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The map label for this gene is 54295406

Identifier: 54295406

GI number: 54295406

Start: 2835267

End: 2835971

Strand: Direct

Name: 54295406

Synonym: lpl2492

Alternate gene names: NA

Gene position: 2835267-2835971 (Clockwise)

Preceding gene: 54295405

Following gene: 54295407

Centisome position: 84.74

GC content: 41.99

Gene sequence:

>705_bases
ATGGATTTCTTATTCGTCACCACATACGAACTGGACGCACTCAGCGAAATCCCTCTCATGCAAAGAGTGGTCTATCTCAT
GGGCATCCGCCCCTACATGGACAGAAAGACATTCATGGTCGGCATTAAACGAAAAATCAGCTACCAGTCCCTGAGAGAAA
CACTTTATGTCGCACCCATCAAAGGCGTAAAAACAGGCTGCCCTAGTCACCAACAAATGAAACGCGTAATTAAATCTCTG
GCACGCCAAGGCATCATAGAAATTCGCTCAACAGCCCAAAATCTCATTGTGAAATGTCTTCTGGCAAACCCATATGAGCC
GATAGAGATTGAAAATGAATCTCAGCCTGAACCAAATCCATCAAAGCAAGCAGAACAGAATCAACCATTACCATCAGAAA
ATCTGAAATCAATCAAACCCGAAAAATCATCCTACTCAAAATCAGGCTTTAAAGCGCAGCCCAGCAGTAACCTAAAAGAG
CTATACCAAAAATTCGAACAATTCTGGCAACTCTACCCCCTCCCTAGCTATAAAAATGAAGCATGGAAGCAATTTCAACA
AATTGATCCTGACGATCGTCTTTTTTCACAGATCATGGATGGATTACAAAAGCAGTTAACCAAAATTAATCGGCTAGGAG
CTTATTGGCCTTATCCTGCTAGTTGGTTGGGTCAAAAAAGTTGGTTTGACAATAAGCAAAGGTAG

Upstream 100 bases:

>100_bases
GAATGAATCAAGTTTAATGCATCTTGGTTATCTAAATATCATCGATTGATAGCGTTTGATATCAATTGAAATAAAAAACA
GGGTTAAAACAGGAGTAAAA

Downstream 100 bases:

>100_bases
TGAAGCTGACTAAATACCCATAATTGTTCCTACAAACTCAACTTAATTGCCAAGAATACATACGCCAACCCAGCCTCCTC
CTTATGTTTTTCATGCTTGA

Product: hypothetical protein

Products: NA

Alternate protein names: Vir Region Protein; Homolog Of LvrA Protein

Number of amino acids: Translated: 234; Mature: 234

Protein sequence:

>234_residues
MDFLFVTTYELDALSEIPLMQRVVYLMGIRPYMDRKTFMVGIKRKISYQSLRETLYVAPIKGVKTGCPSHQQMKRVIKSL
ARQGIIEIRSTAQNLIVKCLLANPYEPIEIENESQPEPNPSKQAEQNQPLPSENLKSIKPEKSSYSKSGFKAQPSSNLKE
LYQKFEQFWQLYPLPSYKNEAWKQFQQIDPDDRLFSQIMDGLQKQLTKINRLGAYWPYPASWLGQKSWFDNKQR

Sequences:

>Translated_234_residues
MDFLFVTTYELDALSEIPLMQRVVYLMGIRPYMDRKTFMVGIKRKISYQSLRETLYVAPIKGVKTGCPSHQQMKRVIKSL
ARQGIIEIRSTAQNLIVKCLLANPYEPIEIENESQPEPNPSKQAEQNQPLPSENLKSIKPEKSSYSKSGFKAQPSSNLKE
LYQKFEQFWQLYPLPSYKNEAWKQFQQIDPDDRLFSQIMDGLQKQLTKINRLGAYWPYPASWLGQKSWFDNKQR
>Mature_234_residues
MDFLFVTTYELDALSEIPLMQRVVYLMGIRPYMDRKTFMVGIKRKISYQSLRETLYVAPIKGVKTGCPSHQQMKRVIKSL
ARQGIIEIRSTAQNLIVKCLLANPYEPIEIENESQPEPNPSKQAEQNQPLPSENLKSIKPEKSSYSKSGFKAQPSSNLKE
LYQKFEQFWQLYPLPSYKNEAWKQFQQIDPDDRLFSQIMDGLQKQLTKINRLGAYWPYPASWLGQKSWFDNKQR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27364; Mature: 27364

Theoretical pI: Translated: 9.90; Mature: 9.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDFLFVTTYELDALSEIPLMQRVVYLMGIRPYMDRKTFMVGIKRKISYQSLRETLYVAPI
CCEEEEEEECHHHHHHCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
KGVKTGCPSHQQMKRVIKSLARQGIIEIRSTAQNLIVKCLLANPYEPIEIENESQPEPNP
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCC
SKQAEQNQPLPSENLKSIKPEKSSYSKSGFKAQPSSNLKELYQKFEQFWQLYPLPSYKNE
CCHHHHCCCCCCHHHHHCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHH
AWKQFQQIDPDDRLFSQIMDGLQKQLTKINRLGAYWPYPASWLGQKSWFDNKQR
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCHHCCCCCCC
>Mature Secondary Structure
MDFLFVTTYELDALSEIPLMQRVVYLMGIRPYMDRKTFMVGIKRKISYQSLRETLYVAPI
CCEEEEEEECHHHHHHCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
KGVKTGCPSHQQMKRVIKSLARQGIIEIRSTAQNLIVKCLLANPYEPIEIENESQPEPNP
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCC
SKQAEQNQPLPSENLKSIKPEKSSYSKSGFKAQPSSNLKELYQKFEQFWQLYPLPSYKNE
CCHHHHCCCCCCHHHHHCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHH
AWKQFQQIDPDDRLFSQIMDGLQKQLTKINRLGAYWPYPASWLGQKSWFDNKQR
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA