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The map label for this gene is 54294812

Identifier: 54294812

GI number: 54294812

Start: 2116330

End: 2118975

Strand: Direct

Name: 54294812

Synonym: lpl1889

Alternate gene names: NA

Gene position: 2116330-2118975 (Clockwise)

Preceding gene: 54294811

Following gene: 54294813

Centisome position: 63.26

GC content: 36.81

Gene sequence:

>2646_bases
ATGGACGTTGGCCAAAAGATAAGGATTTTAAAACGTTATTTAAAAGAAAAAAGTGTCGCGCCAGAAGACGTCAATCTCAA
TGATCAAGATCTAACGGCCTATGCCAAGCTGGATAAGCTATTGGATTATATTTCTATACATAACAATGGATTGTTTGACT
TCACAACATTGGAATCTGATGAAAAGCAATGGAAACAATATGTGGATATACTTAACTATTCCGCAACCTGTTCACCAGGC
TCTCCCCCTGCTTTAATCGATACCAGTGAACGCAAAGCTCAATTTGGTTTGCAATATTGGCTGAATACGAGAACGATTGA
AGCACTGCCAAGAGACAACTATTATACTCGTACAGTTACCTTATCCGAAGAAGCAGATGAAGAATTTGATCAGCTAATTA
CAGAAAGCAGAGCCAAATTGTATGAGATAGCGCAAACTTTTCCAGAAATCAGCTCTTTTAATCCAGCAAATATTATCCAG
GTGACCAACCAAATCTCTTCGATTAAAGAAAAACTGGATACTTTGACAAGCAATAATCCTCAAATAACCCTTTTACAAAA
AAAACTCAACGTACTAACAGATTTAAACAAGATTAATCAACTCAAGAGGCTCAATATTCCCCAAGACAATGGTTCTAACT
TGAGTTATTGTACGCTCGCAGAGACTATTGAAGGAGTTACTGAGAAAATACCTTTAATAACACTTGCTAAAGTGAAAGAG
CAATTGAGACATCTTTGCGCTCAAAATGAGCTTGATTTGGATAGTTATAGTGAGTCAAGAGAACAATATTATAAACTTGG
TATAGAAGGGATACTTAAATTACCCAAGCATGGCGACATAAAAGAAGTACAACGTGAAGCCATGGCTCTTAACATCTCAA
GATTAATGGGTTTAGACACTACTTCTTCAACAACAGTAAGCTATAATGGTCATCCGGCCTTGTTTATTCCTTTTGACAAC
ATCAATCTATTAAATGAATTTTCTTCAGGTAAAATTTTTAAAGTAGGCATGGGGTTAAGGGGGCAAAGTTATACCCATTA
CTCCACAATTAAACCATTAGGTGAAGGAATCCAAGCAGATCTTTATATCAAGGATTTTGGCCATGCTCTGGCATTACTTT
ATTTATGTTGTGATACGGATGCTATAGGTGGGTATTGTAAAAACAAAGCATTAAGAAACTACAGTAGCCTTTATATTTTT
GATCAGGTCATTACGGACACTGATAAATTTATCCTTGATTCACGAATTAGTCTTCAACCCGATCAGTTCATTATGAAACA
TACCCGTCATGGACAAGGGAGAAACAGAACCTTAATCGAGGATTCTTCTCTGGTTACCAAATACACCAGTATCGTGCGAC
TTAAAGAGTTAAAACGCATTATTACCCAATACTGTGATCATATTTCATGGCTGCATCATAATCGTACTCAAGCCATTAAA
AAACAATTGCAAGAAGAACTTGCAAAAGACGAACGCGTACGATTAACAGAAGAGTTAAATGATGTTGAAATTTTGGAAAA
AGATGCTGAGCAAATAAAAAGCCAAATTCTAATTCGCATCAATAAAATAGCCGAGGTGCTACCTCAAACAACTGGGCCCG
TTGGCTCCGATGTCATCCGGCAATGTTTAATTCTGGAGAAATTATTACACAACCCGGTTCTCTACTCTGATGATGGAAGA
CCTTATAAAAATCCATGGACGACACGACAAGCGAATACAGCACAAACGATCAATGATTTACAAAACGGGAAGATACAAAT
TACTTTTAAATTCAATATTCCAGAAGAAATGGTCGACTTTATCAAACGCCATGGTGGTGGAAATTCACTGACTATCAGCT
CTCCTAAAGTGATAACGATTAGCAAAGCCCATCTGGATGGCCTTAGGGAAAATATGTTGCATCCTGAACATTCACCTAAA
TTGTCTCTTTATACTAATTATTTAGACGATAAAGACCTCTGTATTATAAAAATGGCTTATCGTATAGGTAATAGAACCAA
AATTTTAAATGCTATTGCAGAATACCGCGCCCTTATGAATAATGAACAAGTAAGCTTCCATAACAAAATAGAATGTCTTG
CCCAAACTGAAGCGAAAATCAAAGCACTGATAGAGTTGGCAAATGACAAAGGCTTGGGGATGCACATTCTAAAGAAATTC
TATTTTGATGCGCAGCAACGACTCCAAAAATTAATTAATCCAGAAGTGTTGCCCCATGACATTGGTCAAGCCTTTGCCGC
CGCTCTTAGGCTGGACAGAGTATCAGAATTCAACAAGGTTGTGAGAGAAGCTATTGTCCAAAATAAAGTGACTGACCCTC
AGTTTGCAATTTTTTTGACAAGTTGCATCAAAATTGAATTTCTTGCCAAAAATTATAAAGACGCACAAAAAGCAAGCAGA
GCCTTATTAATCGAGTCTCAGCGAATTATAAATCATCTAAAATCGCCTGTAGTTCCTTTAATTGTTCAATTAGGAGGGCA
ATTGCATTCACAGGCTGAATTAGATACGGATGGGTTAGCCAATCTTGAAAATGACCTACAGCTTGATTTTGAGAAACCAG
ATACAGAATCAATGACCACTATGGATTTACATCAGGCTGTTACGAAAGAAAAAATGATTGGAGATGGAATGACAGTAAAA
GTTTAA

Upstream 100 bases:

>100_bases
TAATTAAAAATAACTAAAAATTTGAAGGAAAACATTGAATAGGAAAAGTATTTTTATAAATATGGAAATAAGTCTGATTG
ATACTATAAGGAAATAGGCA

Downstream 100 bases:

>100_bases
TAGATTTCTTTTAAAACTATCTGTAATACAGCAAATGAAAAGAGAGATGTTTAAACTTGGAATAATGGAGTGACTATGCC
AGTACATGAAAGGCGTCAAC

Product: hypothetical protein

Products: NA

Alternate protein names: Coiled-Coil Protein

Number of amino acids: Translated: 881; Mature: 881

Protein sequence:

>881_residues
MDVGQKIRILKRYLKEKSVAPEDVNLNDQDLTAYAKLDKLLDYISIHNNGLFDFTTLESDEKQWKQYVDILNYSATCSPG
SPPALIDTSERKAQFGLQYWLNTRTIEALPRDNYYTRTVTLSEEADEEFDQLITESRAKLYEIAQTFPEISSFNPANIIQ
VTNQISSIKEKLDTLTSNNPQITLLQKKLNVLTDLNKINQLKRLNIPQDNGSNLSYCTLAETIEGVTEKIPLITLAKVKE
QLRHLCAQNELDLDSYSESREQYYKLGIEGILKLPKHGDIKEVQREAMALNISRLMGLDTTSSTTVSYNGHPALFIPFDN
INLLNEFSSGKIFKVGMGLRGQSYTHYSTIKPLGEGIQADLYIKDFGHALALLYLCCDTDAIGGYCKNKALRNYSSLYIF
DQVITDTDKFILDSRISLQPDQFIMKHTRHGQGRNRTLIEDSSLVTKYTSIVRLKELKRIITQYCDHISWLHHNRTQAIK
KQLQEELAKDERVRLTEELNDVEILEKDAEQIKSQILIRINKIAEVLPQTTGPVGSDVIRQCLILEKLLHNPVLYSDDGR
PYKNPWTTRQANTAQTINDLQNGKIQITFKFNIPEEMVDFIKRHGGGNSLTISSPKVITISKAHLDGLRENMLHPEHSPK
LSLYTNYLDDKDLCIIKMAYRIGNRTKILNAIAEYRALMNNEQVSFHNKIECLAQTEAKIKALIELANDKGLGMHILKKF
YFDAQQRLQKLINPEVLPHDIGQAFAAALRLDRVSEFNKVVREAIVQNKVTDPQFAIFLTSCIKIEFLAKNYKDAQKASR
ALLIESQRIINHLKSPVVPLIVQLGGQLHSQAELDTDGLANLENDLQLDFEKPDTESMTTMDLHQAVTKEKMIGDGMTVK
V

Sequences:

>Translated_881_residues
MDVGQKIRILKRYLKEKSVAPEDVNLNDQDLTAYAKLDKLLDYISIHNNGLFDFTTLESDEKQWKQYVDILNYSATCSPG
SPPALIDTSERKAQFGLQYWLNTRTIEALPRDNYYTRTVTLSEEADEEFDQLITESRAKLYEIAQTFPEISSFNPANIIQ
VTNQISSIKEKLDTLTSNNPQITLLQKKLNVLTDLNKINQLKRLNIPQDNGSNLSYCTLAETIEGVTEKIPLITLAKVKE
QLRHLCAQNELDLDSYSESREQYYKLGIEGILKLPKHGDIKEVQREAMALNISRLMGLDTTSSTTVSYNGHPALFIPFDN
INLLNEFSSGKIFKVGMGLRGQSYTHYSTIKPLGEGIQADLYIKDFGHALALLYLCCDTDAIGGYCKNKALRNYSSLYIF
DQVITDTDKFILDSRISLQPDQFIMKHTRHGQGRNRTLIEDSSLVTKYTSIVRLKELKRIITQYCDHISWLHHNRTQAIK
KQLQEELAKDERVRLTEELNDVEILEKDAEQIKSQILIRINKIAEVLPQTTGPVGSDVIRQCLILEKLLHNPVLYSDDGR
PYKNPWTTRQANTAQTINDLQNGKIQITFKFNIPEEMVDFIKRHGGGNSLTISSPKVITISKAHLDGLRENMLHPEHSPK
LSLYTNYLDDKDLCIIKMAYRIGNRTKILNAIAEYRALMNNEQVSFHNKIECLAQTEAKIKALIELANDKGLGMHILKKF
YFDAQQRLQKLINPEVLPHDIGQAFAAALRLDRVSEFNKVVREAIVQNKVTDPQFAIFLTSCIKIEFLAKNYKDAQKASR
ALLIESQRIINHLKSPVVPLIVQLGGQLHSQAELDTDGLANLENDLQLDFEKPDTESMTTMDLHQAVTKEKMIGDGMTVK
V
>Mature_881_residues
MDVGQKIRILKRYLKEKSVAPEDVNLNDQDLTAYAKLDKLLDYISIHNNGLFDFTTLESDEKQWKQYVDILNYSATCSPG
SPPALIDTSERKAQFGLQYWLNTRTIEALPRDNYYTRTVTLSEEADEEFDQLITESRAKLYEIAQTFPEISSFNPANIIQ
VTNQISSIKEKLDTLTSNNPQITLLQKKLNVLTDLNKINQLKRLNIPQDNGSNLSYCTLAETIEGVTEKIPLITLAKVKE
QLRHLCAQNELDLDSYSESREQYYKLGIEGILKLPKHGDIKEVQREAMALNISRLMGLDTTSSTTVSYNGHPALFIPFDN
INLLNEFSSGKIFKVGMGLRGQSYTHYSTIKPLGEGIQADLYIKDFGHALALLYLCCDTDAIGGYCKNKALRNYSSLYIF
DQVITDTDKFILDSRISLQPDQFIMKHTRHGQGRNRTLIEDSSLVTKYTSIVRLKELKRIITQYCDHISWLHHNRTQAIK
KQLQEELAKDERVRLTEELNDVEILEKDAEQIKSQILIRINKIAEVLPQTTGPVGSDVIRQCLILEKLLHNPVLYSDDGR
PYKNPWTTRQANTAQTINDLQNGKIQITFKFNIPEEMVDFIKRHGGGNSLTISSPKVITISKAHLDGLRENMLHPEHSPK
LSLYTNYLDDKDLCIIKMAYRIGNRTKILNAIAEYRALMNNEQVSFHNKIECLAQTEAKIKALIELANDKGLGMHILKKF
YFDAQQRLQKLINPEVLPHDIGQAFAAALRLDRVSEFNKVVREAIVQNKVTDPQFAIFLTSCIKIEFLAKNYKDAQKASR
ALLIESQRIINHLKSPVVPLIVQLGGQLHSQAELDTDGLANLENDLQLDFEKPDTESMTTMDLHQAVTKEKMIGDGMTVK
V

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 100249; Mature: 100249

Theoretical pI: Translated: 6.82; Mature: 6.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDVGQKIRILKRYLKEKSVAPEDVNLNDQDLTAYAKLDKLLDYISIHNNGLFDFTTLESD
CCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCH
EKQWKQYVDILNYSATCSPGSPPALIDTSERKAQFGLQYWLNTRTIEALPRDNYYTRTVT
HHHHHHHHHHHCCCCCCCCCCCCCEEECCHHHHHHHHHHHHCCCEEEECCCCCCEEEEEE
LSEEADEEFDQLITESRAKLYEIAQTFPEISSFNPANIIQVTNQISSIKEKLDTLTSNNP
ECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC
QITLLQKKLNVLTDLNKINQLKRLNIPQDNGSNLSYCTLAETIEGVTEKIPLITLAKVKE
EEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEHHHHHHHHHHHHCCHHHHHHHHH
QLRHLCAQNELDLDSYSESREQYYKLGIEGILKLPKHGDIKEVQREAMALNISRLMGLDT
HHHHHHCCCCCCCHHHHHHHHHHHHHCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCC
TSSTTVSYNGHPALFIPFDNINLLNEFSSGKIFKVGMGLRGQSYTHYSTIKPLGEGIQAD
CCCCEEEECCCEEEEEECCCCHHHHHCCCCCEEEECCCCCCCCCCCHHHHHHHCCCCEEE
LYIKDFGHALALLYLCCDTDAIGGYCKNKALRNYSSLYIFDQVITDTDKFILDSRISLQP
EEHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCHHHHEEHHHHHHCCHHHHHCCCCCCCH
DQFIMKHTRHGQGRNRTLIEDSSLVTKYTSIVRLKELKRIITQYCDHISWLHHNRTQAIK
HHHHHHHHCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
KQLQEELAKDERVRLTEELNDVEILEKDAEQIKSQILIRINKIAEVLPQTTGPVGSDVIR
HHHHHHHHCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH
QCLILEKLLHNPVLYSDDGRPYKNPWTTRQANTAQTINDLQNGKIQITFKFNIPEEMVDF
HHHHHHHHHCCCCEECCCCCCCCCCCCCCCCCHHHHHHHCCCCEEEEEEEECCCHHHHHH
IKRHGGGNSLTISSPKVITISKAHLDGLRENMLHPEHSPKLSLYTNYLDDKDLCIIKMAY
HHHCCCCCEEEECCCCEEEEEHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCEEEEEHHH
RIGNRTKILNAIAEYRALMNNEQVSFHNKIECLAQTEAKIKALIELANDKGLGMHILKKF
HHCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
YFDAQQRLQKLINPEVLPHDIGQAFAAALRLDRVSEFNKVVREAIVQNKVTDPQFAIFLT
HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
SCIKIEFLAKNYKDAQKASRALLIESQRIINHLKSPVVPLIVQLGGQLHSQAELDTDGLA
HHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCHHHCCCCCCCCCCC
NLENDLQLDFEKPDTESMTTMDLHQAVTKEKMIGDGMTVKV
CCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEC
>Mature Secondary Structure
MDVGQKIRILKRYLKEKSVAPEDVNLNDQDLTAYAKLDKLLDYISIHNNGLFDFTTLESD
CCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCH
EKQWKQYVDILNYSATCSPGSPPALIDTSERKAQFGLQYWLNTRTIEALPRDNYYTRTVT
HHHHHHHHHHHCCCCCCCCCCCCCEEECCHHHHHHHHHHHHCCCEEEECCCCCCEEEEEE
LSEEADEEFDQLITESRAKLYEIAQTFPEISSFNPANIIQVTNQISSIKEKLDTLTSNNP
ECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC
QITLLQKKLNVLTDLNKINQLKRLNIPQDNGSNLSYCTLAETIEGVTEKIPLITLAKVKE
EEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEHHHHHHHHHHHHCCHHHHHHHHH
QLRHLCAQNELDLDSYSESREQYYKLGIEGILKLPKHGDIKEVQREAMALNISRLMGLDT
HHHHHHCCCCCCCHHHHHHHHHHHHHCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCC
TSSTTVSYNGHPALFIPFDNINLLNEFSSGKIFKVGMGLRGQSYTHYSTIKPLGEGIQAD
CCCCEEEECCCEEEEEECCCCHHHHHCCCCCEEEECCCCCCCCCCCHHHHHHHCCCCEEE
LYIKDFGHALALLYLCCDTDAIGGYCKNKALRNYSSLYIFDQVITDTDKFILDSRISLQP
EEHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCHHHHEEHHHHHHCCHHHHHCCCCCCCH
DQFIMKHTRHGQGRNRTLIEDSSLVTKYTSIVRLKELKRIITQYCDHISWLHHNRTQAIK
HHHHHHHHCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
KQLQEELAKDERVRLTEELNDVEILEKDAEQIKSQILIRINKIAEVLPQTTGPVGSDVIR
HHHHHHHHCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH
QCLILEKLLHNPVLYSDDGRPYKNPWTTRQANTAQTINDLQNGKIQITFKFNIPEEMVDF
HHHHHHHHHCCCCEECCCCCCCCCCCCCCCCCHHHHHHHCCCCEEEEEEEECCCHHHHHH
IKRHGGGNSLTISSPKVITISKAHLDGLRENMLHPEHSPKLSLYTNYLDDKDLCIIKMAY
HHHCCCCCEEEECCCCEEEEEHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCEEEEEHHH
RIGNRTKILNAIAEYRALMNNEQVSFHNKIECLAQTEAKIKALIELANDKGLGMHILKKF
HHCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
YFDAQQRLQKLINPEVLPHDIGQAFAAALRLDRVSEFNKVVREAIVQNKVTDPQFAIFLT
HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
SCIKIEFLAKNYKDAQKASRALLIESQRIINHLKSPVVPLIVQLGGQLHSQAELDTDGLA
HHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCHHHCCCCCCCCCCC
NLENDLQLDFEKPDTESMTTMDLHQAVTKEKMIGDGMTVKV
CCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA