Click here to switch to the map view.

The map label for this gene is 54295341

Identifier: 54295341

GI number: 54295341

Start: 2757400

End: 2760228

Strand: Direct

Name: 54295341

Synonym: lpl2426

Alternate gene names: NA

Gene position: 2757400-2760228 (Clockwise)

Preceding gene: 54295339

Following gene: 54295342

Centisome position: 82.42

GC content: 34.71

Gene sequence:

>2829_bases
ATGACTAAAATATACTTATTAACTGCGCCTTTTGATGAAGAGGCAAAAACTGGTGATGGGCAATACGCGGCCTCTTTGGA
ATTGGGTTTTGCTGAAAATTACGAAGATATACCTTGTCAATGGTTAAAAAAAGACAAAGGTGATTACTCTATCCCATTTC
CAACAGGAACTACTTCCATTCCGGAAGATACTATACCAAGCGCGATAGTATTACAGCCAGTTGCTAACGAAAATACAGTA
ATAAGCGGTTATAAATTAAAAGATGCTGTTTCATCTCCAGAAAAAGCACAGGAAGTAAATAAAAAAACGGTTAGTCCCAG
AACACCAAAAATTATTGTAAAGCACGATAACAGCCTGCAATCACTTACAATAATGGATATTTACTCTCAAAAACCTATTC
AATTTGATGAGTCAAAAGTTGATGAAATCATTAGCTCTTTGGATACGAAAAAAGTCAAATTAGAAAAAGCTATAGAAGAT
AATAACGCTGATCTGAGTAAAATTAAGAAACAAAAATCCAAATTAGCGTATTTGACTAGATTATATAAGGAAAACAAAGA
GAATATTCAAGATTATTGCACCTTAAATGAATATATTGAGGCTCATTTATTTAATCCTAAATTTTTAAGCAGACATGAGA
AAGCACTCAATAATTTTAAGACACTTAAAAGCCAATTTACTGGCCCTGTCAATTTAAAAGAACTGGAAAAATTAACAGAT
AAACTGACTGGAATTAAAGAGTACAGCTACGATTTCCATAGTAACAGTTTACCCTATGATTTAGAGCACGATAAAAGTTT
CAGAAATTTTTATGATTTCGATGGATTAAAAGAATCTATCAAAAGCATTATCAAGGAATTAGAGGTGCTTAACAGCATTC
GTCAGGCTGTATCAGACAAGTACCCCAATAGCTTTAAAGCGCTAAATGAAACAGAAGAGCACGACGATAAATTAAAATTT
ATCAATATTATTTTCAACGATGGATTTAGCACCACTTATGACCAACAAACCTTTATCAAGGCCTTATCAGCTCTTGATAT
TGAAAAGGCAATTGACGCTTATACAAATGTTAAAATGAAACTGGAAAACACTCAGGATATTATCGCCAATAAAGAGGAGT
GTAGAAATAAGTTAATTTCAGAATTACAAACTTTAATTGCAAATAAACAAGAACCTTACCTCTCTGCAAATGAAAAGCTT
GGCGGTTTTTACAGCAAAAGAAAACTCTCCGCAAGTGAAGGGTTTCATTTAGCCTATCAGGCAAACCGACGTGACCCGAT
AAAACCTGAAGTGATTGAAAACATTATTACCAAAATGAAGCCCATTGATGAGGATACCCATCTTGATATTCATATTCGTC
CACCAGATTGCGGGGTCTTTATTACCCCAGAAGACATCAAAAAATTTCAAGAGGCAGGTATTAAAGTCAATATCACAATT
CATGAATATAAACAGAACTACACTCGACGTTATTTACAACAATATACTCATGATTTAATGCGCCAGGCAAACAGTGTGCA
ATTCTTTAATGCAGAAGATAGAGAAAATGCTATCATTGCCGCTACTTATGGTGATTGTGATAAGCGCAATACAACTGAAC
CGACTGGTGTTGCAAAAAAAATAAGAGAAGTCGGGGAAGATTTTGACTTAGATAAATACCCGGTTCAAAAATATGATTTA
AAAGGAAAATCAGGATTAACCGTTGCATCACAAAAATTAAGCACTGAACCGGATCATCCATTGGATGTAGTAGCCAAGCC
TCCCAATATCTTATCTTTTGGTACGATTCGTCCTGGCAAAGGGTTTGAAGAAGCGTTAAAGCTGGCTCAATTGACTAAAG
ATACCTCTCTTTCTATTTGTGAAAAAATAAACCGAGTACCTATTGTAAAACTGGCAGGTGACCCACAGGATAAAGAGTTA
ATGCAACAAATAGTTGTTGAAAGATTTGGTAAAGCAGCTGTCGAAAACTATCAAAAAACGCATGCCTATGACAATCAATT
TAATAATAGTCAGCGTAGAGATTATTGGAAAAATCTGGTTAGGGAGTTAAATGCAAAAGTTAAAGAAGAAGGTGCTGTTC
TTAATAATCCTTACATCGAAATATATCCTTGGTGTGAGCCGCATGAATTGCTGGATTTAAAGCAAAACTGTAAATACGTT
TGTCGAATGGACGACATGGGCATGAGAAACAATGGCTCAGCAATTATCAGTGTATTAGACGTTGGAGTCGTTTATACTAA
ATTTGGTTCTGTTACAGACGATATTTTTATTAAAGGCGGCAAATACGGCAATGCCGTTGATATTGGAGAATATCGTTATG
GGAAATACAGTCTGTTAAAAAAGGAAAAGGAATTTAAAGAACAGCATGAGGAAGAACCACTACCTAAGTGGCTAATCAAA
AATCCAGACTCTGCTTATAAGCGACAATCAGAATCGAGAGATCCAAAGGATATTTTAGACTCCATTGTCGCAAGAGAAGA
AAATCAATTAATATGTGATAATATAGAAGATTCCGATAATTATCGAACAGTAGTCGAAGCACAAAAGTTATTAAAAGAGC
GCTTTACACTTAAAAATGCTGTAGATCATTTATTAGAGAATATAGGACTCGGCCATTTAATTGCTCAAGAAGAGATCGAT
GAATTATTTGATACTGTTGATCCAGTACAAGCACAAATAGATAATTTAGATGTTCTTTCTGATATTAAGACACCACGTCT
GTGTTTATCACGCTCTTGCCCTGAATTAGGTTTTTTTGGCTCACGTCGTGGTGACTTGGCGACTAAACAAGAAAATAATA
AACTTAAAGAATCGATACTGGTATTTTGA

Upstream 100 bases:

>100_bases
TTTTATTCCTGATTATATTTAGTGATCCTATCTCTTAATGTTCATTTAATACTCTTAATGTAAGATATTCGTCATGATAA
AAATTTTACTACAGTAATTT

Downstream 100 bases:

>100_bases
TATGGTAAAAGGAAAACTTATGCCCAAGTTTATGAAGGATGTGCAAAAATTAATCCGTGATGAAGGCATCACAGATAATG
TGATTGTGACTCTATCCAGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 942; Mature: 941

Protein sequence:

>942_residues
MTKIYLLTAPFDEEAKTGDGQYAASLELGFAENYEDIPCQWLKKDKGDYSIPFPTGTTSIPEDTIPSAIVLQPVANENTV
ISGYKLKDAVSSPEKAQEVNKKTVSPRTPKIIVKHDNSLQSLTIMDIYSQKPIQFDESKVDEIISSLDTKKVKLEKAIED
NNADLSKIKKQKSKLAYLTRLYKENKENIQDYCTLNEYIEAHLFNPKFLSRHEKALNNFKTLKSQFTGPVNLKELEKLTD
KLTGIKEYSYDFHSNSLPYDLEHDKSFRNFYDFDGLKESIKSIIKELEVLNSIRQAVSDKYPNSFKALNETEEHDDKLKF
INIIFNDGFSTTYDQQTFIKALSALDIEKAIDAYTNVKMKLENTQDIIANKEECRNKLISELQTLIANKQEPYLSANEKL
GGFYSKRKLSASEGFHLAYQANRRDPIKPEVIENIITKMKPIDEDTHLDIHIRPPDCGVFITPEDIKKFQEAGIKVNITI
HEYKQNYTRRYLQQYTHDLMRQANSVQFFNAEDRENAIIAATYGDCDKRNTTEPTGVAKKIREVGEDFDLDKYPVQKYDL
KGKSGLTVASQKLSTEPDHPLDVVAKPPNILSFGTIRPGKGFEEALKLAQLTKDTSLSICEKINRVPIVKLAGDPQDKEL
MQQIVVERFGKAAVENYQKTHAYDNQFNNSQRRDYWKNLVRELNAKVKEEGAVLNNPYIEIYPWCEPHELLDLKQNCKYV
CRMDDMGMRNNGSAIISVLDVGVVYTKFGSVTDDIFIKGGKYGNAVDIGEYRYGKYSLLKKEKEFKEQHEEEPLPKWLIK
NPDSAYKRQSESRDPKDILDSIVAREENQLICDNIEDSDNYRTVVEAQKLLKERFTLKNAVDHLLENIGLGHLIAQEEID
ELFDTVDPVQAQIDNLDVLSDIKTPRLCLSRSCPELGFFGSRRGDLATKQENNKLKESILVF

Sequences:

>Translated_942_residues
MTKIYLLTAPFDEEAKTGDGQYAASLELGFAENYEDIPCQWLKKDKGDYSIPFPTGTTSIPEDTIPSAIVLQPVANENTV
ISGYKLKDAVSSPEKAQEVNKKTVSPRTPKIIVKHDNSLQSLTIMDIYSQKPIQFDESKVDEIISSLDTKKVKLEKAIED
NNADLSKIKKQKSKLAYLTRLYKENKENIQDYCTLNEYIEAHLFNPKFLSRHEKALNNFKTLKSQFTGPVNLKELEKLTD
KLTGIKEYSYDFHSNSLPYDLEHDKSFRNFYDFDGLKESIKSIIKELEVLNSIRQAVSDKYPNSFKALNETEEHDDKLKF
INIIFNDGFSTTYDQQTFIKALSALDIEKAIDAYTNVKMKLENTQDIIANKEECRNKLISELQTLIANKQEPYLSANEKL
GGFYSKRKLSASEGFHLAYQANRRDPIKPEVIENIITKMKPIDEDTHLDIHIRPPDCGVFITPEDIKKFQEAGIKVNITI
HEYKQNYTRRYLQQYTHDLMRQANSVQFFNAEDRENAIIAATYGDCDKRNTTEPTGVAKKIREVGEDFDLDKYPVQKYDL
KGKSGLTVASQKLSTEPDHPLDVVAKPPNILSFGTIRPGKGFEEALKLAQLTKDTSLSICEKINRVPIVKLAGDPQDKEL
MQQIVVERFGKAAVENYQKTHAYDNQFNNSQRRDYWKNLVRELNAKVKEEGAVLNNPYIEIYPWCEPHELLDLKQNCKYV
CRMDDMGMRNNGSAIISVLDVGVVYTKFGSVTDDIFIKGGKYGNAVDIGEYRYGKYSLLKKEKEFKEQHEEEPLPKWLIK
NPDSAYKRQSESRDPKDILDSIVAREENQLICDNIEDSDNYRTVVEAQKLLKERFTLKNAVDHLLENIGLGHLIAQEEID
ELFDTVDPVQAQIDNLDVLSDIKTPRLCLSRSCPELGFFGSRRGDLATKQENNKLKESILVF
>Mature_941_residues
TKIYLLTAPFDEEAKTGDGQYAASLELGFAENYEDIPCQWLKKDKGDYSIPFPTGTTSIPEDTIPSAIVLQPVANENTVI
SGYKLKDAVSSPEKAQEVNKKTVSPRTPKIIVKHDNSLQSLTIMDIYSQKPIQFDESKVDEIISSLDTKKVKLEKAIEDN
NADLSKIKKQKSKLAYLTRLYKENKENIQDYCTLNEYIEAHLFNPKFLSRHEKALNNFKTLKSQFTGPVNLKELEKLTDK
LTGIKEYSYDFHSNSLPYDLEHDKSFRNFYDFDGLKESIKSIIKELEVLNSIRQAVSDKYPNSFKALNETEEHDDKLKFI
NIIFNDGFSTTYDQQTFIKALSALDIEKAIDAYTNVKMKLENTQDIIANKEECRNKLISELQTLIANKQEPYLSANEKLG
GFYSKRKLSASEGFHLAYQANRRDPIKPEVIENIITKMKPIDEDTHLDIHIRPPDCGVFITPEDIKKFQEAGIKVNITIH
EYKQNYTRRYLQQYTHDLMRQANSVQFFNAEDRENAIIAATYGDCDKRNTTEPTGVAKKIREVGEDFDLDKYPVQKYDLK
GKSGLTVASQKLSTEPDHPLDVVAKPPNILSFGTIRPGKGFEEALKLAQLTKDTSLSICEKINRVPIVKLAGDPQDKELM
QQIVVERFGKAAVENYQKTHAYDNQFNNSQRRDYWKNLVRELNAKVKEEGAVLNNPYIEIYPWCEPHELLDLKQNCKYVC
RMDDMGMRNNGSAIISVLDVGVVYTKFGSVTDDIFIKGGKYGNAVDIGEYRYGKYSLLKKEKEFKEQHEEEPLPKWLIKN
PDSAYKRQSESRDPKDILDSIVAREENQLICDNIEDSDNYRTVVEAQKLLKERFTLKNAVDHLLENIGLGHLIAQEEIDE
LFDTVDPVQAQIDNLDVLSDIKTPRLCLSRSCPELGFFGSRRGDLATKQENNKLKESILVF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 107841; Mature: 107710

Theoretical pI: Translated: 5.60; Mature: 5.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKIYLLTAPFDEEAKTGDGQYAASLELGFAENYEDIPCQWLKKDKGDYSIPFPTGTTSI
CCEEEEEECCCCCCCCCCCCCEEEEEEECCCCCCCCCCHHHHHCCCCCEECCCCCCCCCC
PEDTIPSAIVLQPVANENTVISGYKLKDAVSSPEKAQEVNKKTVSPRTPKIIVKHDNSLQ
CCCCCCCEEEEEECCCCCEEEECEEHHHHHCCCHHHHHHHHHCCCCCCCEEEEEECCCCC
SLTIMDIYSQKPIQFDESKVDEIISSLDTKKVKLEKAIEDNNADLSKIKKQKSKLAYLTR
EEEEEEHHCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
LYKENKENIQDYCTLNEYIEAHLFNPKFLSRHEKALNNFKTLKSQFTGPVNLKELEKLTD
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
KLTGIKEYSYDFHSNSLPYDLEHDKSFRNFYDFDGLKESIKSIIKELEVLNSIRQAVSDK
HHHCHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
YPNSFKALNETEEHDDKLKFINIIFNDGFSTTYDQQTFIKALSALDIEKAIDAYTNVKMK
CCCHHHHCCCCHHHCCCEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEE
LENTQDIIANKEECRNKLISELQTLIANKQEPYLSANEKLGGFYSKRKLSASEGFHLAYQ
ECCCHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHCCHHHHHHCCCCCCEEEEEE
ANRRDPIKPEVIENIITKMKPIDEDTHLDIHIRPPDCGVFITPEDIKKFQEAGIKVNITI
CCCCCCCCHHHHHHHHHHCCCCCCCCEEEEEEECCCCCEEECHHHHHHHHHCCCEEEEEE
HEYKQNYTRRYLQQYTHDLMRQANSVQFFNAEDRENAIIAATYGDCDKRNTTEPTGVAKK
HHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCEEEEEECCCCCCCCCCCHHHHHHH
IREVGEDFDLDKYPVQKYDLKGKSGLTVASQKLSTEPDHPLDVVAKPPNILSFGTIRPGK
HHHHCCCCCCCCCCCHHCCCCCCCCCEEHHHHCCCCCCCCCEEEECCCCCEEECCCCCCC
GFEEALKLAQLTKDTSLSICEKINRVPIVKLAGDPQDKELMQQIVVERFGKAAVENYQKT
CHHHHHHHHHHHCCCHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHH
HAYDNQFNNSQRRDYWKNLVRELNAKVKEEGAVLNNPYIEIYPWCEPHELLDLKQNCKYV
HHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCEECCCCEEEECCCCCHHHHHHHHCCCEE
CRMDDMGMRNNGSAIISVLDVGVVYTKFGSVTDDIFIKGGKYGNAVDIGEYRYGKYSLLK
EEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCEEECCCCCCCHHHHHH
KEKEFKEQHEEEPLPKWLIKNPDSAYKRQSESRDPKDILDSIVAREENQLICDNIEDSDN
HHHHHHHHHHCCCCCHHHHCCCCHHHHHHHCCCCHHHHHHHHHHCCCCCEEECCCCCCCC
YRTVVEAQKLLKERFTLKNAVDHLLENIGLGHLIAQEEIDELFDTVDPVQAQIDNLDVLS
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHCCCHHHH
DIKTPRLCLSRSCPELGFFGSRRGDLATKQENNKLKESILVF
HCCCHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCC
>Mature Secondary Structure 
TKIYLLTAPFDEEAKTGDGQYAASLELGFAENYEDIPCQWLKKDKGDYSIPFPTGTTSI
CEEEEEECCCCCCCCCCCCCEEEEEEECCCCCCCCCCHHHHHCCCCCEECCCCCCCCCC
PEDTIPSAIVLQPVANENTVISGYKLKDAVSSPEKAQEVNKKTVSPRTPKIIVKHDNSLQ
CCCCCCCEEEEEECCCCCEEEECEEHHHHHCCCHHHHHHHHHCCCCCCCEEEEEECCCCC
SLTIMDIYSQKPIQFDESKVDEIISSLDTKKVKLEKAIEDNNADLSKIKKQKSKLAYLTR
EEEEEEHHCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
LYKENKENIQDYCTLNEYIEAHLFNPKFLSRHEKALNNFKTLKSQFTGPVNLKELEKLTD
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
KLTGIKEYSYDFHSNSLPYDLEHDKSFRNFYDFDGLKESIKSIIKELEVLNSIRQAVSDK
HHHCHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
YPNSFKALNETEEHDDKLKFINIIFNDGFSTTYDQQTFIKALSALDIEKAIDAYTNVKMK
CCCHHHHCCCCHHHCCCEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEE
LENTQDIIANKEECRNKLISELQTLIANKQEPYLSANEKLGGFYSKRKLSASEGFHLAYQ
ECCCHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHCCHHHHHHCCCCCCEEEEEE
ANRRDPIKPEVIENIITKMKPIDEDTHLDIHIRPPDCGVFITPEDIKKFQEAGIKVNITI
CCCCCCCCHHHHHHHHHHCCCCCCCCEEEEEEECCCCCEEECHHHHHHHHHCCCEEEEEE
HEYKQNYTRRYLQQYTHDLMRQANSVQFFNAEDRENAIIAATYGDCDKRNTTEPTGVAKK
HHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCEEEEEECCCCCCCCCCCHHHHHHH
IREVGEDFDLDKYPVQKYDLKGKSGLTVASQKLSTEPDHPLDVVAKPPNILSFGTIRPGK
HHHHCCCCCCCCCCCHHCCCCCCCCCEEHHHHCCCCCCCCCEEEECCCCCEEECCCCCCC
GFEEALKLAQLTKDTSLSICEKINRVPIVKLAGDPQDKELMQQIVVERFGKAAVENYQKT
CHHHHHHHHHHHCCCHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHH
HAYDNQFNNSQRRDYWKNLVRELNAKVKEEGAVLNNPYIEIYPWCEPHELLDLKQNCKYV
HHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCEECCCCEEEECCCCCHHHHHHHHCCCEE
CRMDDMGMRNNGSAIISVLDVGVVYTKFGSVTDDIFIKGGKYGNAVDIGEYRYGKYSLLK
EEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCEEECCCCCCCHHHHHH
KEKEFKEQHEEEPLPKWLIKNPDSAYKRQSESRDPKDILDSIVAREENQLICDNIEDSDN
HHHHHHHHHHCCCCCHHHHCCCCHHHHHHHCCCCHHHHHHHHHHCCCCCEEECCCCCCCC
YRTVVEAQKLLKERFTLKNAVDHLLENIGLGHLIAQEEIDELFDTVDPVQAQIDNLDVLS
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHCCCHHHH
DIKTPRLCLSRSCPELGFFGSRRGDLATKQENNKLKESILVF
HCCCHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA