| Definition | Legionella pneumophila str. Lens, complete genome. |
|---|---|
| Accession | NC_006369 |
| Length | 3,345,687 |
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The map label for this gene is glnD [H]
Identifier: 54294608
GI number: 54294608
Start: 1877283
End: 1879868
Strand: Direct
Name: glnD [H]
Synonym: lpl1684
Alternate gene names: 54294608
Gene position: 1877283-1879868 (Clockwise)
Preceding gene: 54294607
Following gene: 54294612
Centisome position: 56.11
GC content: 36.62
Gene sequence:
>2586_bases ATGAAGAACGATAATCGCATCATAAAAAATACGATTAAACAGTTCAAGGAGAAGCTGTGCAGGGACTTTAGCCAAAAAGC TAATATTACCTCCATCACACGCAAGCTTGCTGTATTTATTGATACTATTTTAATTCAATTATTTATTAAAAATAAGCTAC ACTTTGGAGATAATTTTTGTCTCCTGGCCCTTGGAAGCTACGGGCGTAGAGAGCTTCAGCTTCACTCAGATATTGACTTG TTAATATTGCACACTGAAAAAGTAAGCAATATCCAATTACAACGCGCACAAAAATTTATCCAGGATTGTTGGGATGTGGG GCTGGAGGTAAGTCATCAAATTACCACTGTTTCTTCATGTGCCAATTTGGCCAGTCAGGATTTGAGCGTAATTTCTACCA TTATGGATATGTTCTTACTGTGTGGGCATGGTGCCTTAATGGAGGAATTAATATACCAAACACACACCTTGCACATGTGG CCTAGCCATCAATACTTCTTTGCCAAACTTCAGGAACAGCAAAGTCGTTATGCAAAGTATGGAGAAACAGCCTACAACCT TGAACCTAATATTAAAAATGGTCCAGGTGGATTAAGAGACCTGCAAATTTTGCTAAGCATTAGCAAACGCCATTTTAAAA TTAAAAAATTAGCCGAGGGAATCGGCTACGGCTTTATTACTGATAAAGAGTATGAAGAATTAAAATACTGCCAGAACTTT CTTTGGCGCGTTCGATTTGCCTTGCATATGTTAGCAGGAAAGCCTGAGGAGCGCTTGTCATTTGATTATCAGGTTAAATT AGCTCAATTTTTTGGATATCAAGATCAGTCTCATATCTTGGCCATAGAGCAATTTATGAAAGACTACTTTAAAGTCATCA AACGCAATAGAGAGCTGAATGAAATGCTCTTGCAATGGTTCAATGAAACCATAGTCTATCATCAAAAGCAAAAAATTATT CGTCTGGATGATGAATTTCAACTGTCAAACCGATTCATTGAAGTACGCAATAACCGTGTATTTAAACAAAATCCGCAATC TATATTGAAACTATTCTATTGGCTTGTTAAACGCCCTGACATAGAAGGAGTAAGGGCAAGCACAATAAGATTAATTAGAG AATCATTATTTTTAATGGGCAAACGCTTTAGAGAATCAAAAGAAACCGCTAATATATTTGTCAACATATTCAGAACTGGT AATGACCCCTACGATGCATTACAAAGAATGAATAGATATGGTGTTCTAGCGCACTATCTTGATTGTTTTGCTACAGTCAC TGGACAAATGCAGTATGATTTATTCCATGCCTATACTGTTGATCAGCATACACTATTTGTGATCCGTAATATATCTCGCT TTAAAAAGAACGAATATGCTAAACAATTTCCTTTATGCGCCAAAATCATTACTGCTTTAGAGAAGCCCGAAATTTTGTAT CTCGGCGCTTTATTCCACGACATTGCCAAAGGTCGGGGAGGAGATCATTCTGAATTAGGAGCAATTGAGGCACAACAATT TACACAACGCCACTATATGGAGGCAGAAGATAGCAAATTGATTGTTTGGCTTGTTCGCTACCATTTACTCATGTCACAAA CTGCTCAGCGTAAAGATATTTATGATCCTAAAACCATTGAGCAATTCTGCCAACTTCTACCTCATGCAAAGTATTTGGAT TATCTTTATTTACTCACAGTAGCAGATATTTGCGGTACAAATCCTACTCTTTGGAATGCCTGGAAAGATTCATTACTTAA AGAATTATATCATGCAGCAAAAACAAGACTTCATAAACAACAAGAGTTGCTTGATGAAGCAGCTCTGATATCTATTCGTA AACAATACGCTATGGATATATTAATTTCAGATGGGATATCCTCCAGAGTCATACAGGATTTATGGAGCCAATTTAAGGGA AAATATTTTCTTCATGAATCTCCTGAGGTTATAGCCAGACACACCAAGGCCATACTGAACAGCAAACAATTTCCAGTGGT AATAATTATGCCGCATCACAGTCAGGGTGGAACCGAAGTATTTATCTACATGCCACATAAAGATGAGAGATTTACTATCA CCACTTCAGTATTAAGCAATCATCACGTTACTATACAGGAAGCAGCAATTATTACTTGTGATAATCAATTTGATCTGGAT ACTTATATTATTTTAGATGAAAACAATCAGGCTTTTTTGAATGAACAACGTGCCAGAGACATCCAAAAAAGTCTATGTGA TCATCTGGCCAATACAGGACGCCTCCCGGCTGTTTCTCGCAGAAGATTATCCAGAGCATTGACTCATTTTAATGTCAAAA CACAAATTAACTTTATTGATGACAATACGAATCATCAAACCCAACTATTTCTCGTTACCAATGACAGGCCTGGACTTTTG GCGACTATAAGTCGTGTGTTTCTTACACTAAACATTCATTTACATAATGCAAAAATTGCTACGGCTGGTGAGCGGGTAGA AGATATGTTTTACATCTCCAACCAGACAGGTTATTCCCTGAATCATGAGGAAAAAACAATTTTAAAAGAAAAATTAATTT TGGAAATTTCTAAAAGCAAGTATTAA
Upstream 100 bases:
>100_bases GATCATTGGACTGTCGTTACCAAAGATCATAGCCTTTCAGCTCAATGGGAGCACACGCTTTTGGTAACTGATACAGGTGT TGAAATTCTGACTTTGCGTA
Downstream 100 bases:
>100_bases GAAGTATGCCAAGATAAATTACTAGCGAAGCTTTCTGAAAAAATCTGACAGCAATTGAGAACACTCAGCCTGCATAATGC CTTCATCTATTAATACCGAA
Product: hypothetical protein
Products: NA
Alternate protein names: PII uridylyl-transferase; UTase; Uridylyl-removing enzyme [H]
Number of amino acids: Translated: 861; Mature: 861
Protein sequence:
>861_residues MKNDNRIIKNTIKQFKEKLCRDFSQKANITSITRKLAVFIDTILIQLFIKNKLHFGDNFCLLALGSYGRRELQLHSDIDL LILHTEKVSNIQLQRAQKFIQDCWDVGLEVSHQITTVSSCANLASQDLSVISTIMDMFLLCGHGALMEELIYQTHTLHMW PSHQYFFAKLQEQQSRYAKYGETAYNLEPNIKNGPGGLRDLQILLSISKRHFKIKKLAEGIGYGFITDKEYEELKYCQNF LWRVRFALHMLAGKPEERLSFDYQVKLAQFFGYQDQSHILAIEQFMKDYFKVIKRNRELNEMLLQWFNETIVYHQKQKII RLDDEFQLSNRFIEVRNNRVFKQNPQSILKLFYWLVKRPDIEGVRASTIRLIRESLFLMGKRFRESKETANIFVNIFRTG NDPYDALQRMNRYGVLAHYLDCFATVTGQMQYDLFHAYTVDQHTLFVIRNISRFKKNEYAKQFPLCAKIITALEKPEILY LGALFHDIAKGRGGDHSELGAIEAQQFTQRHYMEAEDSKLIVWLVRYHLLMSQTAQRKDIYDPKTIEQFCQLLPHAKYLD YLYLLTVADICGTNPTLWNAWKDSLLKELYHAAKTRLHKQQELLDEAALISIRKQYAMDILISDGISSRVIQDLWSQFKG KYFLHESPEVIARHTKAILNSKQFPVVIIMPHHSQGGTEVFIYMPHKDERFTITTSVLSNHHVTIQEAAIITCDNQFDLD TYIILDENNQAFLNEQRARDIQKSLCDHLANTGRLPAVSRRRLSRALTHFNVKTQINFIDDNTNHQTQLFLVTNDRPGLL ATISRVFLTLNIHLHNAKIATAGERVEDMFYISNQTGYSLNHEEKTILKEKLILEISKSKY
Sequences:
>Translated_861_residues MKNDNRIIKNTIKQFKEKLCRDFSQKANITSITRKLAVFIDTILIQLFIKNKLHFGDNFCLLALGSYGRRELQLHSDIDL LILHTEKVSNIQLQRAQKFIQDCWDVGLEVSHQITTVSSCANLASQDLSVISTIMDMFLLCGHGALMEELIYQTHTLHMW PSHQYFFAKLQEQQSRYAKYGETAYNLEPNIKNGPGGLRDLQILLSISKRHFKIKKLAEGIGYGFITDKEYEELKYCQNF LWRVRFALHMLAGKPEERLSFDYQVKLAQFFGYQDQSHILAIEQFMKDYFKVIKRNRELNEMLLQWFNETIVYHQKQKII RLDDEFQLSNRFIEVRNNRVFKQNPQSILKLFYWLVKRPDIEGVRASTIRLIRESLFLMGKRFRESKETANIFVNIFRTG NDPYDALQRMNRYGVLAHYLDCFATVTGQMQYDLFHAYTVDQHTLFVIRNISRFKKNEYAKQFPLCAKIITALEKPEILY LGALFHDIAKGRGGDHSELGAIEAQQFTQRHYMEAEDSKLIVWLVRYHLLMSQTAQRKDIYDPKTIEQFCQLLPHAKYLD YLYLLTVADICGTNPTLWNAWKDSLLKELYHAAKTRLHKQQELLDEAALISIRKQYAMDILISDGISSRVIQDLWSQFKG KYFLHESPEVIARHTKAILNSKQFPVVIIMPHHSQGGTEVFIYMPHKDERFTITTSVLSNHHVTIQEAAIITCDNQFDLD TYIILDENNQAFLNEQRARDIQKSLCDHLANTGRLPAVSRRRLSRALTHFNVKTQINFIDDNTNHQTQLFLVTNDRPGLL ATISRVFLTLNIHLHNAKIATAGERVEDMFYISNQTGYSLNHEEKTILKEKLILEISKSKY >Mature_861_residues MKNDNRIIKNTIKQFKEKLCRDFSQKANITSITRKLAVFIDTILIQLFIKNKLHFGDNFCLLALGSYGRRELQLHSDIDL LILHTEKVSNIQLQRAQKFIQDCWDVGLEVSHQITTVSSCANLASQDLSVISTIMDMFLLCGHGALMEELIYQTHTLHMW PSHQYFFAKLQEQQSRYAKYGETAYNLEPNIKNGPGGLRDLQILLSISKRHFKIKKLAEGIGYGFITDKEYEELKYCQNF LWRVRFALHMLAGKPEERLSFDYQVKLAQFFGYQDQSHILAIEQFMKDYFKVIKRNRELNEMLLQWFNETIVYHQKQKII RLDDEFQLSNRFIEVRNNRVFKQNPQSILKLFYWLVKRPDIEGVRASTIRLIRESLFLMGKRFRESKETANIFVNIFRTG NDPYDALQRMNRYGVLAHYLDCFATVTGQMQYDLFHAYTVDQHTLFVIRNISRFKKNEYAKQFPLCAKIITALEKPEILY LGALFHDIAKGRGGDHSELGAIEAQQFTQRHYMEAEDSKLIVWLVRYHLLMSQTAQRKDIYDPKTIEQFCQLLPHAKYLD YLYLLTVADICGTNPTLWNAWKDSLLKELYHAAKTRLHKQQELLDEAALISIRKQYAMDILISDGISSRVIQDLWSQFKG KYFLHESPEVIARHTKAILNSKQFPVVIIMPHHSQGGTEVFIYMPHKDERFTITTSVLSNHHVTIQEAAIITCDNQFDLD TYIILDENNQAFLNEQRARDIQKSLCDHLANTGRLPAVSRRRLSRALTHFNVKTQINFIDDNTNHQTQLFLVTNDRPGLL ATISRVFLTLNIHLHNAKIATAGERVEDMFYISNQTGYSLNHEEKTILKEKLILEISKSKY
Specific function: Modifies, by uridylylation or deuridylylation the PII (glnB) regulatory protein [H]
COG id: COG2844
COG function: function code O; UTP:GlnB (protein PII) uridylyltransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glnD family [H]
Homologues:
Organism=Escherichia coli, GI1786363, Length=848, Percent_Identity=37.5, Blast_Score=596, Evalue=1e-171,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005105 - InterPro: IPR010043 - InterPro: IPR003607 - InterPro: IPR013546 [H]
Pfam domain/function: PF03445 DUF294; PF08335 GlnD_UR_UTase [H]
EC number: =2.7.7.59 [H]
Molecular weight: Translated: 100672; Mature: 100672
Theoretical pI: Translated: 8.98; Mature: 8.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNDNRIIKNTIKQFKEKLCRDFSQKANITSITRKLAVFIDTILIQLFIKNKLHFGDNFC CCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEE LLALGSYGRRELQLHSDIDLLILHTEKVSNIQLQRAQKFIQDCWDVGLEVSHQITTVSSC EEEECCCCCCEEEEECCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH ANLASQDLSVISTIMDMFLLCGHGALMEELIYQTHTLHMWPSHQYFFAKLQEQQSRYAKY HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHHHC GETAYNLEPNIKNGPGGLRDLQILLSISKRHFKIKKLAEGIGYGFITDKEYEELKYCQNF CCCEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH LWRVRFALHMLAGKPEERLSFDYQVKLAQFFGYQDQSHILAIEQFMKDYFKVIKRNRELN HHHHHHHHHHHCCCCHHHCCCHHEEHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCHHH EMLLQWFNETIVYHQKQKIIRLDDEFQLSNRFIEVRNNRVFKQNPQSILKLFYWLVKRPD HHHHHHHHHHHHEECCCCEEECCCHHHHHHHHHEECCCCCCCCCHHHHHHHHHHHHCCCC IEGVRASTIRLIRESLFLMGKRFRESKETANIFVNIFRTGNDPYDALQRMNRYGVLAHYL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCCCHHHHHHHHHHHHHHHHHH DCFATVTGQMQYDLFHAYTVDQHTLFVIRNISRFKKNEYAKQFPLCAKIITALEKPEILY HHHHHHHCCEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCEEE LGALFHDIAKGRGGDHSELGAIEAQQFTQRHYMEAEDSKLIVWLVRYHLLMSQTAQRKDI HHHHHHHHHCCCCCCCHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCC YDPKTIEQFCQLLPHAKYLDYLYLLTVADICGTNPTLWNAWKDSLLKELYHAAKTRLHKQ CCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH QELLDEAALISIRKQYAMDILISDGISSRVIQDLWSQFKGKYFLHESPEVIARHTKAILN HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHC SKQFPVVIIMPHHSQGGTEVFIYMPHKDERFTITTSVLSNHHVTIQEAAIITCDNQFDLD CCCCCEEEEEECCCCCCCEEEEEECCCCCCEEEEEHHHCCCCEEEEEEEEEEECCCCCCE TYIILDENNQAFLNEQRARDIQKSLCDHLANTGRLPAVSRRRLSRALTHFNVKTQINFID EEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCEEEEEEEEEE DNTNHQTQLFLVTNDRPGLLATISRVFLTLNIHLHNAKIATAGERVEDMFYISNQTGYSL CCCCCEEEEEEEECCCCCHHHHHHHHHEEEEEEEECCEEECCHHHHHHEEEEECCCCCCC NHEEKTILKEKLILEISKSKY CCHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MKNDNRIIKNTIKQFKEKLCRDFSQKANITSITRKLAVFIDTILIQLFIKNKLHFGDNFC CCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEE LLALGSYGRRELQLHSDIDLLILHTEKVSNIQLQRAQKFIQDCWDVGLEVSHQITTVSSC EEEECCCCCCEEEEECCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH ANLASQDLSVISTIMDMFLLCGHGALMEELIYQTHTLHMWPSHQYFFAKLQEQQSRYAKY HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHHHC GETAYNLEPNIKNGPGGLRDLQILLSISKRHFKIKKLAEGIGYGFITDKEYEELKYCQNF CCCEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH LWRVRFALHMLAGKPEERLSFDYQVKLAQFFGYQDQSHILAIEQFMKDYFKVIKRNRELN HHHHHHHHHHHCCCCHHHCCCHHEEHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCHHH EMLLQWFNETIVYHQKQKIIRLDDEFQLSNRFIEVRNNRVFKQNPQSILKLFYWLVKRPD HHHHHHHHHHHHEECCCCEEECCCHHHHHHHHHEECCCCCCCCCHHHHHHHHHHHHCCCC IEGVRASTIRLIRESLFLMGKRFRESKETANIFVNIFRTGNDPYDALQRMNRYGVLAHYL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCCCHHHHHHHHHHHHHHHHHH DCFATVTGQMQYDLFHAYTVDQHTLFVIRNISRFKKNEYAKQFPLCAKIITALEKPEILY HHHHHHHCCEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCEEE LGALFHDIAKGRGGDHSELGAIEAQQFTQRHYMEAEDSKLIVWLVRYHLLMSQTAQRKDI HHHHHHHHHCCCCCCCHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCC YDPKTIEQFCQLLPHAKYLDYLYLLTVADICGTNPTLWNAWKDSLLKELYHAAKTRLHKQ CCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH QELLDEAALISIRKQYAMDILISDGISSRVIQDLWSQFKGKYFLHESPEVIARHTKAILN HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHC SKQFPVVIIMPHHSQGGTEVFIYMPHKDERFTITTSVLSNHHVTIQEAAIITCDNQFDLD CCCCCEEEEEECCCCCCCEEEEEECCCCCCEEEEEHHHCCCCEEEEEEEEEEECCCCCCE TYIILDENNQAFLNEQRARDIQKSLCDHLANTGRLPAVSRRRLSRALTHFNVKTQINFID EEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCEEEEEEEEEE DNTNHQTQLFLVTNDRPGLLATISRVFLTLNIHLHNAKIATAGERVEDMFYISNQTGYSL CCCCCEEEEEEEECCCCCHHHHHHHHHEEEEEEEECCEEECCHHHHHHEEEEECCCCCCC NHEEKTILKEKLILEISKSKY CCHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA