BacMap

Definition	Legionella pneumophila str. Lens, complete genome.
Accession	NC_006369
Length	3,345,687

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The map label for this gene is dbpA [H]

Identifier: 54294961

GI number: 54294961

Start: 2284179

End: 2285585

Strand: Direct

Name: dbpA [H]

Synonym: lpl2040

Alternate gene names: 54294961

Gene position: 2284179-2285585 (Clockwise)

Preceding gene: 54294960

Following gene: 54294962

Centisome position: 68.27

GC content: 38.81

Gene sequence:

>1407_bases
ATGATTCAATCAGAACACAACGACCAACACCTATCATTCTCTCAATTCCCCCTTCGTCAAGAATTAATAAAAAGTCTTGC
TTCTTCAAATTATGAAAATATGACCCCTATCCAAATGCAAAGCCTGCCCATAATTCTTAGAAATGAAGATCTGATAGCAC
AAGCAAAAACAGGGAGTGGAAAGACCGCTGCTTTTGCTTTGTCTTTATTAAATAATTTAAAAATTTCTTTTTTTGCAGTA
CAAGCCTTGGTTCTTTGCCCTACCCGTGAACTCGCGGAACAAGTAAGCCAGGCTATCCGTCGATTAGCCTGTTTTATGCC
TAATGTCAAAATTATTAATTTATCTGGTGGTATACCAATGCAGCCTCAGCTTGATTCATTACGGCATGGAGCTCATATTA
TTGTAGGAACACCGGGGAGAATACTTAAGCATTTAAAAAACACCTCTTTAGACTTATCTCAGGTAAAAGCTTTAATTTTA
GATGAGGCAGACAGAATGCTGGATATGGGTTTTTTTGATGACATTAAAAACATTATTTCGGTTTGTCCCAAACAACGACA
AACCCTGCTTTTTTCTGCGACCTATCCTGAAGAAATCAAACGGCTTTCAAAACAATTTATGAAGGACCCTAAAGAAGTTC
ATGTGGTAACTCCTCCTGAAGAAATTGATATTGAACAACATTTTTATGAAGTCTCGAGACATGCTCAGAAATTTCCCTTA
TTAAAATCATTACTGTTGCACTATCAACCCGTTTCAGTGTTAATCTTCTGTAATACCAAGCAACAAACAATAGAAGTCAC
AGACCAGCTCATCAATGAAGGCTTCAGTGCCATCGCTTTAAATGGTGATATGGAACAAATCGAGCGTGATCTTGCTGTCT
TGCGTTTTGCCAACAAAAGTTGTTCTATTCTTGTCGCCACTGATGTTGCAGCTCGAGGACTTGATATAAAAGAACTTTCC
GCAGTGATTAATTTTGATCTCGCTTTTGATCACGACGTCCATATTCATCGTATTGGTCGAACAGGACGAGCTGGGAGTAA
AGGCATTGCCTTAAGCATTGTAACGCCTGCAGATGCACAACGAATTTGCGCCATTGAAGATAACTACCCGCACCCCATTC
ATTGGGGAAACATTAATGAATTAGAAAATCACAACACTGCTCGCTTAGTGCCAGAAATGGTTACACTCTGTATTGCTTCC
GGTAAAAAAGATAAAATTCGCCCTGGTGACATCCTTGGGGCATTAACCAAAGATGCAGGATTAGCAGGCAACACAATTGG
CAAAATTAACATCACCGCTATGTACTCCTATGTTGCAATTCACCGCAGCCAAGCAGATAAAGCCTACCAATATTTACAAA
GTGGAAAATTAAAAGGACGTAAAGTTAATGTACGTAAAATAAATTGA

Upstream 100 bases:

>100_bases
CAATTGCAAGCATCAGATTAAGCTTGCCCAAAATAAATTGATTTAAAATTGCACTAAGAAGTGCTAAGCTATTCACTTAT
CATAACAATAAGCACTTTCC

Downstream 100 bases:

>100_bases
TTTTTCTAAACCATGCGAAAAACTTACTGCAACAATTGAAAAATGAAGCAGTTATTATGTAAAAGGCCTAATAATACAAG
CCTAAGGATTTATTAGTGGC

Product: ATP-dependent RNA helicase DbpA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 468; Mature: 468

Protein sequence:

>468_residues
MIQSEHNDQHLSFSQFPLRQELIKSLASSNYENMTPIQMQSLPIILRNEDLIAQAKTGSGKTAAFALSLLNNLKISFFAV
QALVLCPTRELAEQVSQAIRRLACFMPNVKIINLSGGIPMQPQLDSLRHGAHIIVGTPGRILKHLKNTSLDLSQVKALIL
DEADRMLDMGFFDDIKNIISVCPKQRQTLLFSATYPEEIKRLSKQFMKDPKEVHVVTPPEEIDIEQHFYEVSRHAQKFPL
LKSLLLHYQPVSVLIFCNTKQQTIEVTDQLINEGFSAIALNGDMEQIERDLAVLRFANKSCSILVATDVAARGLDIKELS
AVINFDLAFDHDVHIHRIGRTGRAGSKGIALSIVTPADAQRICAIEDNYPHPIHWGNINELENHNTARLVPEMVTLCIAS
GKKDKIRPGDILGALTKDAGLAGNTIGKINITAMYSYVAIHRSQADKAYQYLQSGKLKGRKVNVRKIN

Sequences:

>Translated_468_residues
MIQSEHNDQHLSFSQFPLRQELIKSLASSNYENMTPIQMQSLPIILRNEDLIAQAKTGSGKTAAFALSLLNNLKISFFAV
QALVLCPTRELAEQVSQAIRRLACFMPNVKIINLSGGIPMQPQLDSLRHGAHIIVGTPGRILKHLKNTSLDLSQVKALIL
DEADRMLDMGFFDDIKNIISVCPKQRQTLLFSATYPEEIKRLSKQFMKDPKEVHVVTPPEEIDIEQHFYEVSRHAQKFPL
LKSLLLHYQPVSVLIFCNTKQQTIEVTDQLINEGFSAIALNGDMEQIERDLAVLRFANKSCSILVATDVAARGLDIKELS
AVINFDLAFDHDVHIHRIGRTGRAGSKGIALSIVTPADAQRICAIEDNYPHPIHWGNINELENHNTARLVPEMVTLCIAS
GKKDKIRPGDILGALTKDAGLAGNTIGKINITAMYSYVAIHRSQADKAYQYLQSGKLKGRKVNVRKIN
>Mature_468_residues
MIQSEHNDQHLSFSQFPLRQELIKSLASSNYENMTPIQMQSLPIILRNEDLIAQAKTGSGKTAAFALSLLNNLKISFFAV
QALVLCPTRELAEQVSQAIRRLACFMPNVKIINLSGGIPMQPQLDSLRHGAHIIVGTPGRILKHLKNTSLDLSQVKALIL
DEADRMLDMGFFDDIKNIISVCPKQRQTLLFSATYPEEIKRLSKQFMKDPKEVHVVTPPEEIDIEQHFYEVSRHAQKFPL
LKSLLLHYQPVSVLIFCNTKQQTIEVTDQLINEGFSAIALNGDMEQIERDLAVLRFANKSCSILVATDVAARGLDIKELS
AVINFDLAFDHDVHIHRIGRTGRAGSKGIALSIVTPADAQRICAIEDNYPHPIHWGNINELENHNTARLVPEMVTLCIAS
GKKDKIRPGDILGALTKDAGLAGNTIGKINITAMYSYVAIHRSQADKAYQYLQSGKLKGRKVNVRKIN

Specific function: Has a helix-destabilizing activity, which is not coupled to the ATPase activity. Can unwind the 23S rRNA as well as 16S rRNA. Exhibits an RNA-dependent ATPase activity, specifically stimulated by bacterial 23S rRNA. Could play a major role in ribosome ass

COG id: COG0513

COG function: function code LKJ; Superfamily II DNA and RNA helicases

Gene ontology:

Cell location: Cytoplasm (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 helicase C-terminal domain [H]

Homologues:

Organism=Homo sapiens, GI7661920, Length=373, Percent_Identity=35.9249329758713, Blast_Score=252, Evalue=5e-67,
Organism=Homo sapiens, GI45446747, Length=362, Percent_Identity=40.0552486187845, Blast_Score=251, Evalue=8e-67,
Organism=Homo sapiens, GI45446743, Length=362, Percent_Identity=40.0552486187845, Blast_Score=251, Evalue=8e-67,
Organism=Homo sapiens, GI262118318, Length=359, Percent_Identity=38.7186629526462, Blast_Score=232, Evalue=7e-61,
Organism=Homo sapiens, GI216548263, Length=359, Percent_Identity=38.7186629526462, Blast_Score=231, Evalue=8e-61,
Organism=Homo sapiens, GI262231852, Length=359, Percent_Identity=38.7186629526462, Blast_Score=231, Evalue=8e-61,
Organism=Homo sapiens, GI13518015, Length=359, Percent_Identity=38.7186629526462, Blast_Score=231, Evalue=1e-60,
Organism=Homo sapiens, GI20149629, Length=356, Percent_Identity=37.9213483146067, Blast_Score=225, Evalue=6e-59,
Organism=Homo sapiens, GI4758112, Length=377, Percent_Identity=34.7480106100796, Blast_Score=223, Evalue=2e-58,
Organism=Homo sapiens, GI18375623, Length=377, Percent_Identity=34.7480106100796, Blast_Score=223, Evalue=2e-58,
Organism=Homo sapiens, GI164664518, Length=357, Percent_Identity=33.3333333333333, Blast_Score=223, Evalue=4e-58,
Organism=Homo sapiens, GI50659095, Length=379, Percent_Identity=37.2031662269129, Blast_Score=220, Evalue=2e-57,
Organism=Homo sapiens, GI224593278, Length=358, Percent_Identity=38.8268156424581, Blast_Score=218, Evalue=7e-57,
Organism=Homo sapiens, GI83700235, Length=373, Percent_Identity=36.4611260053619, Blast_Score=218, Evalue=7e-57,
Organism=Homo sapiens, GI21040371, Length=364, Percent_Identity=33.7912087912088, Blast_Score=218, Evalue=7e-57,
Organism=Homo sapiens, GI4503529, Length=378, Percent_Identity=35.7142857142857, Blast_Score=218, Evalue=8e-57,
Organism=Homo sapiens, GI41327771, Length=385, Percent_Identity=34.2857142857143, Blast_Score=218, Evalue=9e-57,
Organism=Homo sapiens, GI21071032, Length=361, Percent_Identity=35.7340720221607, Blast_Score=217, Evalue=2e-56,
Organism=Homo sapiens, GI148613856, Length=361, Percent_Identity=33.7950138504155, Blast_Score=216, Evalue=3e-56,
Organism=Homo sapiens, GI38201710, Length=361, Percent_Identity=33.7950138504155, Blast_Score=216, Evalue=3e-56,
Organism=Homo sapiens, GI4758138, Length=363, Percent_Identity=33.3333333333333, Blast_Score=216, Evalue=3e-56,
Organism=Homo sapiens, GI13129006, Length=385, Percent_Identity=36.3636363636364, Blast_Score=213, Evalue=2e-55,
Organism=Homo sapiens, GI41327773, Length=359, Percent_Identity=36.7688022284123, Blast_Score=213, Evalue=3e-55,
Organism=Homo sapiens, GI87196351, Length=366, Percent_Identity=36.6120218579235, Blast_Score=209, Evalue=5e-54,
Organism=Homo sapiens, GI301171467, Length=366, Percent_Identity=36.6120218579235, Blast_Score=209, Evalue=6e-54,
Organism=Homo sapiens, GI301171475, Length=366, Percent_Identity=36.6120218579235, Blast_Score=209, Evalue=6e-54,
Organism=Homo sapiens, GI169881239, Length=366, Percent_Identity=36.6120218579235, Blast_Score=207, Evalue=2e-53,
Organism=Homo sapiens, GI13514809, Length=366, Percent_Identity=36.6120218579235, Blast_Score=207, Evalue=2e-53,
Organism=Homo sapiens, GI188035877, Length=350, Percent_Identity=35.4285714285714, Blast_Score=206, Evalue=3e-53,
Organism=Homo sapiens, GI31542656, Length=379, Percent_Identity=33.245382585752, Blast_Score=202, Evalue=6e-52,
Organism=Homo sapiens, GI13514831, Length=365, Percent_Identity=36.7123287671233, Blast_Score=197, Evalue=1e-50,
Organism=Homo sapiens, GI222352149, Length=360, Percent_Identity=33.6111111111111, Blast_Score=192, Evalue=7e-49,
Organism=Homo sapiens, GI256223453, Length=349, Percent_Identity=30.945558739255, Blast_Score=191, Evalue=2e-48,
Organism=Homo sapiens, GI8922886, Length=354, Percent_Identity=32.7683615819209, Blast_Score=190, Evalue=2e-48,
Organism=Homo sapiens, GI6005743, Length=354, Percent_Identity=32.4858757062147, Blast_Score=189, Evalue=5e-48,
Organism=Homo sapiens, GI51094101, Length=360, Percent_Identity=33.0555555555556, Blast_Score=186, Evalue=5e-47,
Organism=Homo sapiens, GI164419743, Length=360, Percent_Identity=33.0555555555556, Blast_Score=186, Evalue=6e-47,
Organism=Homo sapiens, GI41327776, Length=338, Percent_Identity=34.9112426035503, Blast_Score=185, Evalue=7e-47,
Organism=Homo sapiens, GI55749865, Length=357, Percent_Identity=31.9327731092437, Blast_Score=184, Evalue=1e-46,
Organism=Homo sapiens, GI41327779, Length=411, Percent_Identity=32.1167883211679, Blast_Score=184, Evalue=2e-46,
Organism=Homo sapiens, GI62241022, Length=331, Percent_Identity=33.5347432024169, Blast_Score=180, Evalue=2e-45,
Organism=Homo sapiens, GI38327634, Length=353, Percent_Identity=33.7110481586402, Blast_Score=177, Evalue=2e-44,
Organism=Homo sapiens, GI164419732, Length=361, Percent_Identity=30.4709141274238, Blast_Score=177, Evalue=2e-44,
Organism=Homo sapiens, GI62241024, Length=315, Percent_Identity=33.6507936507937, Blast_Score=176, Evalue=4e-44,
Organism=Homo sapiens, GI17505907, Length=420, Percent_Identity=29.0476190476191, Blast_Score=160, Evalue=3e-39,
Organism=Homo sapiens, GI9506931, Length=461, Percent_Identity=30.1518438177874, Blast_Score=156, Evalue=3e-38,
Organism=Homo sapiens, GI38569503, Length=359, Percent_Identity=28.9693593314763, Blast_Score=156, Evalue=5e-38,
Organism=Homo sapiens, GI38569505, Length=359, Percent_Identity=28.9693593314763, Blast_Score=156, Evalue=5e-38,
Organism=Homo sapiens, GI4826686, Length=334, Percent_Identity=30.8383233532934, Blast_Score=130, Evalue=4e-30,
Organism=Homo sapiens, GI256773275, Length=400, Percent_Identity=30.25, Blast_Score=127, Evalue=2e-29,
Organism=Homo sapiens, GI9966805, Length=313, Percent_Identity=32.9073482428115, Blast_Score=125, Evalue=6e-29,
Organism=Homo sapiens, GI20336298, Length=221, Percent_Identity=34.3891402714932, Blast_Score=117, Evalue=3e-26,
Organism=Homo sapiens, GI154759257, Length=408, Percent_Identity=25.2450980392157, Blast_Score=111, Evalue=1e-24,
Organism=Escherichia coli, GI1787605, Length=436, Percent_Identity=52.0642201834862, Blast_Score=446, Evalue=1e-126,
Organism=Escherichia coli, GI87082221, Length=347, Percent_Identity=44.3804034582133, Blast_Score=291, Evalue=4e-80,
Organism=Escherichia coli, GI1787016, Length=353, Percent_Identity=39.0934844192635, Blast_Score=255, Evalue=4e-69,
Organism=Escherichia coli, GI1790214, Length=375, Percent_Identity=36, Blast_Score=207, Evalue=1e-54,
Organism=Escherichia coli, GI1788930, Length=343, Percent_Identity=37.3177842565598, Blast_Score=204, Evalue=1e-53,
Organism=Caenorhabditis elegans, GI71995724, Length=365, Percent_Identity=36.4383561643836, Blast_Score=257, Evalue=1e-68,
Organism=Caenorhabditis elegans, GI17507121, Length=365, Percent_Identity=36.4383561643836, Blast_Score=256, Evalue=1e-68,
Organism=Caenorhabditis elegans, GI71987143, Length=377, Percent_Identity=35.2785145888594, Blast_Score=255, Evalue=3e-68,
Organism=Caenorhabditis elegans, GI17552642, Length=360, Percent_Identity=40, Blast_Score=230, Evalue=1e-60,
Organism=Caenorhabditis elegans, GI17555296, Length=359, Percent_Identity=38.1615598885794, Blast_Score=229, Evalue=2e-60,
Organism=Caenorhabditis elegans, GI32565321, Length=378, Percent_Identity=35.4497354497354, Blast_Score=227, Evalue=1e-59,
Organism=Caenorhabditis elegans, GI17510307, Length=364, Percent_Identity=37.9120879120879, Blast_Score=223, Evalue=2e-58,
Organism=Caenorhabditis elegans, GI17510309, Length=364, Percent_Identity=37.9120879120879, Blast_Score=223, Evalue=2e-58,
Organism=Caenorhabditis elegans, GI115533224, Length=360, Percent_Identity=37.5, Blast_Score=222, Evalue=3e-58,
Organism=Caenorhabditis elegans, GI71995514, Length=364, Percent_Identity=37.9120879120879, Blast_Score=221, Evalue=5e-58,
Organism=Caenorhabditis elegans, GI71982858, Length=363, Percent_Identity=33.0578512396694, Blast_Score=218, Evalue=6e-57,
Organism=Caenorhabditis elegans, GI17552114, Length=356, Percent_Identity=31.1797752808989, Blast_Score=213, Evalue=2e-55,
Organism=Caenorhabditis elegans, GI86570094, Length=365, Percent_Identity=33.6986301369863, Blast_Score=211, Evalue=5e-55,
Organism=Caenorhabditis elegans, GI17510559, Length=378, Percent_Identity=32.2751322751323, Blast_Score=201, Evalue=8e-52,
Organism=Caenorhabditis elegans, GI71995718, Length=377, Percent_Identity=35.0132625994695, Blast_Score=200, Evalue=1e-51,
Organism=Caenorhabditis elegans, GI17507945, Length=334, Percent_Identity=36.5269461077844, Blast_Score=199, Evalue=2e-51,
Organism=Caenorhabditis elegans, GI17507877, Length=374, Percent_Identity=34.2245989304813, Blast_Score=196, Evalue=3e-50,
Organism=Caenorhabditis elegans, GI17507879, Length=374, Percent_Identity=34.2245989304813, Blast_Score=191, Evalue=6e-49,
Organism=Caenorhabditis elegans, GI17536101, Length=409, Percent_Identity=30.5623471882641, Blast_Score=189, Evalue=3e-48,
Organism=Caenorhabditis elegans, GI17536099, Length=409, Percent_Identity=30.5623471882641, Blast_Score=189, Evalue=3e-48,
Organism=Caenorhabditis elegans, GI71999646, Length=359, Percent_Identity=32.033426183844, Blast_Score=187, Evalue=1e-47,
Organism=Caenorhabditis elegans, GI71999644, Length=346, Percent_Identity=32.3699421965318, Blast_Score=186, Evalue=2e-47,
Organism=Caenorhabditis elegans, GI17537549, Length=369, Percent_Identity=30.8943089430894, Blast_Score=185, Evalue=4e-47,
Organism=Caenorhabditis elegans, GI17536103, Length=414, Percent_Identity=30.9178743961353, Blast_Score=185, Evalue=4e-47,
Organism=Caenorhabditis elegans, GI193206561, Length=350, Percent_Identity=30.5714285714286, Blast_Score=181, Evalue=5e-46,
Organism=Caenorhabditis elegans, GI17507881, Length=381, Percent_Identity=32.2834645669291, Blast_Score=180, Evalue=2e-45,
Organism=Caenorhabditis elegans, GI17509811, Length=376, Percent_Identity=32.7127659574468, Blast_Score=179, Evalue=2e-45,
Organism=Caenorhabditis elegans, GI17553716, Length=360, Percent_Identity=29.4444444444444, Blast_Score=179, Evalue=4e-45,
Organism=Caenorhabditis elegans, GI115532546, Length=373, Percent_Identity=31.9034852546917, Blast_Score=173, Evalue=2e-43,
Organism=Caenorhabditis elegans, GI115532548, Length=373, Percent_Identity=31.9034852546917, Blast_Score=172, Evalue=5e-43,
Organism=Caenorhabditis elegans, GI17505370, Length=350, Percent_Identity=33.7142857142857, Blast_Score=166, Evalue=3e-41,
Organism=Caenorhabditis elegans, GI17508543, Length=379, Percent_Identity=30.0791556728232, Blast_Score=152, Evalue=3e-37,
Organism=Caenorhabditis elegans, GI193208216, Length=391, Percent_Identity=29.923273657289, Blast_Score=147, Evalue=9e-36,
Organism=Caenorhabditis elegans, GI71982862, Length=211, Percent_Identity=34.1232227488152, Blast_Score=144, Evalue=8e-35,
Organism=Caenorhabditis elegans, GI17556951, Length=341, Percent_Identity=29.3255131964809, Blast_Score=141, Evalue=7e-34,
Organism=Caenorhabditis elegans, GI25148203, Length=407, Percent_Identity=26.2899262899263, Blast_Score=137, Evalue=9e-33,
Organism=Caenorhabditis elegans, GI71990816, Length=380, Percent_Identity=31.3157894736842, Blast_Score=126, Evalue=3e-29,
Organism=Caenorhabditis elegans, GI17507641, Length=406, Percent_Identity=26.1083743842365, Blast_Score=115, Evalue=6e-26,
Organism=Caenorhabditis elegans, GI32564046, Length=382, Percent_Identity=26.7015706806283, Blast_Score=112, Evalue=5e-25,
Organism=Caenorhabditis elegans, GI71997889, Length=392, Percent_Identity=26.2755102040816, Blast_Score=106, Evalue=3e-23,
Organism=Caenorhabditis elegans, GI25148291, Length=357, Percent_Identity=26.3305322128852, Blast_Score=104, Evalue=1e-22,
Organism=Caenorhabditis elegans, GI25148205, Length=328, Percent_Identity=25.609756097561, Blast_Score=101, Evalue=9e-22,
Organism=Caenorhabditis elegans, GI71987152, Length=95, Percent_Identity=45.2631578947368, Blast_Score=94, Evalue=2e-19,
Organism=Saccharomyces cerevisiae, GI6320224, Length=379, Percent_Identity=35.0923482849604, Blast_Score=244, Evalue=2e-65,
Organism=Saccharomyces cerevisiae, GI6325138, Length=364, Percent_Identity=39.2857142857143, Blast_Score=230, Evalue=4e-61,
Organism=Saccharomyces cerevisiae, GI6321856, Length=358, Percent_Identity=39.1061452513966, Blast_Score=228, Evalue=2e-60,
Organism=Saccharomyces cerevisiae, GI6324778, Length=362, Percent_Identity=38.3977900552486, Blast_Score=221, Evalue=2e-58,
Organism=Saccharomyces cerevisiae, GI6324217, Length=355, Percent_Identity=34.3661971830986, Blast_Score=220, Evalue=4e-58,
Organism=Saccharomyces cerevisiae, GI6320041, Length=364, Percent_Identity=33.2417582417582, Blast_Score=216, Evalue=9e-57,
Organism=Saccharomyces cerevisiae, GI6322912, Length=376, Percent_Identity=34.3085106382979, Blast_Score=209, Evalue=8e-55,
Organism=Saccharomyces cerevisiae, GI6322323, Length=376, Percent_Identity=34.3085106382979, Blast_Score=209, Evalue=8e-55,
Organism=Saccharomyces cerevisiae, GI6323021, Length=408, Percent_Identity=32.843137254902, Blast_Score=207, Evalue=3e-54,
Organism=Saccharomyces cerevisiae, GI6321360, Length=339, Percent_Identity=38.6430678466077, Blast_Score=206, Evalue=7e-54,
Organism=Saccharomyces cerevisiae, GI6320119, Length=360, Percent_Identity=32.7777777777778, Blast_Score=205, Evalue=1e-53,
Organism=Saccharomyces cerevisiae, GI6324620, Length=353, Percent_Identity=33.1444759206799, Blast_Score=192, Evalue=9e-50,
Organism=Saccharomyces cerevisiae, GI6321963, Length=372, Percent_Identity=36.5591397849462, Blast_Score=191, Evalue=3e-49,
Organism=Saccharomyces cerevisiae, GI6320449, Length=354, Percent_Identity=33.8983050847458, Blast_Score=186, Evalue=5e-48,
Organism=Saccharomyces cerevisiae, GI6323947, Length=358, Percent_Identity=34.6368715083799, Blast_Score=186, Evalue=1e-47,
Organism=Saccharomyces cerevisiae, GI6322427, Length=369, Percent_Identity=33.0623306233062, Blast_Score=182, Evalue=1e-46,
Organism=Saccharomyces cerevisiae, GI6319618, Length=413, Percent_Identity=31.7191283292978, Blast_Score=171, Evalue=2e-43,
Organism=Saccharomyces cerevisiae, GI6321111, Length=377, Percent_Identity=30.7692307692308, Blast_Score=164, Evalue=4e-41,
Organism=Saccharomyces cerevisiae, GI6319714, Length=354, Percent_Identity=27.1186440677966, Blast_Score=149, Evalue=9e-37,
Organism=Saccharomyces cerevisiae, GI6321267, Length=367, Percent_Identity=31.6076294277929, Blast_Score=149, Evalue=1e-36,
Organism=Saccharomyces cerevisiae, GI6320400, Length=391, Percent_Identity=28.9002557544757, Blast_Score=137, Evalue=3e-33,
Organism=Saccharomyces cerevisiae, GI6323306, Length=424, Percent_Identity=26.4150943396226, Blast_Score=130, Evalue=3e-31,
Organism=Saccharomyces cerevisiae, GI6320173, Length=191, Percent_Identity=36.6492146596859, Blast_Score=129, Evalue=8e-31,
Organism=Saccharomyces cerevisiae, GI6324366, Length=348, Percent_Identity=26.4367816091954, Blast_Score=100, Evalue=4e-22,
Organism=Saccharomyces cerevisiae, GI6322876, Length=203, Percent_Identity=33.0049261083744, Blast_Score=92, Evalue=2e-19,
Organism=Saccharomyces cerevisiae, GI6321374, Length=405, Percent_Identity=23.2098765432099, Blast_Score=87, Evalue=4e-18,
Organism=Drosophila melanogaster, GI24645031, Length=365, Percent_Identity=36.7123287671233, Blast_Score=248, Evalue=8e-66,
Organism=Drosophila melanogaster, GI24662330, Length=359, Percent_Identity=39.5543175487465, Blast_Score=238, Evalue=6e-63,
Organism=Drosophila melanogaster, GI24584399, Length=439, Percent_Identity=33.9407744874715, Blast_Score=238, Evalue=7e-63,
Organism=Drosophila melanogaster, GI17977678, Length=371, Percent_Identity=36.1185983827493, Blast_Score=229, Evalue=3e-60,
Organism=Drosophila melanogaster, GI24585582, Length=360, Percent_Identity=36.9444444444444, Blast_Score=223, Evalue=3e-58,
Organism=Drosophila melanogaster, GI24642151, Length=359, Percent_Identity=34.8189415041783, Blast_Score=220, Evalue=2e-57,
Organism=Drosophila melanogaster, GI24582080, Length=372, Percent_Identity=34.6774193548387, Blast_Score=217, Evalue=1e-56,
Organism=Drosophila melanogaster, GI24582078, Length=372, Percent_Identity=34.6774193548387, Blast_Score=217, Evalue=1e-56,
Organism=Drosophila melanogaster, GI17136248, Length=372, Percent_Identity=34.6774193548387, Blast_Score=217, Evalue=1e-56,
Organism=Drosophila melanogaster, GI24582075, Length=372, Percent_Identity=34.6774193548387, Blast_Score=217, Evalue=1e-56,
Organism=Drosophila melanogaster, GI24584994, Length=382, Percent_Identity=35.6020942408377, Blast_Score=217, Evalue=1e-56,
Organism=Drosophila melanogaster, GI21356161, Length=358, Percent_Identity=37.4301675977654, Blast_Score=214, Evalue=1e-55,
Organism=Drosophila melanogaster, GI18857967, Length=367, Percent_Identity=34.6049046321526, Blast_Score=211, Evalue=8e-55,
Organism=Drosophila melanogaster, GI281361218, Length=369, Percent_Identity=35.7723577235772, Blast_Score=211, Evalue=9e-55,
Organism=Drosophila melanogaster, GI24644481, Length=369, Percent_Identity=35.7723577235772, Blast_Score=211, Evalue=9e-55,
Organism=Drosophila melanogaster, GI24644487, Length=369, Percent_Identity=35.7723577235772, Blast_Score=211, Evalue=1e-54,
Organism=Drosophila melanogaster, GI45551833, Length=369, Percent_Identity=35.7723577235772, Blast_Score=211, Evalue=1e-54,
Organism=Drosophila melanogaster, GI24644485, Length=369, Percent_Identity=35.7723577235772, Blast_Score=211, Evalue=1e-54,
Organism=Drosophila melanogaster, GI24644483, Length=369, Percent_Identity=35.7723577235772, Blast_Score=211, Evalue=1e-54,
Organism=Drosophila melanogaster, GI24644479, Length=369, Percent_Identity=35.7723577235772, Blast_Score=210, Evalue=1e-54,
Organism=Drosophila melanogaster, GI21355075, Length=355, Percent_Identity=33.2394366197183, Blast_Score=210, Evalue=1e-54,
Organism=Drosophila melanogaster, GI24583281, Length=349, Percent_Identity=32.378223495702, Blast_Score=210, Evalue=2e-54,
Organism=Drosophila melanogaster, GI24583279, Length=348, Percent_Identity=32.4712643678161, Blast_Score=209, Evalue=2e-54,
Organism=Drosophila melanogaster, GI24581954, Length=367, Percent_Identity=34.0599455040872, Blast_Score=208, Evalue=5e-54,
Organism=Drosophila melanogaster, GI24581952, Length=367, Percent_Identity=34.0599455040872, Blast_Score=208, Evalue=5e-54,
Organism=Drosophila melanogaster, GI24581956, Length=367, Percent_Identity=34.0599455040872, Blast_Score=208, Evalue=5e-54,
Organism=Drosophila melanogaster, GI28574962, Length=365, Percent_Identity=35.8904109589041, Blast_Score=207, Evalue=1e-53,
Organism=Drosophila melanogaster, GI17985987, Length=380, Percent_Identity=36.8421052631579, Blast_Score=204, Evalue=1e-52,
Organism=Drosophila melanogaster, GI28575014, Length=369, Percent_Identity=33.8753387533875, Blast_Score=197, Evalue=2e-50,
Organism=Drosophila melanogaster, GI17136814, Length=380, Percent_Identity=36.8421052631579, Blast_Score=193, Evalue=2e-49,
Organism=Drosophila melanogaster, GI28571808, Length=346, Percent_Identity=32.9479768786127, Blast_Score=172, Evalue=4e-43,
Organism=Drosophila melanogaster, GI28571809, Length=346, Percent_Identity=32.9479768786127, Blast_Score=172, Evalue=4e-43,
Organism=Drosophila melanogaster, GI21355559, Length=398, Percent_Identity=33.1658291457286, Blast_Score=171, Evalue=1e-42,
Organism=Drosophila melanogaster, GI281365720, Length=318, Percent_Identity=35.8490566037736, Blast_Score=169, Evalue=4e-42,
Organism=Drosophila melanogaster, GI24642822, Length=377, Percent_Identity=31.8302387267904, Blast_Score=165, Evalue=5e-41,
Organism=Drosophila melanogaster, GI24666101, Length=365, Percent_Identity=30.958904109589, Blast_Score=165, Evalue=6e-41,
Organism=Drosophila melanogaster, GI17647335, Length=364, Percent_Identity=29.9450549450549, Blast_Score=161, Evalue=1e-39,
Organism=Drosophila melanogaster, GI24643725, Length=391, Percent_Identity=28.3887468030691, Blast_Score=136, Evalue=4e-32,
Organism=Drosophila melanogaster, GI19920478, Length=343, Percent_Identity=30.6122448979592, Blast_Score=127, Evalue=1e-29,
Organism=Drosophila melanogaster, GI24668515, Length=328, Percent_Identity=30.1829268292683, Blast_Score=123, Evalue=3e-28,
Organism=Drosophila melanogaster, GI18859659, Length=197, Percent_Identity=35.5329949238579, Blast_Score=114, Evalue=2e-25,
Organism=Drosophila melanogaster, GI28571338, Length=197, Percent_Identity=35.5329949238579, Blast_Score=114, Evalue=2e-25,
Organism=Drosophila melanogaster, GI17136666, Length=417, Percent_Identity=27.5779376498801, Blast_Score=110, Evalue=1e-24,
Organism=Drosophila melanogaster, GI20130173, Length=318, Percent_Identity=27.3584905660377, Blast_Score=109, Evalue=4e-24,
Organism=Drosophila melanogaster, GI24640164, Length=353, Percent_Identity=23.5127478753541, Blast_Score=86, Evalue=6e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005580
- InterPro:   IPR014001
- InterPro:   IPR011545
- InterPro:   IPR001650
- InterPro:   IPR014021
- InterPro:   IPR000629
- InterPro:   IPR014014 [H]

Pfam domain/function: PF03880 DbpA; PF00270 DEAD; PF00271 Helicase_C [H]

EC number: =3.6.4.13 [H]

Molecular weight: Translated: 52164; Mature: 52164

Theoretical pI: Translated: 8.64; Mature: 8.64

Prosite motif: PS00039 DEAD_ATP_HELICASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIQSEHNDQHLSFSQFPLRQELIKSLASSNYENMTPIQMQSLPIILRNEDLIAQAKTGSG
CCCCCCCCCCCCHHCCCHHHHHHHHHHHCCCCCCCCEECCCCCEEEECCCEEEEECCCCC
KTAAFALSLLNNLKISFFAVQALVLCPTRELAEQVSQAIRRLACFMPNVKIINLSGGIPM
CHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCC
QPQLDSLRHGAHIIVGTPGRILKHLKNTSLDLSQVKALILDEADRMLDMGFFDDIKNIIS
CCCHHHHCCCCEEEEECCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHH
VCPKQRQTLLFSATYPEEIKRLSKQFMKDPKEVHVVTPPEEIDIEQHFYEVSRHAQKFPL
HCCCCCCEEEEECCCHHHHHHHHHHHHCCCCCEEEECCCHHCCHHHHHHHHHHHHHHHHH
LKSLLLHYQPVSVLIFCNTKQQTIEVTDQLINEGFSAIALNGDMEQIERDLAVLRFANKS
HHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHCCCCC
CSILVATDVAARGLDIKELSAVINFDLAFDHDVHIHRIGRTGRAGSKGIALSIVTPADAQ
CEEEEEECHHHCCCCHHHHHHHHEEEEEECCCEEEEEECCCCCCCCCCEEEEEECCCCCC
RICAIEDNYPHPIHWGNINELENHNTARLVPEMVTLCIASGKKDKIRPGDILGALTKDAG
EEEEEECCCCCCCCCCCCCHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCC
LAGNTIGKINITAMYSYVAIHRSQADKAYQYLQSGKLKGRKVNVRKIN
CCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECC
>Mature Secondary Structure
MIQSEHNDQHLSFSQFPLRQELIKSLASSNYENMTPIQMQSLPIILRNEDLIAQAKTGSG
CCCCCCCCCCCCHHCCCHHHHHHHHHHHCCCCCCCCEECCCCCEEEECCCEEEEECCCCC
KTAAFALSLLNNLKISFFAVQALVLCPTRELAEQVSQAIRRLACFMPNVKIINLSGGIPM
CHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCC
QPQLDSLRHGAHIIVGTPGRILKHLKNTSLDLSQVKALILDEADRMLDMGFFDDIKNIIS
CCCHHHHCCCCEEEEECCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHH
VCPKQRQTLLFSATYPEEIKRLSKQFMKDPKEVHVVTPPEEIDIEQHFYEVSRHAQKFPL
HCCCCCCEEEEECCCHHHHHHHHHHHHCCCCCEEEECCCHHCCHHHHHHHHHHHHHHHHH
LKSLLLHYQPVSVLIFCNTKQQTIEVTDQLINEGFSAIALNGDMEQIERDLAVLRFANKS
HHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHCCCCC
CSILVATDVAARGLDIKELSAVINFDLAFDHDVHIHRIGRTGRAGSKGIALSIVTPADAQ
CEEEEEECHHHCCCCHHHHHHHHEEEEEECCCEEEEEECCCCCCCCCCEEEEEECCCCCC
RICAIEDNYPHPIHWGNINELENHNTARLVPEMVTLCIASGKKDKIRPGDILGALTKDAG
EEEEEECCCCCCCCCCCCCHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCC
LAGNTIGKINITAMYSYVAIHRSQADKAYQYLQSGKLKGRKVNVRKIN
CCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2216714; 8253085; 9097039; 9278503; 9016593; 11350034 [H]