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The map label for this gene is yfdH [C]

Identifier: 54295313

GI number: 54295313

Start: 2728275

End: 2729234

Strand: Direct

Name: yfdH [C]

Synonym: lpl2398

Alternate gene names: 54295313

Gene position: 2728275-2729234 (Clockwise)

Preceding gene: 54295300

Following gene: 54295314

Centisome position: 81.55

GC content: 40.52

Gene sequence:

>960_bases
ATGTCTAAAACTGCAAAACATAAAAAACTCATCTCTTGCGTTGTTCCTGTTTTTAATGAGGAAGTACTTATTGCTGAATT
CATCGCCGCATTGGATAAAACTCTTAGGAGCATCACTTATCCTTATGAAATTCTACTGATAGATGATGGAAGCCAGGATA
ATACTTTCGCAATCATTCAAACATTAAGAAAAGAGTATTCTCTTCGTTGCATTCGTTTCAGTAGAAATTTCGGCAAGGAA
AAAGCGCTCAGTGCAGGATTGGATCATGCGCGCGGAGATGCTGTGATCTTATTGGATAGTGATTTCCAACACCCGCTTGA
ATTATTAAGCGAATTTATCGCCAAATGGGAAGACGGTTATGACATGGTTTATGCCGTGAGACAAAATCGTTCTGACGAAT
CATGGCTAAAACGAGTTTGCGCTAAAATTTTTTATCATCTCACTTCCAAAATAAACCGTATTAATATCCCGGCAAATGCA
GGTGACTTTAGATTGCTCGATAGAAAAATTGTTAATGCACTACAAACCCTTCCCGAACGTAATCGCTTTATGAAGGGTTT
ATACAGCTGGGTCGGTTTTAAACAAATAGCCGTGCCATTTAATGTACACCCCCGTAAATCGGGTAGTTCACAATGGAGTT
TTTATTCTTTACTGGATTTGGCAATTACTGGCATAACATCGTTTACTGCTTTTCCTCTAAGAATGATTTCCCTGGGAGGA
ATGGGGGTGGCAGCCCTGGCGCTTATTTATGCCGCCTGGATTGTATTAAGCACGCTAATCTTTGGCATTGAAACCCCTGG
CTGGGCAACCATAGTCACTGCAATCAGTTTTTTTGGCGGATTGCAATTATTTGCTATCGGTGTAGTTGGCGAATACATAG
GCCGTGTTTTTGATGAAGTGAAACACAGACCCCACTATATTATCGATGAGGAGTCCAGTTTTGATGACCACTGCTCTTAA

Upstream 100 bases:

>100_bases
AATACTTTCACTGTTTTTATAACCCTCAATGGACTCAACTTCCAAGAGTAGGTTAACATATGAAGCTATCTATCTTTTGT
CTTGTACATTAATACTCAGT

Downstream 100 bases:

>100_bases
ATTATCCCATCGATTAATTTATTTTACTGGAGTAGGGATCTGCGCTGCTATCGTACATCTTTTGATCGTGTTCAATTTAG
TCAATTTTCTAAATCTTCAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 319; Mature: 318

Protein sequence:

>319_residues
MSKTAKHKKLISCVVPVFNEEVLIAEFIAALDKTLRSITYPYEILLIDDGSQDNTFAIIQTLRKEYSLRCIRFSRNFGKE
KALSAGLDHARGDAVILLDSDFQHPLELLSEFIAKWEDGYDMVYAVRQNRSDESWLKRVCAKIFYHLTSKINRINIPANA
GDFRLLDRKIVNALQTLPERNRFMKGLYSWVGFKQIAVPFNVHPRKSGSSQWSFYSLLDLAITGITSFTAFPLRMISLGG
MGVAALALIYAAWIVLSTLIFGIETPGWATIVTAISFFGGLQLFAIGVVGEYIGRVFDEVKHRPHYIIDEESSFDDHCS

Sequences:

>Translated_319_residues
MSKTAKHKKLISCVVPVFNEEVLIAEFIAALDKTLRSITYPYEILLIDDGSQDNTFAIIQTLRKEYSLRCIRFSRNFGKE
KALSAGLDHARGDAVILLDSDFQHPLELLSEFIAKWEDGYDMVYAVRQNRSDESWLKRVCAKIFYHLTSKINRINIPANA
GDFRLLDRKIVNALQTLPERNRFMKGLYSWVGFKQIAVPFNVHPRKSGSSQWSFYSLLDLAITGITSFTAFPLRMISLGG
MGVAALALIYAAWIVLSTLIFGIETPGWATIVTAISFFGGLQLFAIGVVGEYIGRVFDEVKHRPHYIIDEESSFDDHCS
>Mature_318_residues
SKTAKHKKLISCVVPVFNEEVLIAEFIAALDKTLRSITYPYEILLIDDGSQDNTFAIIQTLRKEYSLRCIRFSRNFGKEK
ALSAGLDHARGDAVILLDSDFQHPLELLSEFIAKWEDGYDMVYAVRQNRSDESWLKRVCAKIFYHLTSKINRINIPANAG
DFRLLDRKIVNALQTLPERNRFMKGLYSWVGFKQIAVPFNVHPRKSGSSQWSFYSLLDLAITGITSFTAFPLRMISLGGM
GVAALALIYAAWIVLSTLIFGIETPGWATIVTAISFFGGLQLFAIGVVGEYIGRVFDEVKHRPHYIIDEESSFDDHCS

Specific function: Involved In O Antigen Modification. Catalyzes The Transfer Of The Glucose Residue From Udp-Glucose To A Lipid Carrier (By Similarity). [C]

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family. GtrB subfamily [H]

Homologues:

Organism=Homo sapiens, GI4503363, Length=171, Percent_Identity=29.8245614035088, Blast_Score=66, Evalue=4e-11,
Organism=Escherichia coli, GI1788692, Length=299, Percent_Identity=47.1571906354515, Blast_Score=270, Evalue=9e-74,
Organism=Escherichia coli, GI1788588, Length=309, Percent_Identity=35.2750809061489, Blast_Score=183, Evalue=1e-47,
Organism=Drosophila melanogaster, GI24585265, Length=176, Percent_Identity=27.8409090909091, Blast_Score=65, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: 2.4.1.- [C]

Molecular weight: Translated: 36046; Mature: 35915

Theoretical pI: Translated: 7.99; Mature: 7.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKTAKHKKLISCVVPVFNEEVLIAEFIAALDKTLRSITYPYEILLIDDGSQDNTFAIIQ
CCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHH
TLRKEYSLRCIRFSRNFGKEKALSAGLDHARGDAVILLDSDFQHPLELLSEFIAKWEDGY
HHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCC
DMVYAVRQNRSDESWLKRVCAKIFYHLTSKINRINIPANAGDFRLLDRKIVNALQTLPER
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCHHHHHHHHHHHHHHCHHH
NRFMKGLYSWVGFKQIAVPFNVHPRKSGSSQWSFYSLLDLAITGITSFTAFPLRMISLGG
HHHHHHHHHHHCHHHEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
MGVAALALIYAAWIVLSTLIFGIETPGWATIVTAISFFGGLQLFAIGVVGEYIGRVFDEV
CHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KHRPHYIIDEESSFDDHCS
CCCCCEEECCCCCCCCCCC
>Mature Secondary Structure 
SKTAKHKKLISCVVPVFNEEVLIAEFIAALDKTLRSITYPYEILLIDDGSQDNTFAIIQ
CCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHH
TLRKEYSLRCIRFSRNFGKEKALSAGLDHARGDAVILLDSDFQHPLELLSEFIAKWEDGY
HHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCC
DMVYAVRQNRSDESWLKRVCAKIFYHLTSKINRINIPANAGDFRLLDRKIVNALQTLPER
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCHHHHHHHHHHHHHHCHHH
NRFMKGLYSWVGFKQIAVPFNVHPRKSGSSQWSFYSLLDLAITGITSFTAFPLRMISLGG
HHHHHHHHHHHCHHHEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
MGVAALALIYAAWIVLSTLIFGIETPGWATIVTAISFFGGLQLFAIGVVGEYIGRVFDEV
CHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KHRPHYIIDEESSFDDHCS
CCCCCEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]