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The map label for this gene is sdbB

Identifier: 54295317

GI number: 54295317

Start: 2731734

End: 2733080

Strand: Direct

Name: sdbB

Synonym: lpl2402

Alternate gene names: NA

Gene position: 2731734-2733080 (Clockwise)

Preceding gene: 54295314

Following gene: 54295319

Centisome position: 81.65

GC content: 38.68

Gene sequence:

>1347_bases
ATGGCCAAAACTATTACAAAAGACAGTTTTTTTCATAGTCGTTTACAACAATTTGTAGCTAATTCCCTTTTTCCAGCAGG
GGCCGGTGATTGGTATAAAAACAAAGGCTACGGAAAAAAGGGCGAAGTTGATGACGAAGCTCCTTTTAGAGATTTCGTTG
AAAAACAAAAAACCGATAAAAAATCACACTATTATAAAGAGTTTCAAGGCCTGGATTTAAGTCTGAAGAAAGTGAAAACA
AAGCTGGTTTCTGGTGAATCCTGTCAGTTAGAAGTCATGAAATGCCAACCAGAGTCTCATGAACCTAAAAAGCCCGGCAC
CGGAAAACACATTGTCTATTTTCCCGGAGCAAATACTTATTACCAAGCCTGTTTTCGTGATATCAGCACAGCTTGCAAAG
AAACTGGAGCAACAGTACATGCTTTTAATTTTCCAGGAACAGGACTTAGTTCAGGAAAGGTGAGAGAGGCAAATGACTTA
ATCAATGCCGGTATTTCTGTGGTATCTTCTTTGATTAAACAAGGCGTGCACCCCGATGATATTATTTTACAGGGCGATTG
CTACGGAGCAAGCATTGCATTAGAGGTAAAAAAGCAATTAGAAGACCAGGCAGACATCAAAGTTCGTGCAATCATGAACA
ATGTTTTCAAGTCATTTAAAGCAGCCGTTTGCGATATGATTACCCAATCTCCATGGCTACCTAATATATTAAAAAGCATT
GTTAAAAGATTGTTAGAATTTACTGGCTGGCATGTTACTCCGGGAAAAAAATATAAACATGCCGATCCTTACCAATGTCA
TATTCAACACTTGGGAGATCAAACGCTAGAATCGTCAACATTATCAGGTAAAGTCAGCAAATATCATCATGAAATACAAA
CTGGGCAAACCAAATCTCAAAAAAGGGCCCCCATTACCGATACTTGTCCAGAAGAGTATCGAGAGGATCGCGATGAGTTG
GATAGGAAACATTATGTTCGAGTCAAAGAAAGCGCTAAAGAACGCCTTGCTTCCAAATTTGGAGTAGATAAATTTGGAAG
GGTCAATGCTCACTTTGCCGATTTATGCGAACTGGAAATGTTGGATGGGCAATCGGTGTATCAAGGCTTTGTCAATGACT
ATATTGCCAGATCGAATGCTTATATCGAAAAACACCCTCAAAAAGGTATTAAAGAAATTCAGGATGATTTACGTAAATTA
CATTACCTGCAGCCAGCTGATTCAATAGAAATTACTGAAGATGAGGCCCAGGATTTTAACACGGTAGTTGATCTTATTAC
AGATGAACAACAACTAAGGCATGATCGAGTCAACGACAATACAATAGGTAAAAGCATCTCTATGTAA

Upstream 100 bases:

>100_bases
CCGAATGTACTTTATTAATACTCTCTTAAGTTTTTTCTGCTAAATTTATGCTAAATTAAAAAAATACACTGACTTTATTT
TGCTCACACTGGGGAATTAA

Downstream 100 bases:

>100_bases
TTGAAAGTACTGACTGGCAGGACGATTCAGCTTTTGCCAGTCAGTTGCCTCGAACAAAATCCTTGTGCTTCAACGCCAAG
GGCACTATTAAATTTACTGG

Product: SdbB protein (putative substrate of the Dot/Icm system)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 448; Mature: 447

Protein sequence:

>448_residues
MAKTITKDSFFHSRLQQFVANSLFPAGAGDWYKNKGYGKKGEVDDEAPFRDFVEKQKTDKKSHYYKEFQGLDLSLKKVKT
KLVSGESCQLEVMKCQPESHEPKKPGTGKHIVYFPGANTYYQACFRDISTACKETGATVHAFNFPGTGLSSGKVREANDL
INAGISVVSSLIKQGVHPDDIILQGDCYGASIALEVKKQLEDQADIKVRAIMNNVFKSFKAAVCDMITQSPWLPNILKSI
VKRLLEFTGWHVTPGKKYKHADPYQCHIQHLGDQTLESSTLSGKVSKYHHEIQTGQTKSQKRAPITDTCPEEYREDRDEL
DRKHYVRVKESAKERLASKFGVDKFGRVNAHFADLCELEMLDGQSVYQGFVNDYIARSNAYIEKHPQKGIKEIQDDLRKL
HYLQPADSIEITEDEAQDFNTVVDLITDEQQLRHDRVNDNTIGKSISM

Sequences:

>Translated_448_residues
MAKTITKDSFFHSRLQQFVANSLFPAGAGDWYKNKGYGKKGEVDDEAPFRDFVEKQKTDKKSHYYKEFQGLDLSLKKVKT
KLVSGESCQLEVMKCQPESHEPKKPGTGKHIVYFPGANTYYQACFRDISTACKETGATVHAFNFPGTGLSSGKVREANDL
INAGISVVSSLIKQGVHPDDIILQGDCYGASIALEVKKQLEDQADIKVRAIMNNVFKSFKAAVCDMITQSPWLPNILKSI
VKRLLEFTGWHVTPGKKYKHADPYQCHIQHLGDQTLESSTLSGKVSKYHHEIQTGQTKSQKRAPITDTCPEEYREDRDEL
DRKHYVRVKESAKERLASKFGVDKFGRVNAHFADLCELEMLDGQSVYQGFVNDYIARSNAYIEKHPQKGIKEIQDDLRKL
HYLQPADSIEITEDEAQDFNTVVDLITDEQQLRHDRVNDNTIGKSISM
>Mature_447_residues
AKTITKDSFFHSRLQQFVANSLFPAGAGDWYKNKGYGKKGEVDDEAPFRDFVEKQKTDKKSHYYKEFQGLDLSLKKVKTK
LVSGESCQLEVMKCQPESHEPKKPGTGKHIVYFPGANTYYQACFRDISTACKETGATVHAFNFPGTGLSSGKVREANDLI
NAGISVVSSLIKQGVHPDDIILQGDCYGASIALEVKKQLEDQADIKVRAIMNNVFKSFKAAVCDMITQSPWLPNILKSIV
KRLLEFTGWHVTPGKKYKHADPYQCHIQHLGDQTLESSTLSGKVSKYHHEIQTGQTKSQKRAPITDTCPEEYREDRDELD
RKHYVRVKESAKERLASKFGVDKFGRVNAHFADLCELEMLDGQSVYQGFVNDYIARSNAYIEKHPQKGIKEIQDDLRKLH
YLQPADSIEITEDEAQDFNTVVDLITDEQQLRHDRVNDNTIGKSISM

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 50695; Mature: 50564

Theoretical pI: Translated: 7.62; Mature: 7.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKTITKDSFFHSRLQQFVANSLFPAGAGDWYKNKGYGKKGEVDDEAPFRDFVEKQKTDK
CCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCH
KSHYYKEFQGLDLSLKKVKTKLVSGESCQLEVMKCQPESHEPKKPGTGKHIVYFPGANTY
HHHHHHHHCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCEEEEECCCCHH
YQACFRDISTACKETGATVHAFNFPGTGLSSGKVREANDLINAGISVVSSLIKQGVHPDD
HHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC
IILQGDCYGASIALEVKKQLEDQADIKVRAIMNNVFKSFKAAVCDMITQSPWLPNILKSI
EEEECCCCCCHHHHHHHHHCCHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
VKRLLEFTGWHVTPGKKYKHADPYQCHIQHLGDQTLESSTLSGKVSKYHHEIQTGQTKSQ
HHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCC
KRAPITDTCPEEYREDRDELDRKHYVRVKESAKERLASKFGVDKFGRVNAHFADLCELEM
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
LDGQSVYQGFVNDYIARSNAYIEKHPQKGIKEIQDDLRKLHYLQPADSIEITEDEAQDFN
CCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECHHHHHHHH
TVVDLITDEQQLRHDRVNDNTIGKSISM
HHHHHHCCHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure 
AKTITKDSFFHSRLQQFVANSLFPAGAGDWYKNKGYGKKGEVDDEAPFRDFVEKQKTDK
CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCH
KSHYYKEFQGLDLSLKKVKTKLVSGESCQLEVMKCQPESHEPKKPGTGKHIVYFPGANTY
HHHHHHHHCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCEEEEECCCCHH
YQACFRDISTACKETGATVHAFNFPGTGLSSGKVREANDLINAGISVVSSLIKQGVHPDD
HHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC
IILQGDCYGASIALEVKKQLEDQADIKVRAIMNNVFKSFKAAVCDMITQSPWLPNILKSI
EEEECCCCCCHHHHHHHHHCCHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
VKRLLEFTGWHVTPGKKYKHADPYQCHIQHLGDQTLESSTLSGKVSKYHHEIQTGQTKSQ
HHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCC
KRAPITDTCPEEYREDRDELDRKHYVRVKESAKERLASKFGVDKFGRVNAHFADLCELEM
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
LDGQSVYQGFVNDYIARSNAYIEKHPQKGIKEIQDDLRKLHYLQPADSIEITEDEAQDFN
CCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECHHHHHHHH
TVVDLITDEQQLRHDRVNDNTIGKSISM
HHHHHHCCHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA