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The map label for this gene is 54295410

Identifier: 54295410

GI number: 54295410

Start: 2847573

End: 2848469

Strand: Direct

Name: 54295410

Synonym: lpl2496

Alternate gene names: NA

Gene position: 2847573-2848469 (Clockwise)

Preceding gene: 54295409

Following gene: 54295418

Centisome position: 85.11

GC content: 37.57

Gene sequence:

>897_bases
ATGAGCAATAAACTACGCAGTGCACTTTATTCAGTACACCAATTAACTAAACAAATGCAGGGTTATTCCTTTGCCAGTAA
GGCAGACATGAAACACATGATTAATCGCTGCATGAAAGATCTACACGAATTGGGTTTTAAAGTTGGTCATTTGAATGGCC
TAAAGCCTAAACATATCTATGTACTTGTTGAGCATTGGAAAAAACAAGGGAAGAGTCCTGCAACTATCAAAAATTATATG
TCCAAATTGCGTAAGCTCGCTTATTTTCTGGATAAACCTAAATTGGTTAAAACTGGTAATGACTCCTATCAAATTGATAA
ACGCACTTATATTCCTACTCAAAACAAAGCCATCCACCATATCGATTTAAACTTATGTACCGATCCGCACATACGCCTTT
CACTTGAAGCCCAAATGCTTTTTGGTCTACGTAGGGAGGAATCAATGAAATTTGTAGTCAGTGAGGCTTGGCATGGTGAT
TGTTTACATATTAAACCCAGTTGGACAAAAGGTGGTATTGGTCGATTGCTTAAAATTACTAATGAAGAGCAAATGAAATG
GCTGCAAACAGTCTGGAAACAGATAAGACGCGGTGAATCACTAATCCCTGCGGAAAGAACCTATAAACAGCATTTAAGTC
ATTATCAGCAACAAGCCAAGTTAATGGGAGTCTGTAAATTACATGGCCTGCGTCATGCTTATGCTCAACGCCGATATAAC
GAATTGACTAAAGAATTTGATTCTTTAAAAGTTGGATTAATCTGCCCAATAGCTGGTGGGAAAACTGCTAAAGAATTAAA
TCGTGAAGAAAAACAAATTGATAGGCAAGCACGGCAAATTATTAGCCGAGAACTCGGACATTCTCGCTTGAATATTACTA
AAACCTATCTAGGTTGA

Upstream 100 bases:

>100_bases
AATTCACAATTATCCTCTCAAATATCCCATTACCGTTTGTCCTTACTCATCATGGACGAAATGGGGTTGAAATCACGTAC
CACACTTTGGAGTTATCTCA

Downstream 100 bases:

>100_bases
AATTTTCAAAATCTTCAATCATAACATATTCACTCAATGCAATATTTTAACAATATTCAATGGGAAATATCATCAGCGAT
TATTAAGAAAATCTAAATTC

Product: hypothetical protein

Products: NA

Alternate protein names: Fis Family Transcriptional Regulator; Poisomerase/Recombinase/Integrase; DNA Breaking-Rejoining Protein; Tyrosine Recombinase; Phage Integrase Family Protein; Integrase Protein

Number of amino acids: Translated: 298; Mature: 297

Protein sequence:

>298_residues
MSNKLRSALYSVHQLTKQMQGYSFASKADMKHMINRCMKDLHELGFKVGHLNGLKPKHIYVLVEHWKKQGKSPATIKNYM
SKLRKLAYFLDKPKLVKTGNDSYQIDKRTYIPTQNKAIHHIDLNLCTDPHIRLSLEAQMLFGLRREESMKFVVSEAWHGD
CLHIKPSWTKGGIGRLLKITNEEQMKWLQTVWKQIRRGESLIPAERTYKQHLSHYQQQAKLMGVCKLHGLRHAYAQRRYN
ELTKEFDSLKVGLICPIAGGKTAKELNREEKQIDRQARQIISRELGHSRLNITKTYLG

Sequences:

>Translated_298_residues
MSNKLRSALYSVHQLTKQMQGYSFASKADMKHMINRCMKDLHELGFKVGHLNGLKPKHIYVLVEHWKKQGKSPATIKNYM
SKLRKLAYFLDKPKLVKTGNDSYQIDKRTYIPTQNKAIHHIDLNLCTDPHIRLSLEAQMLFGLRREESMKFVVSEAWHGD
CLHIKPSWTKGGIGRLLKITNEEQMKWLQTVWKQIRRGESLIPAERTYKQHLSHYQQQAKLMGVCKLHGLRHAYAQRRYN
ELTKEFDSLKVGLICPIAGGKTAKELNREEKQIDRQARQIISRELGHSRLNITKTYLG
>Mature_297_residues
SNKLRSALYSVHQLTKQMQGYSFASKADMKHMINRCMKDLHELGFKVGHLNGLKPKHIYVLVEHWKKQGKSPATIKNYMS
KLRKLAYFLDKPKLVKTGNDSYQIDKRTYIPTQNKAIHHIDLNLCTDPHIRLSLEAQMLFGLRREESMKFVVSEAWHGDC
LHIKPSWTKGGIGRLLKITNEEQMKWLQTVWKQIRRGESLIPAERTYKQHLSHYQQQAKLMGVCKLHGLRHAYAQRRYNE
LTKEFDSLKVGLICPIAGGKTAKELNREEKQIDRQARQIISRELGHSRLNITKTYLG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34728; Mature: 34597

Theoretical pI: Translated: 10.54; Mature: 10.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNKLRSALYSVHQLTKQMQGYSFASKADMKHMINRCMKDLHELGFKVGHLNGLKPKHIY
CCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCCCCCHHEE
VLVEHWKKQGKSPATIKNYMSKLRKLAYFLDKPKLVKTGNDSYQIDKRTYIPTQNKAIHH
EEEHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCCEEECCEEECCCCCCEEEE
IDLNLCTDPHIRLSLEAQMLFGLRREESMKFVVSEAWHGDCLHIKPSWTKGGIGRLLKIT
EEEEECCCCCEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHEEC
NEEQMKWLQTVWKQIRRGESLIPAERTYKQHLSHYQQQAKLMGVCKLHGLRHAYAQRRYN
CHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ELTKEFDSLKVGLICPIAGGKTAKELNREEKQIDRQARQIISRELGHSRLNITKTYLG
HHHHHHHCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEEHHCCC
>Mature Secondary Structure 
SNKLRSALYSVHQLTKQMQGYSFASKADMKHMINRCMKDLHELGFKVGHLNGLKPKHIY
CHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCCCCCHHEE
VLVEHWKKQGKSPATIKNYMSKLRKLAYFLDKPKLVKTGNDSYQIDKRTYIPTQNKAIHH
EEEHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCCEEECCEEECCCCCCEEEE
IDLNLCTDPHIRLSLEAQMLFGLRREESMKFVVSEAWHGDCLHIKPSWTKGGIGRLLKIT
EEEEECCCCCEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHEEC
NEEQMKWLQTVWKQIRRGESLIPAERTYKQHLSHYQQQAKLMGVCKLHGLRHAYAQRRYN
CHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ELTKEFDSLKVGLICPIAGGKTAKELNREEKQIDRQARQIISRELGHSRLNITKTYLG
HHHHHHHCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEEHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA