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The map label for this gene is 54294639

Identifier: 54294639

GI number: 54294639

Start: 1915118

End: 1915726

Strand: Reverse

Name: 54294639

Synonym: lpl1716

Alternate gene names: NA

Gene position: 1915726-1915118 (Counterclockwise)

Preceding gene: 54294640

Following gene: 54294638

Centisome position: 57.26

GC content: 35.63

Gene sequence:

>609_bases
ATGCTAGAGTTTGCCGAATTTCAGCAAAATGCATTGAAATTAACAGATCAATTAAAGAAACGCAGCATACCATCCTTAGG
CTGTTTTTGTTTTTTTTCAGTGATATTACCCAATACAGAGGCCATTGAAGATACTCATACGATTAGATTGGTTGCTTATA
GCCTGGATAGCGAGAATGACGATGACTTAATCGCTTATCTAAAGGGTGTCACAAGATACTCTGCTGTAACTCCAAAAAAT
ATTAACGAATTCAAAAAAAAGGTACTAACTGGAATTTATTTAATGATGTGGTCACATTATAGCTCTACTGTTTCAAATTT
AATGAATAGCACTTTGGTTGAGCTATTTCAAAGAGATTTGCAAGTGAGCTCCCCGCAAAAGATGAGTGACACTCTGTTTG
ATACCAGTTTAGAGGCTTTAAGTCAATATTGTTCATTTGCCTATCAAAACCGTAATGAACGCATTTATGACAACTTAATT
CGCCGTTTAGGTAAGACGGTGCAAGCAGATATTCATGCCTTACGTCATTCCAGGGAGAAACAGGAAACTTCATTCTATGA
TATTTATAAAGGAATTATGCGTACTTTAGGACTTAATAGCGTGTTTTAG

Upstream 100 bases:

>100_bases
TATTATGTGTAGGTTGATATAAAAATTAAAAGAGTCTTGATCATCAAAGGCGTATTACTCGCTGCGGTTCTTGCGGGTGG
GCCCTTGTGGGAGGGAAACC

Downstream 100 bases:

>100_bases
ACAGGAGACACCATGACTTTTACTCCGCCCGAGTTCAAAATATTAAGTGTAAATACTCGTAACTTAGAGACAATATTCTC
TACCTTGCTAGGCAGGTATA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 202; Mature: 202

Protein sequence:

>202_residues
MLEFAEFQQNALKLTDQLKKRSIPSLGCFCFFSVILPNTEAIEDTHTIRLVAYSLDSENDDDLIAYLKGVTRYSAVTPKN
INEFKKKVLTGIYLMMWSHYSSTVSNLMNSTLVELFQRDLQVSSPQKMSDTLFDTSLEALSQYCSFAYQNRNERIYDNLI
RRLGKTVQADIHALRHSREKQETSFYDIYKGIMRTLGLNSVF

Sequences:

>Translated_202_residues
MLEFAEFQQNALKLTDQLKKRSIPSLGCFCFFSVILPNTEAIEDTHTIRLVAYSLDSENDDDLIAYLKGVTRYSAVTPKN
INEFKKKVLTGIYLMMWSHYSSTVSNLMNSTLVELFQRDLQVSSPQKMSDTLFDTSLEALSQYCSFAYQNRNERIYDNLI
RRLGKTVQADIHALRHSREKQETSFYDIYKGIMRTLGLNSVF
>Mature_202_residues
MLEFAEFQQNALKLTDQLKKRSIPSLGCFCFFSVILPNTEAIEDTHTIRLVAYSLDSENDDDLIAYLKGVTRYSAVTPKN
INEFKKKVLTGIYLMMWSHYSSTVSNLMNSTLVELFQRDLQVSSPQKMSDTLFDTSLEALSQYCSFAYQNRNERIYDNLI
RRLGKTVQADIHALRHSREKQETSFYDIYKGIMRTLGLNSVF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23358; Mature: 23358

Theoretical pI: Translated: 7.50; Mature: 7.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLEFAEFQQNALKLTDQLKKRSIPSLGCFCFFSVILPNTEAIEDTHTIRLVAYSLDSEND
CCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHCCHHHEEEEEEECCCCCC
DDLIAYLKGVTRYSAVTPKNINEFKKKVLTGIYLMMWSHYSSTVSNLMNSTLVELFQRDL
HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QVSSPQKMSDTLFDTSLEALSQYCSFAYQNRNERIYDNLIRRLGKTVQADIHALRHSREK
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QETSFYDIYKGIMRTLGLNSVF
HHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MLEFAEFQQNALKLTDQLKKRSIPSLGCFCFFSVILPNTEAIEDTHTIRLVAYSLDSEND
CCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHCCHHHEEEEEEECCCCCC
DDLIAYLKGVTRYSAVTPKNINEFKKKVLTGIYLMMWSHYSSTVSNLMNSTLVELFQRDL
HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QVSSPQKMSDTLFDTSLEALSQYCSFAYQNRNERIYDNLIRRLGKTVQADIHALRHSREK
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QETSFYDIYKGIMRTLGLNSVF
HHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA