Click here to switch to the map view.

The map label for this gene is 54295336

Identifier: 54295336

GI number: 54295336

Start: 2752807

End: 2753034

Strand: Direct

Name: 54295336

Synonym: lpl2421

Alternate gene names: NA

Gene position: 2752807-2753034 (Clockwise)

Preceding gene: 54295335

Following gene: 54295337

Centisome position: 82.28

GC content: 35.53

Gene sequence:

>228_bases
ATGGGCAAATTCCTCGTATTTATTGGATCAATATTATTATTTTTTTCTTCCGTTTTAGCTGGAGATATCCCAGAAGTAGA
CATACAAGATCAACAGTCGGATCAGGAGTTATGTGCCCAAAAATTTTATAATCAATGCATCAACAAGTGCGAAAAAACAA
ATTATGGCGACTGTACCCAAGCCTGTGAGGAAAATGCTAAAAATCAATGTCTTTACGCAGGTGAATAA

Upstream 100 bases:

>100_bases
ATTTTTCGCCTTGACCTTGGAGTTTTTCCTAAGTCCTATTATATTTAATAGTATAATATTTAATCTATTTTGGATTAAAT
AAACCAGGGAAAACGCGATC

Downstream 100 bases:

>100_bases
GAATGGTTTGCGTTGAGGCAATTAAATTAAATCCTATAAATTTTAATAGTAAAAACATTTACTCATTTAAAATAAACTGT
ATTTCGTCATTTCATGTTAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 75; Mature: 74

Protein sequence:

>75_residues
MGKFLVFIGSILLFFSSVLAGDIPEVDIQDQQSDQELCAQKFYNQCINKCEKTNYGDCTQACEENAKNQCLYAGE

Sequences:

>Translated_75_residues
MGKFLVFIGSILLFFSSVLAGDIPEVDIQDQQSDQELCAQKFYNQCINKCEKTNYGDCTQACEENAKNQCLYAGE
>Mature_74_residues
GKFLVFIGSILLFFSSVLAGDIPEVDIQDQQSDQELCAQKFYNQCINKCEKTNYGDCTQACEENAKNQCLYAGE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8411; Mature: 8279

Theoretical pI: Translated: 3.98; Mature: 3.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

8.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
9.3 %Cys+Met (Translated Protein)
8.1 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
8.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGKFLVFIGSILLFFSSVLAGDIPEVDIQDQQSDQELCAQKFYNQCINKCEKTNYGDCTQ
CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHH
ACEENAKNQCLYAGE
HHHHCCCCCCCCCCC
>Mature Secondary Structure 
GKFLVFIGSILLFFSSVLAGDIPEVDIQDQQSDQELCAQKFYNQCINKCEKTNYGDCTQ
CHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHH
ACEENAKNQCLYAGE
HHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA