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The map label for this gene is 54294868

Identifier: 54294868

GI number: 54294868

Start: 2186176

End: 2186526

Strand: Direct

Name: 54294868

Synonym: lpl1947

Alternate gene names: NA

Gene position: 2186176-2186526 (Clockwise)

Preceding gene: 54294867

Following gene: 54294872

Centisome position: 65.34

GC content: 36.47

Gene sequence:

>351_bases
ATGCTTCAATCGCCTAACCTAATCAGTCACCCTAAACCACAATTAAATTTTTCAACTGGAGAAGAAATTGCTCCTGGCGT
AGTAGTCAACCCTATTGATTTTAGTTTTAATCAGATAAAACCTCCCTTTAATAGTACCGTATTTCATTTATCACCTGGTA
GTCAAACCACATTAGACTCTCATCGGGAAAAAGAAATTTGGATTGTATTAGAAGGCAGTGGCATCCTGATTTATGAGGGA
TTATCGTTTATCCTCAAGTCACAAGAGGCATTCTTTTTTCCACCGTTCAAGACTCATCAAGCTGTGAACAATACAGAAAA
CTTGCTCTTCATTTGTTCTATTTATTGGTAA

Upstream 100 bases:

>100_bases
ATCAATAGCATTATTCAAAAACCTATCTATGATCTCAGTAGTGAAAGTAGCGCCTTAAGTTGGGAACCCGAGATTATATC
TCAAAATCAGGAATGTAAAT

Downstream 100 bases:

>100_bases
GTCTATGATGACCCAATCTATTGACACAATAACCAAGTAAAGCATCCCAATGGGCACCATTACGGCAATTGGGAGCTTTT
AATTATCAGATAAGTGCAAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 116; Mature: 116

Protein sequence:

>116_residues
MLQSPNLISHPKPQLNFSTGEEIAPGVVVNPIDFSFNQIKPPFNSTVFHLSPGSQTTLDSHREKEIWIVLEGSGILIYEG
LSFILKSQEAFFFPPFKTHQAVNNTENLLFICSIYW

Sequences:

>Translated_116_residues
MLQSPNLISHPKPQLNFSTGEEIAPGVVVNPIDFSFNQIKPPFNSTVFHLSPGSQTTLDSHREKEIWIVLEGSGILIYEG
LSFILKSQEAFFFPPFKTHQAVNNTENLLFICSIYW
>Mature_116_residues
MLQSPNLISHPKPQLNFSTGEEIAPGVVVNPIDFSFNQIKPPFNSTVFHLSPGSQTTLDSHREKEIWIVLEGSGILIYEG
LSFILKSQEAFFFPPFKTHQAVNNTENLLFICSIYW

Specific function: Unknown

COG id: COG0662

COG function: function code G; Mannose-6-phosphate isomerase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13123; Mature: 13123

Theoretical pI: Translated: 5.50; Mature: 5.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLQSPNLISHPKPQLNFSTGEEIAPGVVVNPIDFSFNQIKPPFNSTVFHLSPGSQTTLDS
CCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCEEEEECCCCCCCCCC
HREKEIWIVLEGSGILIYEGLSFILKSQEAFFFPPFKTHQAVNNTENLLFICSIYW
CCCCEEEEEEECCCEEEECCCEEEEECCCCEEECCCCCCCCCCCCCCEEEEEEEEC
>Mature Secondary Structure
MLQSPNLISHPKPQLNFSTGEEIAPGVVVNPIDFSFNQIKPPFNSTVFHLSPGSQTTLDS
CCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCEEEEECCCCCCCCCC
HREKEIWIVLEGSGILIYEGLSFILKSQEAFFFPPFKTHQAVNNTENLLFICSIYW
CCCCEEEEEEECCCEEEECCCEEEEECCCCEEECCCCCCCCCCCCCCEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA