTTGATAA
TGACAGCGATCACTGGGCTGATTTTGCTAACTGGCACAACTACAACAACAAGTGGGATGCTGCCAATGCTGAATTAGGTC
AATTCGTGGATTTCAGCGCTAACAAGAAAATGCGTTTCCACGGCGGTGTTCAATATGCTCGCATTGAATCTGATGTGAAC
CGTTATTTCAATAACTTTGCCTTTAACGGATTCAACTCTAAGTTCAATGGCTTTGGTCCTCGCACTGGTTTAGACATGAA
CTATGTATTTGGCAATGGCTTTGGTGTTTATGCTAAAGGAGCTGCTGCTATTCTGGTTGGTACCAGCGATTTCTACGATG
GAGTCAACTTCATTAATGGTTCTAAAAATGCTATCGTTCCTGAGTTAGAAGCTAAGCTTGGTGCTGATTACACTTACGCA
ATGGCTCAAGGCGATTTGACTTTAGACGTTGGTTACATGTGGTTTAACTACTTCAACGCCATGCACAATACTGCTACTAA
TGGTCTTGAAACTGATTTCGCAGCTTCTGGTCCTTACATTGGTTTGAAGTATGTTGGTAATGTGTAA

Upstream 100 bases:

>100_bases
GCATGCTTCGAACCTAAGCGACGATGCGTGCTATTGACAACTCCAAATGGTGAGTTATCAATAAAATGGAAACTCAATAA
TAAACAAGTGGAGACAAGGC

Downstream 100 bases:

>100_bases
TTTGTTAAGTTGATAAGAAATTTCGGCAATACTGTTGACTTTATAGAAGTCCGGCTGGATAATTTATCCAGGTACGCTCT
CGATTAGAGCGAAGAATGCG

Product: major outer membrane protein precursor

Products: NA

Alternate protein names: Outer Membrane Protein Homolog

Number of amino acids: Translated: 288; Mature: 288

Protein sequence:

>288_residues
MFSLKKTAVAVLALGSGAVFAGTMGPVCTPGNVTVPCERTAWDIGITALYLQPIYDADWGYNGFTQVGGWQHWHDVDHEW
DWGFKLEGSYHFNTGNDINVNWYHFDNDSDHWADFANWHNYNNKWDAANAELGQFVDFSANKKMRFHGGVQYARIESDVN
RYFNNFAFNGFNSKFNGFGPRTGLDMNYVFGNGFGVYAKGAAAILVGTSDFYDGVNFINGSKNAIVPELEAKLGADYTYA
MAQGDLTLDVGYMWFNYFNAMHNTATNGLETDFAASGPYIGLKYVGNV

Sequences:

>Translated_288_residues
MFSLKKTAVAVLALGSGAVFAGTMGPVCTPGNVTVPCERTAWDIGITALYLQPIYDADWGYNGFTQVGGWQHWHDVDHEW
DWGFKLEGSYHFNTGNDINVNWYHFDNDSDHWADFANWHNYNNKWDAANAELGQFVDFSANKKMRFHGGVQYARIESDVN
RYFNNFAFNGFNSKFNGFGPRTGLDMNYVFGNGFGVYAKGAAAILVGTSDFYDGVNFINGSKNAIVPELEAKLGADYTYA
MAQGDLTLDVGYMWFNYFNAMHNTATNGLETDFAASGPYIGLKYVGNV
>Mature_288_residues
MFSLKKTAVAVLALGSGAVFAGTMGPVCTPGNVTVPCERTAWDIGITALYLQPIYDADWGYNGFTQVGGWQHWHDVDHEW
DWGFKLEGSYHFNTGNDINVNWYHFDNDSDHWADFANWHNYNNKWDAANAELGQFVDFSANKKMRFHGGVQYARIESDVN
RYFNNFAFNGFNSKFNGFGPRTGLDMNYVFGNGFGVYAKGAAAILVGTSDFYDGVNFINGSKNAIVPELEAKLGADYTYA
MAQGDLTLDVGYMWFNYFNAMHNTATNGLETDFAASGPYIGLKYVGNV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32070; Mature: 32070

Theoretical pI: Translated: 4.75; Mature: 4.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFSLKKTAVAVLALGSGAVFAGTMGPVCTPGNVTVPCERTAWDIGITALYLQPIYDADWG
CCCCHHEEEEEEEECCCEEEECCCCCCCCCCCEEECCCCCEEECCEEEEEEEECCCCCCC
YNGFTQVGGWQHWHDVDHEWDWGFKLEGSYHFNTGNDINVNWYHFDNDSDHWADFANWHN
CCCCCCCCCCCCHHCCCCCCCCCEEECCEEEECCCCEEEEEEEEECCCCCHHHHHHHHCC
YNNKWDAANAELGQFVDFSANKKMRFHGGVQYARIESDVNRYFNNFAFNGFNSKFNGFGP
CCCCCCCCCCCCCCEEECCCCCEEEECCCEEEEEHHHHHHHHHHCCEECCCCCCCCCCCC
RTGLDMNYVFGNGFGVYAKGAAAILVGTSDFYDGVNFINGSKNAIVPELEAKLGADYTYA
CCCCEEEEEEECCEEEEECCCEEEEEECCHHHCCCEEECCCCCCCCCHHHHHHCCCEEEE
MAQGDLTLDVGYMWFNYFNAMHNTATNGLETDFAASGPYIGLKYVGNV
EECCCEEEEHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCC
>Mature Secondary Structure
MFSLKKTAVAVLALGSGAVFAGTMGPVCTPGNVTVPCERTAWDIGITALYLQPIYDADWG
CCCCHHEEEEEEEECCCEEEECCCCCCCCCCCEEECCCCCEEECCEEEEEEEECCCCCCC
YNGFTQVGGWQHWHDVDHEWDWGFKLEGSYHFNTGNDINVNWYHFDNDSDHWADFANWHN
CCCCCCCCCCCCHHCCCCCCCCCEEECCEEEECCCCEEEEEEEEECCCCCHHHHHHHHCC
YNNKWDAANAELGQFVDFSANKKMRFHGGVQYARIESDVNRYFNNFAFNGFNSKFNGFGP
CCCCCCCCCCCCCCEEECCCCCEEEECCCEEEEEHHHHHHHHHHCCEECCCCCCCCCCCC
RTGLDMNYVFGNGFGVYAKGAAAILVGTSDFYDGVNFINGSKNAIVPELEAKLGADYTYA
CCCCEEEEEEECCEEEEECCCEEEEEECCHHHCCCEEECCCCCCCCCHHHHHHCCCEEEE
MAQGDLTLDVGYMWFNYFNAMHNTATNGLETDFAASGPYIGLKYVGNV
EECCCEEEEHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA