Click here to switch to the map view.

The map label for this gene is 54295207

Identifier: 54295207

GI number: 54295207

Start: 2607284

End: 2607952

Strand: Direct

Name: 54295207

Synonym: lpl2289

Alternate gene names: NA

Gene position: 2607284-2607952 (Clockwise)

Preceding gene: 54295206

Following gene: 54295208

Centisome position: 77.93

GC content: 29.75

Gene sequence:

>669_bases
ATGGAATTTGCGAAACCAGTTAAAGTAGCCTTTGGTCGGCTAGAGCATATTGCTTTTATAAAAAGGCACCTAGATGTTTA
CAAAAAACCAGATATTACCCAATATCCCATTGCAGCTTATGAATTTGATTTTCTCGATTTCATTTACAGCCTAGGCCTTA
TTAACATTTTAGCCTTTGTTTGCATAAGCCTATTCCCCTCATATTTTAAATATGATCCTTTTAAAATTTTTAATATTATT
CCCATCATGCTTTTATTAATAGTGAATACTGTTCTTGTAGCTGCAGTAATAGCATTTTTTCATTGGGGATTGTGTAAAGG
TCTTGGGTTCATTTATAAAATAAAAACTCATACTTTTTATGAGGCTGGAATATTTTGGCGAGTTTTTAGAGTTTTATCCC
TTTCTTATCTTCTTATAACAATTCCGCTTTTAATACAAATTAACAGTATATTCACTCACGAAGGCTTAGGAAGAACATTA
AATTTAATATCTCTATTAACAATAATTTTAATGCTAATGCTTCAAATAAAGTTATTTATTCTCCCTTTATATAAAATTGG
AAAACAATTCGGTAAAGCTCTAGGGTCAATTCAAAGTTTGCTTGTTATTGCTAGCGCATTATTAATCAATAATTTTTTTG
GAAACAGATACCACCTAGTATTTTTGTAA

Upstream 100 bases:

>100_bases
AACAGGCAAGTGTGCATCAGAATATCCTTCCCTTCACTAAATTTATTGCTAGTTGTATTTAGTACTTTGATTTTATATAA
AGGCTTTATGGAGAATTACA

Downstream 100 bases:

>100_bases
ATATACGAGAAGTCATAAAACTATTTTCAGCCCAATAAAGAATATGGACACATACACTCATTTATTAAGGAGCTTCGTTC
ATATGCTCAAGCAAAAAGTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 222; Mature: 222

Protein sequence:

>222_residues
MEFAKPVKVAFGRLEHIAFIKRHLDVYKKPDITQYPIAAYEFDFLDFIYSLGLINILAFVCISLFPSYFKYDPFKIFNII
PIMLLLIVNTVLVAAVIAFFHWGLCKGLGFIYKIKTHTFYEAGIFWRVFRVLSLSYLLITIPLLIQINSIFTHEGLGRTL
NLISLLTIILMLMLQIKLFILPLYKIGKQFGKALGSIQSLLVIASALLINNFFGNRYHLVFL

Sequences:

>Translated_222_residues
MEFAKPVKVAFGRLEHIAFIKRHLDVYKKPDITQYPIAAYEFDFLDFIYSLGLINILAFVCISLFPSYFKYDPFKIFNII
PIMLLLIVNTVLVAAVIAFFHWGLCKGLGFIYKIKTHTFYEAGIFWRVFRVLSLSYLLITIPLLIQINSIFTHEGLGRTL
NLISLLTIILMLMLQIKLFILPLYKIGKQFGKALGSIQSLLVIASALLINNFFGNRYHLVFL
>Mature_222_residues
MEFAKPVKVAFGRLEHIAFIKRHLDVYKKPDITQYPIAAYEFDFLDFIYSLGLINILAFVCISLFPSYFKYDPFKIFNII
PIMLLLIVNTVLVAAVIAFFHWGLCKGLGFIYKIKTHTFYEAGIFWRVFRVLSLSYLLITIPLLIQINSIFTHEGLGRTL
NLISLLTIILMLMLQIKLFILPLYKIGKQFGKALGSIQSLLVIASALLINNFFGNRYHLVFL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25580; Mature: 25580

Theoretical pI: Translated: 10.03; Mature: 10.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEFAKPVKVAFGRLEHIAFIKRHLDVYKKPDITQYPIAAYEFDFLDFIYSLGLINILAFV
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
CISLFPSYFKYDPFKIFNIIPIMLLLIVNTVLVAAVIAFFHWGLCKGLGFIYKIKTHTFY
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEEEHHHHH
EAGIFWRVFRVLSLSYLLITIPLLIQINSIFTHEGLGRTLNLISLLTIILMLMLQIKLFI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
LPLYKIGKQFGKALGSIQSLLVIASALLINNFFGNRYHLVFL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEC
>Mature Secondary Structure
MEFAKPVKVAFGRLEHIAFIKRHLDVYKKPDITQYPIAAYEFDFLDFIYSLGLINILAFV
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
CISLFPSYFKYDPFKIFNIIPIMLLLIVNTVLVAAVIAFFHWGLCKGLGFIYKIKTHTFY
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEEEHHHHH
EAGIFWRVFRVLSLSYLLITIPLLIQINSIFTHEGLGRTLNLISLLTIILMLMLQIKLFI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
LPLYKIGKQFGKALGSIQSLLVIASALLINNFFGNRYHLVFL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA