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The map label for this gene is 54294890

Identifier: 54294890

GI number: 54294890

Start: 2210975

End: 2211835

Strand: Direct

Name: 54294890

Synonym: lpl1969

Alternate gene names: NA

Gene position: 2210975-2211835 (Clockwise)

Preceding gene: 54294886

Following gene: 54294895

Centisome position: 66.08

GC content: 37.51

Gene sequence:

>861_bases
ATGTTAAAACGTCTACTCGGTGTAGCATCATTATTTTTAATATTGAACCATCATTGCTTCGCTGAAGATCATGAAATTGC
CATTACTATTGACGATTTACCTTTTGTGGGCTCTGGAACAAGTACTCCAGGAAATCTGAAGCGAACCCAGGAAAGATTTA
TGGCCATAGTGAACACTTTGGTTGACAATCAGGTTCCTGCCACAGGTTTTGCCATAGGAGGGGCTATAGCGAAAAATGAA
TGGGAGCTTCTGGAAATTTTTCGTAATCAAGGTTTTTCAATTGGCAACCATACCTATAAGCATCGAAGTTTAAATTCAAT
GACTGCAGAAAATTATATTGCTGATATCGAAAAAGCGGATACCGTTCTATCCCCGGTTATGACTGAGCCAAAATATTTCC
GTTATCCTTATCTTGCTGAAGGCAGTGGAGAAAAGAAGCAAAAAGTGCATGAGTGGCTGGCTGCCCATCAATACACGATT
GCTCCTGTCACTATAGATAGCAAAGATTATGAATTCAATGCGCAATTTTATAGAATACCATATAGACAAAGACCACAACG
TTTAGCTCAATTTAAAAAACGCTATCTTGCTTTTATCTGGCAACAGACCCTGAGAGCAGAAAAAAAAGTCAAGAAAGTAG
AAGGACAACCTGTTAAACATATTTTACTCATCCATGCGAATCTGATTAATAGTTTGTGTTTGGCTGATATCATTGAAATG
TATAGAAGCAACGGTTATAAATTCATTACTCTGCAAGAGGCTCTAAAAGGGAATACAGCTACTCCAATTAATGATTCATC
ACCAACTGAAGCTTTGAAATCGGAAACCGAAAAGAAAGAAATTAATGAGCCTCAATCTTAA

Upstream 100 bases:

>100_bases
ATACATATTTCCAAACAGGTGGAAATTTAATTTATCGTCTATAGTTAAATTAAATGCCTAAAATAATAAGAAATTTTCCA
AATTGAAAAGAGGGGAAAAT

Downstream 100 bases:

>100_bases
AAAATATAGAGTTATTTCTTGAAACAAATGATTTACAATGCTATCGGGGATTCATTGTCACAGGACTGGTGAATCCCAAT
AGCCAAATAAAAAATTGCAA

Product: hypothetical protein

Products: NA

Alternate protein names: Polysaccharide Deacetylase Family Protein; Polysaccharide Deacetylase-Related Protein; Polysaccharide Deacetylase Domain Protein; Peptidoglycan GlcNAc Deacetylase Proteins; Polysaccharide Deacetylase Family

Number of amino acids: Translated: 286; Mature: 286

Protein sequence:

>286_residues
MLKRLLGVASLFLILNHHCFAEDHEIAITIDDLPFVGSGTSTPGNLKRTQERFMAIVNTLVDNQVPATGFAIGGAIAKNE
WELLEIFRNQGFSIGNHTYKHRSLNSMTAENYIADIEKADTVLSPVMTEPKYFRYPYLAEGSGEKKQKVHEWLAAHQYTI
APVTIDSKDYEFNAQFYRIPYRQRPQRLAQFKKRYLAFIWQQTLRAEKKVKKVEGQPVKHILLIHANLINSLCLADIIEM
YRSNGYKFITLQEALKGNTATPINDSSPTEALKSETEKKEINEPQS

Sequences:

>Translated_286_residues
MLKRLLGVASLFLILNHHCFAEDHEIAITIDDLPFVGSGTSTPGNLKRTQERFMAIVNTLVDNQVPATGFAIGGAIAKNE
WELLEIFRNQGFSIGNHTYKHRSLNSMTAENYIADIEKADTVLSPVMTEPKYFRYPYLAEGSGEKKQKVHEWLAAHQYTI
APVTIDSKDYEFNAQFYRIPYRQRPQRLAQFKKRYLAFIWQQTLRAEKKVKKVEGQPVKHILLIHANLINSLCLADIIEM
YRSNGYKFITLQEALKGNTATPINDSSPTEALKSETEKKEINEPQS
>Mature_286_residues
MLKRLLGVASLFLILNHHCFAEDHEIAITIDDLPFVGSGTSTPGNLKRTQERFMAIVNTLVDNQVPATGFAIGGAIAKNE
WELLEIFRNQGFSIGNHTYKHRSLNSMTAENYIADIEKADTVLSPVMTEPKYFRYPYLAEGSGEKKQKVHEWLAAHQYTI
APVTIDSKDYEFNAQFYRIPYRQRPQRLAQFKKRYLAFIWQQTLRAEKKVKKVEGQPVKHILLIHANLINSLCLADIIEM
YRSNGYKFITLQEALKGNTATPINDSSPTEALKSETEKKEINEPQS

Specific function: Unknown

COG id: COG0726

COG function: function code G; Predicted xylanase/chitin deacetylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32634; Mature: 32634

Theoretical pI: Translated: 8.89; Mature: 8.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKRLLGVASLFLILNHHCFAEDHEIAITIDDLPFVGSGTSTPGNLKRTQERFMAIVNTL
CHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
VDNQVPATGFAIGGAIAKNEWELLEIFRNQGFSIGNHTYKHRSLNSMTAENYIADIEKAD
HCCCCCCCHHHHCCHHCCCHHHHHHHHHHCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHH
TVLSPVMTEPKYFRYPYLAEGSGEKKQKVHEWLAAHQYTIAPVTIDSKDYEFNAQFYRIP
HHHHHHHCCCCCCCCCEEECCCCHHHHHHHHHHHHCCEEEEEEEECCCCCEECCEEEECC
YRQRPQRLAQFKKRYLAFIWQQTLRAEKKVKKVEGQPVKHILLIHANLINSLCLADIIEM
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
YRSNGYKFITLQEALKGNTATPINDSSPTEALKSETEKKEINEPQS
HHCCCCEEEEEHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MLKRLLGVASLFLILNHHCFAEDHEIAITIDDLPFVGSGTSTPGNLKRTQERFMAIVNTL
CHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
VDNQVPATGFAIGGAIAKNEWELLEIFRNQGFSIGNHTYKHRSLNSMTAENYIADIEKAD
HCCCCCCCHHHHCCHHCCCHHHHHHHHHHCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHH
TVLSPVMTEPKYFRYPYLAEGSGEKKQKVHEWLAAHQYTIAPVTIDSKDYEFNAQFYRIP
HHHHHHHCCCCCCCCCEEECCCCHHHHHHHHHHHHCCEEEEEEEECCCCCEECCEEEECC
YRQRPQRLAQFKKRYLAFIWQQTLRAEKKVKKVEGQPVKHILLIHANLINSLCLADIIEM
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
YRSNGYKFITLQEALKGNTATPINDSSPTEALKSETEKKEINEPQS
HHCCCCEEEEEHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA