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The map label for this gene is 54294847

Identifier: 54294847

GI number: 54294847

Start: 2164000

End: 2164812

Strand: Direct

Name: 54294847

Synonym: lpl1926

Alternate gene names: NA

Gene position: 2164000-2164812 (Clockwise)

Preceding gene: 54294842

Following gene: 54294849

Centisome position: 64.68

GC content: 33.58

Gene sequence:

>813_bases
ATGTATGAACTGAATGACACACCCTATTTTATATACAGCAATTTAATACAGGAATATTGTTCCCCTCTCTTTAATCTGAC
ACCTATTAAAGGGTTTACTTTTTGTCGCACATATGGAGATAAAACGGCTTTTTTATTAACCAGTGAATATCAATTCCATA
TAGAATGCATCCAACACGAAAAGAAAATTTCCAAACTTAATATGTTGCGTACACCTGAGTATACTCAAGCCGGCTATTTT
CTTAACTCCCCTGCTCTTGATGGCAAATACTCTCCCTTTTACGAAAGTACCGCTCAAAAATATGGTTATGGATTTAGCTT
TACTATTGTCAGGAAAAATGAGAATCACTGCGATTATTTTCATTTTATAGGGAACAGGCATCAAAAAGATATGAATAATT
ATTATCTTCATAATAAATGGTTACTGGATAAGTTTTGCGACTATTTTCTTGAACGGGCAGCGAAAGTATTAGCTTACAGT
GAGAAAGAAAATAGATTCACGCTAACCAATACAGCAGAACATCCTTTTCCTCTTAAAATTCATTCAAGTGCGTTAGATCA
ATTTTTAAAAGACTATCATTTTGAACAATTTGGACTTAAACCAGTTTGCTTGCCTAAACGACAAATTGAATGTGCGCAGT
TATTAGTCCGTGGAAAAACAGCAGAGGAAATAGCTATTATTCTTAACTTATCAAAGCGCACTGTTGAACACTATATTAAC
ATCTTAAAAAGAAAACTAAATGCCCATAACAAAGGACTCCTTATTACAAAATTGCTTCACCAGTATCCTGACATGTTTGA
ATCAATTCTCTAG

Upstream 100 bases:

>100_bases
TCCTCAAAAATTACATAAGATATACAGAGGCCAAAAACAACCTTGGAAAATCGGTGTTTTTTATACTAGTATTTAAAGAG
AGTAAGCATTATTTTTATAT

Downstream 100 bases:

>100_bases
GTAGAGGTAATGTTCTGTATGTAAAAATCTCATGGGGGAGGAGATGACTCGAGAAATTTCACTGGCTCCAAAGTCTCAGA
GGTGACAAAAAACTGGGATG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 270; Mature: 270

Protein sequence:

>270_residues
MYELNDTPYFIYSNLIQEYCSPLFNLTPIKGFTFCRTYGDKTAFLLTSEYQFHIECIQHEKKISKLNMLRTPEYTQAGYF
LNSPALDGKYSPFYESTAQKYGYGFSFTIVRKNENHCDYFHFIGNRHQKDMNNYYLHNKWLLDKFCDYFLERAAKVLAYS
EKENRFTLTNTAEHPFPLKIHSSALDQFLKDYHFEQFGLKPVCLPKRQIECAQLLVRGKTAEEIAIILNLSKRTVEHYIN
ILKRKLNAHNKGLLITKLLHQYPDMFESIL

Sequences:

>Translated_270_residues
MYELNDTPYFIYSNLIQEYCSPLFNLTPIKGFTFCRTYGDKTAFLLTSEYQFHIECIQHEKKISKLNMLRTPEYTQAGYF
LNSPALDGKYSPFYESTAQKYGYGFSFTIVRKNENHCDYFHFIGNRHQKDMNNYYLHNKWLLDKFCDYFLERAAKVLAYS
EKENRFTLTNTAEHPFPLKIHSSALDQFLKDYHFEQFGLKPVCLPKRQIECAQLLVRGKTAEEIAIILNLSKRTVEHYIN
ILKRKLNAHNKGLLITKLLHQYPDMFESIL
>Mature_270_residues
MYELNDTPYFIYSNLIQEYCSPLFNLTPIKGFTFCRTYGDKTAFLLTSEYQFHIECIQHEKKISKLNMLRTPEYTQAGYF
LNSPALDGKYSPFYESTAQKYGYGFSFTIVRKNENHCDYFHFIGNRHQKDMNNYYLHNKWLLDKFCDYFLERAAKVLAYS
EKENRFTLTNTAEHPFPLKIHSSALDQFLKDYHFEQFGLKPVCLPKRQIECAQLLVRGKTAEEIAIILNLSKRTVEHYIN
ILKRKLNAHNKGLLITKLLHQYPDMFESIL

Specific function: Unknown

COG id: COG2771

COG function: function code K; DNA-binding HTH domain-containing proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31991; Mature: 31991

Theoretical pI: Translated: 8.59; Mature: 8.59

Prosite motif: PS50043 HTH_LUXR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYELNDTPYFIYSNLIQEYCSPLFNLTPIKGFTFCRTYGDKTAFLLTSEYQFHIECIQHE
CCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHEEECCCCEEEEEECCCHHHHHHHHHH
KKISKLNMLRTPEYTQAGYFLNSPALDGKYSPFYESTAQKYGYGFSFTIVRKNENHCDYF
HHHHHHHHCCCCCCCCCCEEECCCCCCCCCCCHHHHHHHHCCCCEEEEEEECCCCCCHHH
HFIGNRHQKDMNNYYLHNKWLLDKFCDYFLERAAKVLAYSEKENRFTLTNTAEHPFPLKI
HHHCCCHHHHCCCEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCEEE
HSSALDQFLKDYHFEQFGLKPVCLPKRQIECAQLLVRGKTAEEIAIILNLSKRTVEHYIN
CHHHHHHHHHHHCHHHHCCCCCCCCHHHHHHHHHHHCCCCHHHEEEEEECHHHHHHHHHH
ILKRKLNAHNKGLLITKLLHQYPDMFESIL
HHHHHHCCCCCCHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MYELNDTPYFIYSNLIQEYCSPLFNLTPIKGFTFCRTYGDKTAFLLTSEYQFHIECIQHE
CCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHEEECCCCEEEEEECCCHHHHHHHHHH
KKISKLNMLRTPEYTQAGYFLNSPALDGKYSPFYESTAQKYGYGFSFTIVRKNENHCDYF
HHHHHHHHCCCCCCCCCCEEECCCCCCCCCCCHHHHHHHHCCCCEEEEEEECCCCCCHHH
HFIGNRHQKDMNNYYLHNKWLLDKFCDYFLERAAKVLAYSEKENRFTLTNTAEHPFPLKI
HHHCCCHHHHCCCEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCEEE
HSSALDQFLKDYHFEQFGLKPVCLPKRQIECAQLLVRGKTAEEIAIILNLSKRTVEHYIN
CHHHHHHHHHHHCHHHHCCCCCCCCHHHHHHHHHHHCCCCHHHEEEEEECHHHHHHHHHH
ILKRKLNAHNKGLLITKLLHQYPDMFESIL
HHHHHHCCCCCCHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA