| Definition | Legionella pneumophila str. Lens, complete genome. |
|---|---|
| Accession | NC_006369 |
| Length | 3,345,687 |
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The map label for this gene is katB [H]
Identifier: 54295230
GI number: 54295230
Start: 2635031
End: 2637196
Strand: Direct
Name: katB [H]
Synonym: lpl2313
Alternate gene names: 54295230
Gene position: 2635031-2637196 (Clockwise)
Preceding gene: 54295227
Following gene: 54295233
Centisome position: 78.76
GC content: 48.61
Gene sequence:
>2166_bases ATGGATGGAAAAGTTGGGAATACAGCAACCGGGTGTCCGGTGATGCATGGCGGGATGACATCTGCAGAAACATCCAACAC GGCATGGTGGCCCAATGCCTTGAACTTGGATATATTGCATCAGCATGACACCAAGACAAATCCAATGGGAAAAAATTTCA ACTATCGTGAAGAAGTCAAGAAACTGGATTTTGAGGCGCTCAAAAAGGATTTGCACGCTTTGATGACTGACAGCCAGCCA TGGTGGCCTGCTGATTGGGGACACTACGGTGGTTTAATGATTCGTATGTCCTGGCATGCTGCAGGTTCTTATCGTGTTGC GGATGGCCGCGGCGGTGCTGGTACAGGCAATCAACGCTTTGCTCCATTGAATTCCTGGCCTGACAATGTGAACCTGGATA AAGCACGTCGCTTATTATGGCCCATCAAGAAAAAATATGGCAACAAGATTAGTTGGGCAGACTTGATTGCCCTGGCTGGC ACCATCGCTTATGAGTCAATGGGACTAAAAACTTTCGGTTTTGGTTTTGGCCGCGAAGACATTTGGCATCCCGAAAAAGA TGTTTATTGGGGTTCAGAACAAGAATGGTTAGGCGCCAAGCGTTACGATGGCAAAAGCCGTGAATCTCTGGAAAACCCGC TGGCAGCAGTACAAATGGGATTAATTTATGTAAATCCCGAAGGAGTGAATGGTCAACCTGACCCGCTGCGCACAGCGCAG GATGTTCGTGTAACCTTCGGACGCATGGCTATGAACGATGAGGAAACCGTTGCTCTGACTGCCGGAGGACATACTGTTGG CAAATGTCATGGTAATGGCAATGCAAAATTTTTGGGCCCCGATCCCGAAGCCGCTGATGTTGAGGACCAAGGCCTTGGCT GGATTAACAAAACCACCAGAGGCATCGGCCGTAATACCGTTTCAAGCGGTATTGAAGGCGCATGGACGACTCACCCTACC CAGTGGGACAATGGCTACTTCTATTTATTGCTGAATTACGATTGGGAACTGAAAAAAAGCCCCGCCGGTGCCTGGCAATG GGAGCCCATCCATATTAAGGAAGAAGATAAACCAGTAGATGTTGAAGACCCTGCCATCCGGCGCAATCCGATCATGACTG ATGCTGACATGGCAATCAAAATGGATCCTGTTTATCGTAAAATCGCCGAGCGCTTTTACAAAGATCCCGACTATTTTGCA GAAGTTTTTGCACGAGCCTGGTTTAAACTGACTCATCGCGATATGGGGCCGAAGACGCGCTACATTGGCCCTGATGTTCC TAAAGAAGATTTGATTTGGCAAGATCCGGTGCCTGCTGGTAACAGGGCATATGATATTGCTGCCGCCAAAGCAAAAATTG CGGCCAGCAATCTGACCATCGGTGAAATGGTTTCTACTGCATGGGACAGCGCGCGCACTTTTCGCGGCTCAGATAAGCGC GGTGGTGCGAACGGAGCACGTATACGACTAAAGCCACAAAAAGACTGGGAAGGCAATGAGCCACAACGCCTGACTAAAGT CTTGCGAATTCTTGAAAGCATCGCTGCTGATACAGGCGCAAGCGTGGCAGATGTGATTGTACTTGCCGGAAATGTCGGTA TCGAGAAGGCTGCCAAGGCAGCTGGCTTTGACATTATCGTTCCCTTTGCTCCTGGCCGTGGGGATGCAACCGATGACATG ACGGATGCAGAATCCTTTGACGTTCTGGAACCACTTCATGATGGCTATCGCAACTGGCTTAAGAAGGCATATGATGTCCG TCCCGAAGAGCTCATGCTAGATCGCACTCAGCTCATGGGGCTGACAGCCCATGAGATGACAGTCCTTGTTGGAGGTCTGC GCGTGTTGGGTACTAATCACAACAATACCCAACATGGCGTATTCACTGATCGCGTTGGTGCCCTGACTAATGACTTTTTT GTCAACTTGACCGATATGGCCAATGTATGGATACCAAGCAAAGACAATTTGTACGAAATTCGAGACCGTAAAACGGGTAA CATCAAGTGGACAGCGACTCGTGTAGATCTGGTTTTTGGCTCTAATTCGATTCTGCGCTCCTATGCTGAAGTCTATGCTC AGGATGATAACAAGGAAAAATTTGTAAAGGACTTTGTTGCTGCATGGACAAAGATTATGAACGCCGATCGTTTTGACTTG GCATAA
Upstream 100 bases:
>100_bases ATCTCTCGCTTGACAGTATCTCTGCTTCGATTGCTTAGCTGCCCTCCCTTAAGCTATAGTTAGGTCTCTAGTGAATTATG ATCTGCGACCAGGAGTGTCT
Downstream 100 bases:
>100_bases TCTTTTGCAAGTTGACATGTCACAGATAATCATAGAAAAATAAGCCATCCTGCTTAGCCTTGAATAGGCTTCACTACATC AAGGCTAAAGATTCTATAAA
Product: catalase-peroxidase KatB
Products: NA
Alternate protein names: CP 1; Peroxidase/catalase 1 [H]
Number of amino acids: Translated: 721; Mature: 721
Protein sequence:
>721_residues MDGKVGNTATGCPVMHGGMTSAETSNTAWWPNALNLDILHQHDTKTNPMGKNFNYREEVKKLDFEALKKDLHALMTDSQP WWPADWGHYGGLMIRMSWHAAGSYRVADGRGGAGTGNQRFAPLNSWPDNVNLDKARRLLWPIKKKYGNKISWADLIALAG TIAYESMGLKTFGFGFGREDIWHPEKDVYWGSEQEWLGAKRYDGKSRESLENPLAAVQMGLIYVNPEGVNGQPDPLRTAQ DVRVTFGRMAMNDEETVALTAGGHTVGKCHGNGNAKFLGPDPEAADVEDQGLGWINKTTRGIGRNTVSSGIEGAWTTHPT QWDNGYFYLLLNYDWELKKSPAGAWQWEPIHIKEEDKPVDVEDPAIRRNPIMTDADMAIKMDPVYRKIAERFYKDPDYFA EVFARAWFKLTHRDMGPKTRYIGPDVPKEDLIWQDPVPAGNRAYDIAAAKAKIAASNLTIGEMVSTAWDSARTFRGSDKR GGANGARIRLKPQKDWEGNEPQRLTKVLRILESIAADTGASVADVIVLAGNVGIEKAAKAAGFDIIVPFAPGRGDATDDM TDAESFDVLEPLHDGYRNWLKKAYDVRPEELMLDRTQLMGLTAHEMTVLVGGLRVLGTNHNNTQHGVFTDRVGALTNDFF VNLTDMANVWIPSKDNLYEIRDRKTGNIKWTATRVDLVFGSNSILRSYAEVYAQDDNKEKFVKDFVAAWTKIMNADRFDL A
Sequences:
>Translated_721_residues MDGKVGNTATGCPVMHGGMTSAETSNTAWWPNALNLDILHQHDTKTNPMGKNFNYREEVKKLDFEALKKDLHALMTDSQP WWPADWGHYGGLMIRMSWHAAGSYRVADGRGGAGTGNQRFAPLNSWPDNVNLDKARRLLWPIKKKYGNKISWADLIALAG TIAYESMGLKTFGFGFGREDIWHPEKDVYWGSEQEWLGAKRYDGKSRESLENPLAAVQMGLIYVNPEGVNGQPDPLRTAQ DVRVTFGRMAMNDEETVALTAGGHTVGKCHGNGNAKFLGPDPEAADVEDQGLGWINKTTRGIGRNTVSSGIEGAWTTHPT QWDNGYFYLLLNYDWELKKSPAGAWQWEPIHIKEEDKPVDVEDPAIRRNPIMTDADMAIKMDPVYRKIAERFYKDPDYFA EVFARAWFKLTHRDMGPKTRYIGPDVPKEDLIWQDPVPAGNRAYDIAAAKAKIAASNLTIGEMVSTAWDSARTFRGSDKR GGANGARIRLKPQKDWEGNEPQRLTKVLRILESIAADTGASVADVIVLAGNVGIEKAAKAAGFDIIVPFAPGRGDATDDM TDAESFDVLEPLHDGYRNWLKKAYDVRPEELMLDRTQLMGLTAHEMTVLVGGLRVLGTNHNNTQHGVFTDRVGALTNDFF VNLTDMANVWIPSKDNLYEIRDRKTGNIKWTATRVDLVFGSNSILRSYAEVYAQDDNKEKFVKDFVAAWTKIMNADRFDL A >Mature_721_residues MDGKVGNTATGCPVMHGGMTSAETSNTAWWPNALNLDILHQHDTKTNPMGKNFNYREEVKKLDFEALKKDLHALMTDSQP WWPADWGHYGGLMIRMSWHAAGSYRVADGRGGAGTGNQRFAPLNSWPDNVNLDKARRLLWPIKKKYGNKISWADLIALAG TIAYESMGLKTFGFGFGREDIWHPEKDVYWGSEQEWLGAKRYDGKSRESLENPLAAVQMGLIYVNPEGVNGQPDPLRTAQ DVRVTFGRMAMNDEETVALTAGGHTVGKCHGNGNAKFLGPDPEAADVEDQGLGWINKTTRGIGRNTVSSGIEGAWTTHPT QWDNGYFYLLLNYDWELKKSPAGAWQWEPIHIKEEDKPVDVEDPAIRRNPIMTDADMAIKMDPVYRKIAERFYKDPDYFA EVFARAWFKLTHRDMGPKTRYIGPDVPKEDLIWQDPVPAGNRAYDIAAAKAKIAASNLTIGEMVSTAWDSARTFRGSDKR GGANGARIRLKPQKDWEGNEPQRLTKVLRILESIAADTGASVADVIVLAGNVGIEKAAKAAGFDIIVPFAPGRGDATDDM TDAESFDVLEPLHDGYRNWLKKAYDVRPEELMLDRTQLMGLTAHEMTVLVGGLRVLGTNHNNTQHGVFTDRVGALTNDFF VNLTDMANVWIPSKDNLYEIRDRKTGNIKWTATRVDLVFGSNSILRSYAEVYAQDDNKEKFVKDFVAAWTKIMNADRFDL A
Specific function: Bifunctional enzyme with both catalase and broad- spectrum peroxidase activity [H]
COG id: COG0376
COG function: function code P; Catalase (peroxidase I)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peroxidase family. Peroxidase/catalase subfamily [H]
Homologues:
Organism=Escherichia coli, GI1790378, Length=724, Percent_Identity=57.4585635359116, Blast_Score=813, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000763 - InterPro: IPR010255 - InterPro: IPR002016 - InterPro: IPR019794 [H]
Pfam domain/function: PF00141 peroxidase [H]
EC number: =1.11.1.6; =1.11.1.7 [H]
Molecular weight: Translated: 80521; Mature: 80521
Theoretical pI: Translated: 6.23; Mature: 6.23
Prosite motif: PS00436 PEROXIDASE_2 ; PS50873 PEROXIDASE_4
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDGKVGNTATGCPVMHGGMTSAETSNTAWWPNALNLDILHQHDTKTNPMGKNFNYREEVK CCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHH KLDFEALKKDLHALMTDSQPWWPADWGHYGGLMIRMSWHAAGSYRVADGRGGAGTGNQRF HCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEECCCCEEEECCCCCCCCCCCCC APLNSWPDNVNLDKARRLLWPIKKKYGNKISWADLIALAGTIAYESMGLKTFGFGFGRED CCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCEEECCCCCCCC IWHPEKDVYWGSEQEWLGAKRYDGKSRESLENPLAAVQMGLIYVNPEGVNGQPDPLRTAQ CCCCCCCCEECCCHHHCCCCCCCCCCHHHHHCHHHEEEEEEEEECCCCCCCCCCCCCCHH DVRVTFGRMAMNDEETVALTAGGHTVGKCHGNGNAKFLGPDPEAADVEDQGLGWINKTTR HHHEEHHHHCCCCCCEEEEEECCCEEEEEECCCCEEEECCCCCCCCCCCCCCCCHHHHHH GIGRNTVSSGIEGAWTTHPTQWDNGYFYLLLNYDWELKKSPAGAWQWEPIHIKEEDKPVD CCCCHHHHHCCCCCCCCCCCCCCCCEEEEEEECCCEECCCCCCCCCCCEEEECCCCCCCC VEDPAIRRNPIMTDADMAIKMDPVYRKIAERFYKDPDYFAEVFARAWFKLTHRDMGPKTR CCCCCCCCCCCCCCCCCEEEECHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCC YIGPDVPKEDLIWQDPVPAGNRAYDIAAAKAKIAASNLTIGEMVSTAWDSARTFRGSDKR CCCCCCCHHCCEECCCCCCCCCEEEEEHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCC GGANGARIRLKPQKDWEGNEPQRLTKVLRILESIAADTGASVADVIVLAGNVGIEKAAKA CCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCHHHHHHH AGFDIIVPFAPGRGDATDDMTDAESFDVLEPLHDGYRNWLKKAYDVRPEELMLDRTQLMG CCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHC LTAHEMTVLVGGLRVLGTNHNNTQHGVFTDRVGALTNDFFVNLTDMANVWIPSKDNLYEI CCHHHHHHHCCCEEEEECCCCCCCCCEEHHHHHHHCCCCEEEEEHHCEEEECCCCCEEEE RDRKTGNIKWTATRVDLVFGSNSILRSYAEVYAQDDNKEKFVKDFVAAWTKIMNADRFDL CCCCCCCEEEEEEEEEEEECCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCC A C >Mature Secondary Structure MDGKVGNTATGCPVMHGGMTSAETSNTAWWPNALNLDILHQHDTKTNPMGKNFNYREEVK CCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHH KLDFEALKKDLHALMTDSQPWWPADWGHYGGLMIRMSWHAAGSYRVADGRGGAGTGNQRF HCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEECCCCEEEECCCCCCCCCCCCC APLNSWPDNVNLDKARRLLWPIKKKYGNKISWADLIALAGTIAYESMGLKTFGFGFGRED CCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCEEECCCCCCCC IWHPEKDVYWGSEQEWLGAKRYDGKSRESLENPLAAVQMGLIYVNPEGVNGQPDPLRTAQ CCCCCCCCEECCCHHHCCCCCCCCCCHHHHHCHHHEEEEEEEEECCCCCCCCCCCCCCHH DVRVTFGRMAMNDEETVALTAGGHTVGKCHGNGNAKFLGPDPEAADVEDQGLGWINKTTR HHHEEHHHHCCCCCCEEEEEECCCEEEEEECCCCEEEECCCCCCCCCCCCCCCCHHHHHH GIGRNTVSSGIEGAWTTHPTQWDNGYFYLLLNYDWELKKSPAGAWQWEPIHIKEEDKPVD CCCCHHHHHCCCCCCCCCCCCCCCCEEEEEEECCCEECCCCCCCCCCCEEEECCCCCCCC VEDPAIRRNPIMTDADMAIKMDPVYRKIAERFYKDPDYFAEVFARAWFKLTHRDMGPKTR CCCCCCCCCCCCCCCCCEEEECHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCC YIGPDVPKEDLIWQDPVPAGNRAYDIAAAKAKIAASNLTIGEMVSTAWDSARTFRGSDKR CCCCCCCHHCCEECCCCCCCCCEEEEEHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCC GGANGARIRLKPQKDWEGNEPQRLTKVLRILESIAADTGASVADVIVLAGNVGIEKAAKA CCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCHHHHHHH AGFDIIVPFAPGRGDATDDMTDAESFDVLEPLHDGYRNWLKKAYDVRPEELMLDRTQLMG CCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHC LTAHEMTVLVGGLRVLGTNHNNTQHGVFTDRVGALTNDFFVNLTDMANVWIPSKDNLYEI CCHHHHHHHCCCEEEEECCCCCCCCCEEHHHHHHHCCCCEEEEEHHCEEEECCCCCEEEE RDRKTGNIKWTATRVDLVFGSNSILRSYAEVYAQDDNKEKFVKDFVAAWTKIMNADRFDL CCCCCCCEEEEEEEEEEEECCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCC A C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA