| Definition | Legionella pneumophila str. Lens, complete genome. |
|---|---|
| Accession | NC_006369 |
| Length | 3,345,687 |
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The map label for this gene is ytfN [H]
Identifier: 54294694
GI number: 54294694
Start: 1976599
End: 1979139
Strand: Direct
Name: ytfN [H]
Synonym: lpl1771
Alternate gene names: 54294694
Gene position: 1976599-1979139 (Clockwise)
Preceding gene: 54294693
Following gene: 54294695
Centisome position: 59.08
GC content: 34.79
Gene sequence:
>2541_bases ATGATGATATTAAAATTTATCAAAAAAGGATTTTACTACTGCTTAATAACAGCAATATGTCTGGTTAGTTTGGTTATCTT TTTGATTTCAACTACCCCGGGGCTATATGCAGTAATTAAATTAACTCATTTATATCTTCCTGGCACTCTTAAAATACACC ATCTTAAAGGACAATTACTTGATCAATTTTCTATTGGTGAAATGGAATATCAACATCAAGGCACTAAAATAAAAATTTTT AACCTGGCGGTTAACTGGCGTTTCAGCTCATTGCTTCACAAAAAATTGCCTATTGATAGCATGAGTGCTGAAATGATTGA AATAAATCAAAAGACGCCCATGCTGATACTAAAAAATATCAAATTAAGCGGTTATTTAAATCAACAATCAATTAAACTGA ATACACTGCAATTTAATTATTGGAATCAATTGATTACCAGCCAATTAGAACTTAGCAACTCATTTCCTCATGTATTTTCA GGAAAAATTCGTTTAAACCCACATTCTACAAATAAGAATATATTCTCAGGAGGGGTAGACATTGGCGGTAATCGGAATCA AATTCAATGGGGAGGAGAATTTGAAGGCCCTGGAAAAATAACAATTAACGGCAGTCTTCAACAGTTAAAACAAATAAAAC AAATCATAAAATGGCGTGACTTACATTGGCAAGACAATAAAAATCACAATTTAAAAAGCTCGCAAGGAAGAATTGAGGTA TCGGGAACAATTCCAAATTTAGCTATCGACTTAAAATCCAAACTTGGCATAGATCAATTAAAAAATTGGCAAATGAACGC TGCAATTAAGGGCAAGCTGCCTTGGCAATGGAATATCAATGCTACGTTCTCTCAACCATTAGATTTCTCATCAAAACTTG ATGGTTTATATACAAAATTTGCTTTGAAAATGGAAACTAAAAATGACCATCATGCCGATTTTCTGATCACTATTGCTCCA GGCCATTATCAAATGACAGAAAACAATCTGATGCCGTTAATTCAGTTTACTGGCGGCAATATTAAAGGCTCTCTTTCCCA AAAACAATTCAGTGGACAAGGAGTTCTCTTTCTAGACGCATATAAAAAAGTCAATTTTAATTTTAAATTCCCGGAGTTTA ATGTCTACCAAGATATAGCACAACAAACAATTGATGCGAAACTATCCATTCTTTTTAACTCTCTGGATTTTTTGCAAAAT GCCAGTCCTTATTTAATAAATCCCAAGGGACAATTTCTCGCCTCCATTCATGCAAAGGGCACTTTAAATAAACCAATAAT TGAAAGCAAACTCGCTTTAAACAAAGGCTCATTTAATATCCCCGCTTTAGGTCTCAATATAACTGATATGGTATTAGCGG TTTTTAGCAAAAAAGATGGATGGGAAGCGACTGGCTCTATTCATTCATCTGAAAAAAAACTGACCTTAAAAGGACAAGGG ATTTTCAATAAAGAGCTTGGTGGGACTGTTTCAATAGAAGGTTCCAATTTTCCCATTGCAAATAATAAGGAATTCCAGGT TAATATATCTCCACAGTTACAGGTGCGCTTCACTCCATCGCTATGTCAAATCACTGGAACCATCCAAATTCCTAATGCCC ATATAAAACCACAAACGTTTACCAATAGTCTTGTGGCTACAGATGATATTGTATTTACGAGCAAGAATACTCAGCCGATT ACCCCACTCTTTAATACCAACATGTCGGTACGAGTTGAGATGGGAGAAGAAGTTGAGCTGACCTTTAAGGGATTGCATGC TTATTTGGCGGGTATAGTTACAATCAATCAATTATCGCAAGGACCCATAACGGCAAATGGTGAGTTAACTGTCAGAAAAG GAGAATATAAAGCCTATGGCCAGGATTTATCTATTGAACAAGGACAATTAATTTTTACAGGCGGTAGAATTGATAACCCA GAAATTAATTTAAGAGCATCGAAGAATATATCCAATTCATTTGGTAGTGTATCAGGATCCTCTGAGCTGTTTAATTTTAA TAATTATAATAACCTCAATGTTGGCAACAATTTTAATGTTGGGGTCGAAGTAGCTGGACGATTACAATCACCTAAAATTC AATTATTCTCTAACCCTCCAACACTTTCTCAAGCAGATATCCTATCTTTTCTTGTAATAGGCCGCCCAGCCAATCAAGCA GATAAGGCAAAAGGACAATTGCTTCTAACAGCGATCTCCTCGATGAATTTAGGTACAGGGACTAATGGAACCCAATTGCT GGAGCAATTAAAACAAAAATTAGGATTTGATTTTAACGTACAAACAACAACTAATTTTAATCAACAAACCAATAAAATCA GTGAATCAACCGGTGTTGTGGTTGGAAAATCTCTTTCAGATCGAATTTATTTAAGTTATAACGTCGGTTTGTCTCAAACT GACCCTAACGTATTAACATTAAAATATATACTAAATAAATTTTTAAGCATTCAGGTAAGCAGCAGTGATTCGGGTAATGG CGTCGATATTCTATATACTAAAAGCACATCATCACCAGAAAAAGCAAAACCTGACCAATAA
Upstream 100 bases:
>100_bases CTATTGGGCCAATTAAAGTTGGATTAGCCCAATCAGTCGATAATAAGATGGAGAGAATAGGACACAATCCAAGATTGGTT ATCAGTATGGGACCAGACTT
Downstream 100 bases:
>100_bases AACCTTAATCCACATTGTCTAAGGATGTAATAAATGATTAAATATAATTTGCCTTTAAGATTATCTCGTTTAAGAAAAAA TGCCATGTCAAGAGCATTAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 846; Mature: 846
Protein sequence:
>846_residues MMILKFIKKGFYYCLITAICLVSLVIFLISTTPGLYAVIKLTHLYLPGTLKIHHLKGQLLDQFSIGEMEYQHQGTKIKIF NLAVNWRFSSLLHKKLPIDSMSAEMIEINQKTPMLILKNIKLSGYLNQQSIKLNTLQFNYWNQLITSQLELSNSFPHVFS GKIRLNPHSTNKNIFSGGVDIGGNRNQIQWGGEFEGPGKITINGSLQQLKQIKQIIKWRDLHWQDNKNHNLKSSQGRIEV SGTIPNLAIDLKSKLGIDQLKNWQMNAAIKGKLPWQWNINATFSQPLDFSSKLDGLYTKFALKMETKNDHHADFLITIAP GHYQMTENNLMPLIQFTGGNIKGSLSQKQFSGQGVLFLDAYKKVNFNFKFPEFNVYQDIAQQTIDAKLSILFNSLDFLQN ASPYLINPKGQFLASIHAKGTLNKPIIESKLALNKGSFNIPALGLNITDMVLAVFSKKDGWEATGSIHSSEKKLTLKGQG IFNKELGGTVSIEGSNFPIANNKEFQVNISPQLQVRFTPSLCQITGTIQIPNAHIKPQTFTNSLVATDDIVFTSKNTQPI TPLFNTNMSVRVEMGEEVELTFKGLHAYLAGIVTINQLSQGPITANGELTVRKGEYKAYGQDLSIEQGQLIFTGGRIDNP EINLRASKNISNSFGSVSGSSELFNFNNYNNLNVGNNFNVGVEVAGRLQSPKIQLFSNPPTLSQADILSFLVIGRPANQA DKAKGQLLLTAISSMNLGTGTNGTQLLEQLKQKLGFDFNVQTTTNFNQQTNKISESTGVVVGKSLSDRIYLSYNVGLSQT DPNVLTLKYILNKFLSIQVSSSDSGNGVDILYTKSTSSPEKAKPDQ
Sequences:
>Translated_846_residues MMILKFIKKGFYYCLITAICLVSLVIFLISTTPGLYAVIKLTHLYLPGTLKIHHLKGQLLDQFSIGEMEYQHQGTKIKIF NLAVNWRFSSLLHKKLPIDSMSAEMIEINQKTPMLILKNIKLSGYLNQQSIKLNTLQFNYWNQLITSQLELSNSFPHVFS GKIRLNPHSTNKNIFSGGVDIGGNRNQIQWGGEFEGPGKITINGSLQQLKQIKQIIKWRDLHWQDNKNHNLKSSQGRIEV SGTIPNLAIDLKSKLGIDQLKNWQMNAAIKGKLPWQWNINATFSQPLDFSSKLDGLYTKFALKMETKNDHHADFLITIAP GHYQMTENNLMPLIQFTGGNIKGSLSQKQFSGQGVLFLDAYKKVNFNFKFPEFNVYQDIAQQTIDAKLSILFNSLDFLQN ASPYLINPKGQFLASIHAKGTLNKPIIESKLALNKGSFNIPALGLNITDMVLAVFSKKDGWEATGSIHSSEKKLTLKGQG IFNKELGGTVSIEGSNFPIANNKEFQVNISPQLQVRFTPSLCQITGTIQIPNAHIKPQTFTNSLVATDDIVFTSKNTQPI TPLFNTNMSVRVEMGEEVELTFKGLHAYLAGIVTINQLSQGPITANGELTVRKGEYKAYGQDLSIEQGQLIFTGGRIDNP EINLRASKNISNSFGSVSGSSELFNFNNYNNLNVGNNFNVGVEVAGRLQSPKIQLFSNPPTLSQADILSFLVIGRPANQA DKAKGQLLLTAISSMNLGTGTNGTQLLEQLKQKLGFDFNVQTTTNFNQQTNKISESTGVVVGKSLSDRIYLSYNVGLSQT DPNVLTLKYILNKFLSIQVSSSDSGNGVDILYTKSTSSPEKAKPDQ >Mature_846_residues MMILKFIKKGFYYCLITAICLVSLVIFLISTTPGLYAVIKLTHLYLPGTLKIHHLKGQLLDQFSIGEMEYQHQGTKIKIF NLAVNWRFSSLLHKKLPIDSMSAEMIEINQKTPMLILKNIKLSGYLNQQSIKLNTLQFNYWNQLITSQLELSNSFPHVFS GKIRLNPHSTNKNIFSGGVDIGGNRNQIQWGGEFEGPGKITINGSLQQLKQIKQIIKWRDLHWQDNKNHNLKSSQGRIEV SGTIPNLAIDLKSKLGIDQLKNWQMNAAIKGKLPWQWNINATFSQPLDFSSKLDGLYTKFALKMETKNDHHADFLITIAP GHYQMTENNLMPLIQFTGGNIKGSLSQKQFSGQGVLFLDAYKKVNFNFKFPEFNVYQDIAQQTIDAKLSILFNSLDFLQN ASPYLINPKGQFLASIHAKGTLNKPIIESKLALNKGSFNIPALGLNITDMVLAVFSKKDGWEATGSIHSSEKKLTLKGQG IFNKELGGTVSIEGSNFPIANNKEFQVNISPQLQVRFTPSLCQITGTIQIPNAHIKPQTFTNSLVATDDIVFTSKNTQPI TPLFNTNMSVRVEMGEEVELTFKGLHAYLAGIVTINQLSQGPITANGELTVRKGEYKAYGQDLSIEQGQLIFTGGRIDNP EINLRASKNISNSFGSVSGSSELFNFNNYNNLNVGNNFNVGVEVAGRLQSPKIQLFSNPPTLSQADILSFLVIGRPANQA DKAKGQLLLTAISSMNLGTGTNGTQLLEQLKQKLGFDFNVQTTTNFNQQTNKISESTGVVVGKSLSDRIYLSYNVGLSQT DPNVLTLKYILNKFLSIQVSSSDSGNGVDILYTKSTSSPEKAKPDQ
Specific function: Unknown
COG id: COG2911
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: To H.influenzae HI_0696 [H]
Homologues:
Organism=Escherichia coli, GI1790667, Length=380, Percent_Identity=27.8947368421053, Blast_Score=109, Evalue=9e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007452 [H]
Pfam domain/function: PF04357 DUF490 [H]
EC number: NA
Molecular weight: Translated: 93865; Mature: 93865
Theoretical pI: Translated: 9.97; Mature: 9.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMILKFIKKGFYYCLITAICLVSLVIFLISTTPGLYAVIKLTHLYLPGTLKIHHLKGQLL CHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCCEEEEEEECCHHH DQFSIGEMEYQHQGTKIKIFNLAVNWRFSSLLHKKLPIDSMSAEMIEINQKTPMLILKNI CCCCCCCEEECCCCCEEEEEEEEEECCHHHHHHHCCCCCCCCCEEEEECCCCCEEEEEEE KLSGYLNQQSIKLNTLQFNYWNQLITSQLELSNSFPHVFSGKIRLNPHSTNKNIFSGGVD EEEEEECCCEEEEEEEEEHHHHHHHHHHHHHCCCCCCEEECEEEECCCCCCCCEEECCEE IGGNRNQIQWGGEFEGPGKITINGSLQQLKQIKQIIKWRDLHWQDNKNHNLKSSQGRIEV CCCCCCEEEECCCCCCCCEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEE SGTIPNLAIDLKSKLGIDQLKNWQMNAAIKGKLPWQWNINATFSQPLDFSSKLDGLYTKF ECCCCCEEEEEHHHCCHHHHCCCEECEEEECCCCEEEECCCEECCCCCCCHHHCCEEEEE ALKMETKNDHHADFLITIAPGHYQMTENNLMPLIQFTGGNIKGSLSQKQFSGQGVLFLDA EEEEECCCCCCCEEEEEECCCCEEECCCCCEEEEEEECCCEECCCCHHHCCCCCEEEEEE YKKVNFNFKFPEFNVYQDIAQQTIDAKLSILFNSLDFLQNASPYLINPKGQFLASIHAKG EEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCEEEEEECCC TLNKPIIESKLALNKGSFNIPALGLNITDMVLAVFSKKDGWEATGSIHSSEKKLTLKGQG CCCCCHHHHHHEECCCCCCCCEECCCHHHHHHHHHCCCCCCCCCCCEECCCCEEEEECCC IFNKELGGTVSIEGSNFPIANNKEFQVNISPQLQVRFTPSLCQITGTIQIPNAHIKPQTF EEECCCCCEEEECCCCCCCCCCCEEEEEECCEEEEEECCCEEEEEEEEECCCCCCCCCCC TNSLVATDDIVFTSKNTQPITPLFNTNMSVRVEMGEEVELTFKGLHAYLAGIVTINQLSQ CCCEEEECEEEEECCCCCCCCCEECCCEEEEEECCCEEEEEHHHHHHHHHHHHEEECCCC GPITANGELTVRKGEYKAYGQDLSIEQGQLIFTGGRIDNPEINLRASKNISNSFGSVSGS CCEECCCEEEEECCCCEECCCCCCCCCCEEEEECCCCCCCEEEEEECCCCCCCCCCCCCC SELFNFNNYNNLNVGNNFNVGVEVAGRLQSPKIQLFSNPPTLSQADILSFLVIGRPANQA CCEEECCCCCCCCCCCCCCEEEEEECCCCCCEEEEECCCCCCCHHHHHEEEEECCCCCCC DKAKGQLLLTAISSMNLGTGTNGTQLLEQLKQKLGFDFNVQTTTNFNQQTNKISESTGVV HHCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHCCCCCEE VGKSLSDRIYLSYNVGLSQTDPNVLTLKYILNKFLSIQVSSSDSGNGVDILYTKSTSSPE EECCCCCEEEEEEECCCCCCCCCEEEHHHHHHHHEEEEEECCCCCCCEEEEEECCCCCCC KAKPDQ CCCCCC >Mature Secondary Structure MMILKFIKKGFYYCLITAICLVSLVIFLISTTPGLYAVIKLTHLYLPGTLKIHHLKGQLL CHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCCEEEEEEECCHHH DQFSIGEMEYQHQGTKIKIFNLAVNWRFSSLLHKKLPIDSMSAEMIEINQKTPMLILKNI CCCCCCCEEECCCCCEEEEEEEEEECCHHHHHHHCCCCCCCCCEEEEECCCCCEEEEEEE KLSGYLNQQSIKLNTLQFNYWNQLITSQLELSNSFPHVFSGKIRLNPHSTNKNIFSGGVD EEEEEECCCEEEEEEEEEHHHHHHHHHHHHHCCCCCCEEECEEEECCCCCCCCEEECCEE IGGNRNQIQWGGEFEGPGKITINGSLQQLKQIKQIIKWRDLHWQDNKNHNLKSSQGRIEV CCCCCCEEEECCCCCCCCEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEE SGTIPNLAIDLKSKLGIDQLKNWQMNAAIKGKLPWQWNINATFSQPLDFSSKLDGLYTKF ECCCCCEEEEEHHHCCHHHHCCCEECEEEECCCCEEEECCCEECCCCCCCHHHCCEEEEE ALKMETKNDHHADFLITIAPGHYQMTENNLMPLIQFTGGNIKGSLSQKQFSGQGVLFLDA EEEEECCCCCCCEEEEEECCCCEEECCCCCEEEEEEECCCEECCCCHHHCCCCCEEEEEE YKKVNFNFKFPEFNVYQDIAQQTIDAKLSILFNSLDFLQNASPYLINPKGQFLASIHAKG EEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCEEEEEECCC TLNKPIIESKLALNKGSFNIPALGLNITDMVLAVFSKKDGWEATGSIHSSEKKLTLKGQG CCCCCHHHHHHEECCCCCCCCEECCCHHHHHHHHHCCCCCCCCCCCEECCCCEEEEECCC IFNKELGGTVSIEGSNFPIANNKEFQVNISPQLQVRFTPSLCQITGTIQIPNAHIKPQTF EEECCCCCEEEECCCCCCCCCCCEEEEEECCEEEEEECCCEEEEEEEEECCCCCCCCCCC TNSLVATDDIVFTSKNTQPITPLFNTNMSVRVEMGEEVELTFKGLHAYLAGIVTINQLSQ CCCEEEECEEEEECCCCCCCCCEECCCEEEEEECCCEEEEEHHHHHHHHHHHHEEECCCC GPITANGELTVRKGEYKAYGQDLSIEQGQLIFTGGRIDNPEINLRASKNISNSFGSVSGS CCEECCCEEEEECCCCEECCCCCCCCCCEEEEECCCCCCCEEEEEECCCCCCCCCCCCCC SELFNFNNYNNLNVGNNFNVGVEVAGRLQSPKIQLFSNPPTLSQADILSFLVIGRPANQA CCEEECCCCCCCCCCCCCCEEEEEECCCCCCEEEEECCCCCCCHHHHHEEEEECCCCCCC DKAKGQLLLTAISSMNLGTGTNGTQLLEQLKQKLGFDFNVQTTTNFNQQTNKISESTGVV HHCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHCCCCCEE VGKSLSDRIYLSYNVGLSQTDPNVLTLKYILNKFLSIQVSSSDSGNGVDILYTKSTSSPE EECCCCCEEEEEEECCCCCCCCCEEEHHHHHHHHEEEEEECCCCCCCEEEEEECCCCCCC KAKPDQ CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7610040; 9278503 [H]