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The map label for this gene is ybcL [C]

Identifier: 54295054

GI number: 54295054

Start: 2437382

End: 2437909

Strand: Direct

Name: ybcL [C]

Synonym: lpl2134

Alternate gene names: 54295054

Gene position: 2437382-2437909 (Clockwise)

Preceding gene: 54295051

Following gene: 54295057

Centisome position: 72.85

GC content: 42.05

Gene sequence:

>528_bases
ATGGCCATATTTAAAAATATTGTCTTGACATTAGTCAGCTCTGCATTGCTTGTTACACCGTGTTTTTCTGCAGGATTAAC
ATTGGAAAGTCCGGCATTTGCATCGAATGCAGCAATTCCTCAAAAATTCACATGCAGCAATTTAAATTATTCTCCCCCAC
TAATATGGCATGATCCCAATCTGGGAACCCAATCTTATGTGTTAATAGTGCATGATCCTGATGCTCCTACAGGTAATTGG
ATACATTGGGTATTGTTTAATATCCCTGCTCAAGTGAAACAGCTCTCAGAAGGGACAACAACTCCTGCTGGCGCAACCAG
TGGGTTAAACAGCTGGAATACCACCGGTTACAGTGGTCCCTGCCCGCCTGCTGGTACACACCGTTACTATTTTACACTCT
ATGCTTTAGACACTTACCTTAATCTTGGCCCAGAAGCCACTGCTCAGGATGTGGTGAACGCTATGAAAGGAGATATTATA
GATACGGCTGAATTAGTAGGACATTATAGTAAGAATGCATCTCAATAA

Upstream 100 bases:

>100_bases
ATCACAAGTGTATCAATCGTAATCTATAATTTAAGGAAATCTATAAAAAACTAGGCTCTCAATAATTTCAGGTAAGTAAA
CAATAGAAACAGGGAAAGTG

Downstream 100 bases:

>100_bases
AATTGCAACAATGCTTTTCTCAAGCGATCCTGCAACAAACACAAGAATTGGCATAAAACAAAAATAGACCCGGGTAGTAA
AATAGTCGCCTGTCATAATC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 175; Mature: 174

Protein sequence:

>175_residues
MAIFKNIVLTLVSSALLVTPCFSAGLTLESPAFASNAAIPQKFTCSNLNYSPPLIWHDPNLGTQSYVLIVHDPDAPTGNW
IHWVLFNIPAQVKQLSEGTTTPAGATSGLNSWNTTGYSGPCPPAGTHRYYFTLYALDTYLNLGPEATAQDVVNAMKGDII
DTAELVGHYSKNASQ

Sequences:

>Translated_175_residues
MAIFKNIVLTLVSSALLVTPCFSAGLTLESPAFASNAAIPQKFTCSNLNYSPPLIWHDPNLGTQSYVLIVHDPDAPTGNW
IHWVLFNIPAQVKQLSEGTTTPAGATSGLNSWNTTGYSGPCPPAGTHRYYFTLYALDTYLNLGPEATAQDVVNAMKGDII
DTAELVGHYSKNASQ
>Mature_174_residues
AIFKNIVLTLVSSALLVTPCFSAGLTLESPAFASNAAIPQKFTCSNLNYSPPLIWHDPNLGTQSYVLIVHDPDAPTGNWI
HWVLFNIPAQVKQLSEGTTTPAGATSGLNSWNTTGYSGPCPPAGTHRYYFTLYALDTYLNLGPEATAQDVVNAMKGDIID
TAELVGHYSKNASQ

Specific function: Unknown

COG id: COG1881

COG function: function code R; Phospholipid-binding protein

Gene ontology:

Cell location: Periplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0098 family [H]

Homologues:

Organism=Escherichia coli, GI1786757, Length=105, Percent_Identity=43.8095238095238, Blast_Score=86, Evalue=1e-18,
Organism=Escherichia coli, GI1786990, Length=124, Percent_Identity=37.9032258064516, Blast_Score=83, Evalue=9e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008914
- InterPro:   IPR005247 [H]

Pfam domain/function: PF01161 PBP [H]

EC number: NA

Molecular weight: Translated: 18774; Mature: 18643

Theoretical pI: Translated: 5.43; Mature: 5.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAIFKNIVLTLVSSALLVTPCFSAGLTLESPAFASNAAIPQKFTCSNLNYSPPLIWHDPN
CHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCCEEECCCCCCCCEEEECCC
LGTQSYVLIVHDPDAPTGNWIHWVLFNIPAQVKQLSEGTTTPAGATSGLNSWNTTGYSGP
CCCCEEEEEEECCCCCCCCEEEEEEECCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
CPPAGTHRYYFTLYALDTYLNLGPEATAQDVVNAMKGDIIDTAELVGHYSKNASQ
CCCCCCCEEEEEEEEEEHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHCCCCCC
>Mature Secondary Structure 
AIFKNIVLTLVSSALLVTPCFSAGLTLESPAFASNAAIPQKFTCSNLNYSPPLIWHDPN
HHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCCEEECCCCCCCCEEEECCC
LGTQSYVLIVHDPDAPTGNWIHWVLFNIPAQVKQLSEGTTTPAGATSGLNSWNTTGYSGP
CCCCEEEEEEECCCCCCCCEEEEEEECCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
CPPAGTHRYYFTLYALDTYLNLGPEATAQDVVNAMKGDIIDTAELVGHYSKNASQ
CCCCCCCEEEEEEEEEEHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9371463 [H]