Click here to switch to the map view.

The map label for this gene is 54295034

Identifier: 54295034

GI number: 54295034

Start: 2414580

End: 2416295

Strand: Direct

Name: 54295034

Synonym: lpl2114

Alternate gene names: NA

Gene position: 2414580-2416295 (Clockwise)

Preceding gene: 54295031

Following gene: 54295036

Centisome position: 72.17

GC content: 32.17

Gene sequence:

>1716_bases
ATGAGTGATGTAAAACCTTATCTTTCTTCAGATACTCAAGTAAAACTGCATTTTCAACGCATGGGACAATTAAACAATAC
TCCTCCATTAGTTATTCAACCACAAAGCGTACGATTAGATTTTATTCAATATTGCCTAAGTCAGGACAGAAATTTGCAAT
CCCCTCAAACAACATTGGATAATTATCTTAAACAAGATAAAAACTCGATGCCTGAAACAGAAAGCTCCAGAGAACCATTA
TCACAAGGTGATATAAATCGTAAGAAATTATCTCTGCTTTTTTCCCATTTATCTGCATTTAATTACAACATGGAAGGATT
AACTATAGAACCGGTTGCTGTTGCGGATATGATCAAGAAAATGCAAGATATTAACCAAATGAATGATCAGGAAGTAGCTG
AGTATTTAGATAAATTAATTGGAGAAAAAATTCCTGGACATGAGTCCATGTCAATTGAGAGTTTTTTAGATAACATTCAT
GATCTATATAAAAATGATGGTGTAAGTTTTCATTGTTATCTACGCGAAAATTTTTTTAATCCACTTAAGGCGGATGCCAT
TAAAAAAGCGGAGCCTGCTCTTAATTATTTTATGCCTGATTTATTTTGTCAGAAACATATTAATACCTGTGAACTGGTTA
CAACAATGACTATTTTAAAAAAGGTTGTAACTAATTTTAATCAAATGCAAAACATTTGTTTGGATAGCAATAATCTTCCT
ATAGCGGTTATTGAAGCACAAAAGAGAATTAAAGAATTAGAGCAAAAATTCGAAAACTACCTTAAAAACCCTTCAACTCA
TAAAGAGAACGACATAAAAAAATTAGTGCATGACTATCAAAAGGAAGTTGAAAAAATTCAAATTGAAATGGAAAAATCAT
TTGGGAAAAAATTTAATCCCGAAATAACACCTTACCTGAAAAAATATGATAACCATACTCTTTCGACAATCCATCATTTG
GTAACGACAAGAATTGTACCTGAGGGTTTTGATGTTGATGAATGGGAGCTTAAAAATACACTTCATGACAAATGCACATC
CTTTCAAAATAAATTACTCAGTGATCATCTACCTATGATTATTGAAAAAGACATAGTAAAAAATTTACATAAAGACACTG
CTAATCCAGAAGAAAAAAAGTCATTCCTCGACAACTTGAAGCAAATGTTTTTATATGGTAAGTCAAGGGCATTTACAGAT
TTTATTGTTTGCGGGCATGCCTTGGTTATGGACATTTGTAATAACGGTCTCTTAAAAGTGCTTGAGCATCGAAATGCCAG
GAAAGAAACAACCGTATTATCTCATCAGGGCTTGAAAGATCTGGGAATACAAAGTGTACATGACAAACATTCTAATCCTG
CAAAGGAAGCGTTGAATAGCATCGAACAAAAATTAAAAATTTTATATATGGAGAGAGAGAATCTTGTTAAAATTAAAGTA
GGAACACAAGACGATCCATTAGTACATTCCGAAATTAGCTCTATGTTAGTCAAAAAAGACAATGAAATAAGAGACTTGTT
GGAAGTTGAAAAAAATTTAAAAATAAAGTACAGCCCTGAAAAACCTAAAGTGACTCATGGAGCCTTTCATCGAATTAAAG
AAGAGTTTCAAAAAATTAAAACAGAGATCATTGGTGAAAATAAAGTTCGAGATAAACAAGAAGCTCTCGAGAATGATCGT
AATGAACTAAATTTAGCGGACAGGCGCCTGACATAA

Upstream 100 bases:

>100_bases
TTTTGTGTTTATTTTGTGCATTTTTTAATATACTTTAAAGTATATGGTCTTTGGTAAATTACCTGTATATGAGGAAAGCT
TTCCTCAAGGATGTGTGCAT

Downstream 100 bases:

>100_bases
CATTATTATTGGTGTTCATGTGACTACAGTTCATGTTGATCACAACTCTTCATTAAAATAGCACAATATGAGTTATTCTT
CACTTCAGTACAGCAATCAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 571; Mature: 570

Protein sequence:

>571_residues
MSDVKPYLSSDTQVKLHFQRMGQLNNTPPLVIQPQSVRLDFIQYCLSQDRNLQSPQTTLDNYLKQDKNSMPETESSREPL
SQGDINRKKLSLLFSHLSAFNYNMEGLTIEPVAVADMIKKMQDINQMNDQEVAEYLDKLIGEKIPGHESMSIESFLDNIH
DLYKNDGVSFHCYLRENFFNPLKADAIKKAEPALNYFMPDLFCQKHINTCELVTTMTILKKVVTNFNQMQNICLDSNNLP
IAVIEAQKRIKELEQKFENYLKNPSTHKENDIKKLVHDYQKEVEKIQIEMEKSFGKKFNPEITPYLKKYDNHTLSTIHHL
VTTRIVPEGFDVDEWELKNTLHDKCTSFQNKLLSDHLPMIIEKDIVKNLHKDTANPEEKKSFLDNLKQMFLYGKSRAFTD
FIVCGHALVMDICNNGLLKVLEHRNARKETTVLSHQGLKDLGIQSVHDKHSNPAKEALNSIEQKLKILYMERENLVKIKV
GTQDDPLVHSEISSMLVKKDNEIRDLLEVEKNLKIKYSPEKPKVTHGAFHRIKEEFQKIKTEIIGENKVRDKQEALENDR
NELNLADRRLT

Sequences:

>Translated_571_residues
MSDVKPYLSSDTQVKLHFQRMGQLNNTPPLVIQPQSVRLDFIQYCLSQDRNLQSPQTTLDNYLKQDKNSMPETESSREPL
SQGDINRKKLSLLFSHLSAFNYNMEGLTIEPVAVADMIKKMQDINQMNDQEVAEYLDKLIGEKIPGHESMSIESFLDNIH
DLYKNDGVSFHCYLRENFFNPLKADAIKKAEPALNYFMPDLFCQKHINTCELVTTMTILKKVVTNFNQMQNICLDSNNLP
IAVIEAQKRIKELEQKFENYLKNPSTHKENDIKKLVHDYQKEVEKIQIEMEKSFGKKFNPEITPYLKKYDNHTLSTIHHL
VTTRIVPEGFDVDEWELKNTLHDKCTSFQNKLLSDHLPMIIEKDIVKNLHKDTANPEEKKSFLDNLKQMFLYGKSRAFTD
FIVCGHALVMDICNNGLLKVLEHRNARKETTVLSHQGLKDLGIQSVHDKHSNPAKEALNSIEQKLKILYMERENLVKIKV
GTQDDPLVHSEISSMLVKKDNEIRDLLEVEKNLKIKYSPEKPKVTHGAFHRIKEEFQKIKTEIIGENKVRDKQEALENDR
NELNLADRRLT
>Mature_570_residues
SDVKPYLSSDTQVKLHFQRMGQLNNTPPLVIQPQSVRLDFIQYCLSQDRNLQSPQTTLDNYLKQDKNSMPETESSREPLS
QGDINRKKLSLLFSHLSAFNYNMEGLTIEPVAVADMIKKMQDINQMNDQEVAEYLDKLIGEKIPGHESMSIESFLDNIHD
LYKNDGVSFHCYLRENFFNPLKADAIKKAEPALNYFMPDLFCQKHINTCELVTTMTILKKVVTNFNQMQNICLDSNNLPI
AVIEAQKRIKELEQKFENYLKNPSTHKENDIKKLVHDYQKEVEKIQIEMEKSFGKKFNPEITPYLKKYDNHTLSTIHHLV
TTRIVPEGFDVDEWELKNTLHDKCTSFQNKLLSDHLPMIIEKDIVKNLHKDTANPEEKKSFLDNLKQMFLYGKSRAFTDF
IVCGHALVMDICNNGLLKVLEHRNARKETTVLSHQGLKDLGIQSVHDKHSNPAKEALNSIEQKLKILYMERENLVKIKVG
TQDDPLVHSEISSMLVKKDNEIRDLLEVEKNLKIKYSPEKPKVTHGAFHRIKEEFQKIKTEIIGENKVRDKQEALENDRN
ELNLADRRLT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 66289; Mature: 66158

Theoretical pI: Translated: 7.01; Mature: 7.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDVKPYLSSDTQVKLHFQRMGQLNNTPPLVIQPQSVRLDFIQYCLSQDRNLQSPQTTLD
CCCCCCCCCCCCEEEEHHHHHCCCCCCCCEEECCCHHHHHHHHHHHCCCCCCCCHHHHHH
NYLKQDKNSMPETESSREPLSQGDINRKKLSLLFSHLSAFNYNMEGLTIEPVAVADMIKK
HHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEECHHHHHHHHHH
MQDINQMNDQEVAEYLDKLIGEKIPGHESMSIESFLDNIHDLYKNDGVSFHCYLRENFFN
HHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCC
PLKADAIKKAEPALNYFMPDLFCQKHINTCELVTTMTILKKVVTNFNQMQNICLDSNNLP
HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
IAVIEAQKRIKELEQKFENYLKNPSTHKENDIKKLVHDYQKEVEKIQIEMEKSFGKKFNP
EEEHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
EITPYLKKYDNHTLSTIHHLVTTRIVPEGFDVDEWELKNTLHDKCTSFQNKLLSDHLPMI
CCCHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHH
IEKDIVKNLHKDTANPEEKKSFLDNLKQMFLYGKSRAFTDFIVCGHALVMDICNNGLLKV
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHH
LEHRNARKETTVLSHQGLKDLGIQSVHDKHSNPAKEALNSIEQKLKILYMERENLVKIKV
HHHCCCHHHHHHHHHCCHHHHCCHHHHHCCCCHHHHHHHHHHHHHHHHEEECCCEEEEEE
GTQDDPLVHSEISSMLVKKDNEIRDLLEVEKNLKIKYSPEKPKVTHGAFHRIKEEFQKIK
CCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHCCEEEECCCCCCCHHHHHHHHHHHHHHHH
TEIIGENKVRDKQEALENDRNELNLADRRLT
HHHHCCCCCCHHHHHHHCCCHHCCCHHHCCC
>Mature Secondary Structure 
SDVKPYLSSDTQVKLHFQRMGQLNNTPPLVIQPQSVRLDFIQYCLSQDRNLQSPQTTLD
CCCCCCCCCCCEEEEHHHHHCCCCCCCCEEECCCHHHHHHHHHHHCCCCCCCCHHHHHH
NYLKQDKNSMPETESSREPLSQGDINRKKLSLLFSHLSAFNYNMEGLTIEPVAVADMIKK
HHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEECHHHHHHHHHH
MQDINQMNDQEVAEYLDKLIGEKIPGHESMSIESFLDNIHDLYKNDGVSFHCYLRENFFN
HHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCC
PLKADAIKKAEPALNYFMPDLFCQKHINTCELVTTMTILKKVVTNFNQMQNICLDSNNLP
HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
IAVIEAQKRIKELEQKFENYLKNPSTHKENDIKKLVHDYQKEVEKIQIEMEKSFGKKFNP
EEEHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
EITPYLKKYDNHTLSTIHHLVTTRIVPEGFDVDEWELKNTLHDKCTSFQNKLLSDHLPMI
CCCHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHH
IEKDIVKNLHKDTANPEEKKSFLDNLKQMFLYGKSRAFTDFIVCGHALVMDICNNGLLKV
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHH
LEHRNARKETTVLSHQGLKDLGIQSVHDKHSNPAKEALNSIEQKLKILYMERENLVKIKV
HHHCCCHHHHHHHHHCCHHHHCCHHHHHCCCCHHHHHHHHHHHHHHHHEEECCCEEEEEE
GTQDDPLVHSEISSMLVKKDNEIRDLLEVEKNLKIKYSPEKPKVTHGAFHRIKEEFQKIK
CCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHCCEEEECCCCCCCHHHHHHHHHHHHHHHH
TEIIGENKVRDKQEALENDRNELNLADRRLT
HHHHCCCCCCHHHHHHHCCCHHCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA