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The map label for this gene is 54294604

Identifier: 54294604

GI number: 54294604

Start: 1872034

End: 1873806

Strand: Direct

Name: 54294604

Synonym: lpl1680

Alternate gene names: NA

Gene position: 1872034-1873806 (Clockwise)

Preceding gene: 54294602

Following gene: 54294605

Centisome position: 55.95

GC content: 35.25

Gene sequence:

>1773_bases
ATGGATAAAATCATGCCAAATCAGTACGTTCAAGAAATCATTGAGAATTGGGTTGCCACCCTTCCTGGTGATCTGATAAA
TAATTTAGGCACTCTTCGTTCTGATAATTTAGATAATAACATGAAAGCACTAGAGGAAACGCTTAATCCAATATTGGCCA
ATAGTGGATATAAAGCTCAAGTCAAGGCTTTATCTCTAGGGTTTAATAAAATAATTCGTCTTAAAATAGAAAACACCGCT
GAGCCTATTGGTTTAGAAGAGATCAAAAATGAGGAAATAGAAATAGAAGAACCCTTCAACTATTGTCTCTCAATCGAAAA
TTTGGAGATGTATATAGAACCAGATGTCAGAACAGAATTAGCCAATAAAGATAATGAGGCGGCTGCGCATCTTGCTCCAG
TTTATGCTTCTAATCAAACAGATGCTTATCGAGCCTCTCTCTTGCCATTTTATAAAGATGGGACATTAGATGATAAAATA
AGTTTTGCAACATATTTTGATGCCGCTTCAGAGGAATCATTGGATCTGGATCGGTATATAGCTTTATGTTCATTAAAAAA
CGTACAAAATCAGTATTTTAAACAGCATAGTAATGTCGCTTTCACACCTGAAGTTATGTACGCAGCAGGCAAATATAGAG
AGTTTAGTTACGAAAGTATCAATACTGCTATGCATCTATATGAACTTGCCGAAAAAAAAACTGAAATAAATAAGAAGCTT
GAAGGATCCAATTCTCCAGGAAAAAGAATAATGTCCGCTTTAAGGGGACGGAGAGCCAGTGAAGAGTTCAATGTTGAAGA
AGAAAAAAAACATATCAATAATTTTTTCGATTCTTTAATAGAATCGGTTCAGAACGCGTTGAGAGATTATCCAGAAAAAG
ATGCACAAATAGAAGATTTAATAAATGATTTGCAAGCCCATTTACCAAATCAAGAAAGCGGTAATTTTTTAAGAAATACA
AGAGCATCTCTAGATTATTTCAATAATGCTATTTCCAAATTTATAGATAATATTCAATTTGAGGCTGATCTGGGAATAGT
TATGGAAAATCAACAAAAAGTACTATTACCTGTGGCAATAGATGTTATGAGATGCGCTGATGACTTTGAAAGAAATGATA
TCCAGTATTGGGACTGGAAGGCGCCTAATATCTTTATGACTGAAGGACAGTTGGTTTTTACAGACACTAAAACGTTAACA
CAAAGACAGAATGATAAAGTTTCCTTTGGTTTAGGGCATATGACTTATAGAGCCCCTGACAGTGAGATGTATCAACAGAC
AGGTGAGTCAGTAGATATTGAATGGGCTAAAGGACTTGCTAAATTTCAAATAGGTTTGATGCTTTATGAGATGACACTTG
GATGGACTGGTATGACTGAATCTTTAAATACCCCTCATCTGCTTAATATCGGTATAATTAAAGAGCTGGATTTTGATTAT
CCTTGCTTTAAAACCAACACGGGTCAGATATTGGAAAAACAGATTAAAGCCCTAACTGATCTGGATCCTGCTAAACGACC
AGATTTTAGCAAAGTACAAGAAGCATTAATAACCTTTACGACTGAAAATGAAATGATAAGGCAGCATCAAGAAGACATCT
CACACCTTTTCGAGCCCTCTGATCTTGAGACGCTCTCCTGTCCAATACAAACTAATCACCAAGCTCCACTAACTATTAAA
GAGAAATTTAAAACTGTTAAAGTGGAGGAGGAAACCATTACGAATGAAGAAAAAGCAACTCCAGTTGAAAAATCTATAAT
AAGGCCAAAGTAG

Upstream 100 bases:

>100_bases
TCACTAACTCCATAAAAATGCCACATTCATAGAGTTGTGACCAAAATTTCTATCTAAATTTTAAATTTCTGAATGTAGTC
TATACTAAAATAAAAACGAA

Downstream 100 bases:

>100_bases
TAGAATATCCTAAAATTAATCTAGAGATATTTCTCATCATAAAATTGAACGGAGTAACTTCAATGAATAGTAAAGAAAGA
AAATACTGGTATAAAATTGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 590; Mature: 590

Protein sequence:

>590_residues
MDKIMPNQYVQEIIENWVATLPGDLINNLGTLRSDNLDNNMKALEETLNPILANSGYKAQVKALSLGFNKIIRLKIENTA
EPIGLEEIKNEEIEIEEPFNYCLSIENLEMYIEPDVRTELANKDNEAAAHLAPVYASNQTDAYRASLLPFYKDGTLDDKI
SFATYFDAASEESLDLDRYIALCSLKNVQNQYFKQHSNVAFTPEVMYAAGKYREFSYESINTAMHLYELAEKKTEINKKL
EGSNSPGKRIMSALRGRRASEEFNVEEEKKHINNFFDSLIESVQNALRDYPEKDAQIEDLINDLQAHLPNQESGNFLRNT
RASLDYFNNAISKFIDNIQFEADLGIVMENQQKVLLPVAIDVMRCADDFERNDIQYWDWKAPNIFMTEGQLVFTDTKTLT
QRQNDKVSFGLGHMTYRAPDSEMYQQTGESVDIEWAKGLAKFQIGLMLYEMTLGWTGMTESLNTPHLLNIGIIKELDFDY
PCFKTNTGQILEKQIKALTDLDPAKRPDFSKVQEALITFTTENEMIRQHQEDISHLFEPSDLETLSCPIQTNHQAPLTIK
EKFKTVKVEEETITNEEKATPVEKSIIRPK

Sequences:

>Translated_590_residues
MDKIMPNQYVQEIIENWVATLPGDLINNLGTLRSDNLDNNMKALEETLNPILANSGYKAQVKALSLGFNKIIRLKIENTA
EPIGLEEIKNEEIEIEEPFNYCLSIENLEMYIEPDVRTELANKDNEAAAHLAPVYASNQTDAYRASLLPFYKDGTLDDKI
SFATYFDAASEESLDLDRYIALCSLKNVQNQYFKQHSNVAFTPEVMYAAGKYREFSYESINTAMHLYELAEKKTEINKKL
EGSNSPGKRIMSALRGRRASEEFNVEEEKKHINNFFDSLIESVQNALRDYPEKDAQIEDLINDLQAHLPNQESGNFLRNT
RASLDYFNNAISKFIDNIQFEADLGIVMENQQKVLLPVAIDVMRCADDFERNDIQYWDWKAPNIFMTEGQLVFTDTKTLT
QRQNDKVSFGLGHMTYRAPDSEMYQQTGESVDIEWAKGLAKFQIGLMLYEMTLGWTGMTESLNTPHLLNIGIIKELDFDY
PCFKTNTGQILEKQIKALTDLDPAKRPDFSKVQEALITFTTENEMIRQHQEDISHLFEPSDLETLSCPIQTNHQAPLTIK
EKFKTVKVEEETITNEEKATPVEKSIIRPK
>Mature_590_residues
MDKIMPNQYVQEIIENWVATLPGDLINNLGTLRSDNLDNNMKALEETLNPILANSGYKAQVKALSLGFNKIIRLKIENTA
EPIGLEEIKNEEIEIEEPFNYCLSIENLEMYIEPDVRTELANKDNEAAAHLAPVYASNQTDAYRASLLPFYKDGTLDDKI
SFATYFDAASEESLDLDRYIALCSLKNVQNQYFKQHSNVAFTPEVMYAAGKYREFSYESINTAMHLYELAEKKTEINKKL
EGSNSPGKRIMSALRGRRASEEFNVEEEKKHINNFFDSLIESVQNALRDYPEKDAQIEDLINDLQAHLPNQESGNFLRNT
RASLDYFNNAISKFIDNIQFEADLGIVMENQQKVLLPVAIDVMRCADDFERNDIQYWDWKAPNIFMTEGQLVFTDTKTLT
QRQNDKVSFGLGHMTYRAPDSEMYQQTGESVDIEWAKGLAKFQIGLMLYEMTLGWTGMTESLNTPHLLNIGIIKELDFDY
PCFKTNTGQILEKQIKALTDLDPAKRPDFSKVQEALITFTTENEMIRQHQEDISHLFEPSDLETLSCPIQTNHQAPLTIK
EKFKTVKVEEETITNEEKATPVEKSIIRPK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 67603; Mature: 67603

Theoretical pI: Translated: 4.47; Mature: 4.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKIMPNQYVQEIIENWVATLPGDLINNLGTLRSDNLDNNMKALEETLNPILANSGYKAQ
CCCCCCHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEE
VKALSLGFNKIIRLKIENTAEPIGLEEIKNEEIEIEEPFNYCLSIENLEMYIEPDVRTEL
HHHHHCCCCEEEEEEECCCCCCCCHHHHCCCCEEEECCHHHHEEEECEEEEECCCHHHHH
ANKDNEAAAHLAPVYASNQTDAYRASLLPFYKDGTLDDKISFATYFDAASEESLDLDRYI
CCCCCCHHHHEEHEEECCCCCHHHHHCCCCCCCCCCCCCEEHHHHCCCCCCCCCCHHHHH
ALCSLKNVQNQYFKQHSNVAFTPEVMYAAGKYREFSYESINTAMHLYELAEKKTEINKKL
HHHHHHHHHHHHHHHCCCCEECHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
EGSNSPGKRIMSALRGRRASEEFNVEEEKKHINNFFDSLIESVQNALRDYPEKDAQIEDL
CCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH
INDLQAHLPNQESGNFLRNTRASLDYFNNAISKFIDNIQFEADLGIVMENQQKVLLPVAI
HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEECCCCEEEECCCEEEHHHHH
DVMRCADDFERNDIQYWDWKAPNIFMTEGQLVFTDTKTLTQRQNDKVSFGLGHMTYRAPD
HHHHHHHHHCCCCCCEEECCCCEEEEECCEEEEECCHHHHHCCCCCEEEECCCEEEECCC
SEMYQQTGESVDIEWAKGLAKFQIGLMLYEMTLGWTGMTESLNTPHLLNIGIIKELDFDY
HHHHHHCCCCEEHHHHHHHHHHHHHHHHEEHHHCCCCCCCCCCCCEEEEECEEEECCCCC
PCFKTNTGQILEKQIKALTDLDPAKRPDFSKVQEALITFTTENEMIRQHQEDISHLFEPS
CCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHEECCCHHHHHHHHHHHHHCCCCC
DLETLSCPIQTNHQAPLTIKEKFKTVKVEEETITNEEKATPVEKSIIRPK
CCCEEECCCCCCCCCCEEHHHCCCEEEECHHHHCCCHHCCCHHHHCCCCC
>Mature Secondary Structure
MDKIMPNQYVQEIIENWVATLPGDLINNLGTLRSDNLDNNMKALEETLNPILANSGYKAQ
CCCCCCHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEE
VKALSLGFNKIIRLKIENTAEPIGLEEIKNEEIEIEEPFNYCLSIENLEMYIEPDVRTEL
HHHHHCCCCEEEEEEECCCCCCCCHHHHCCCCEEEECCHHHHEEEECEEEEECCCHHHHH
ANKDNEAAAHLAPVYASNQTDAYRASLLPFYKDGTLDDKISFATYFDAASEESLDLDRYI
CCCCCCHHHHEEHEEECCCCCHHHHHCCCCCCCCCCCCCEEHHHHCCCCCCCCCCHHHHH
ALCSLKNVQNQYFKQHSNVAFTPEVMYAAGKYREFSYESINTAMHLYELAEKKTEINKKL
HHHHHHHHHHHHHHHCCCCEECHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
EGSNSPGKRIMSALRGRRASEEFNVEEEKKHINNFFDSLIESVQNALRDYPEKDAQIEDL
CCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH
INDLQAHLPNQESGNFLRNTRASLDYFNNAISKFIDNIQFEADLGIVMENQQKVLLPVAI
HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEECCCCEEEECCCEEEHHHHH
DVMRCADDFERNDIQYWDWKAPNIFMTEGQLVFTDTKTLTQRQNDKVSFGLGHMTYRAPD
HHHHHHHHHCCCCCCEEECCCCEEEEECCEEEEECCHHHHHCCCCCEEEECCCEEEECCC
SEMYQQTGESVDIEWAKGLAKFQIGLMLYEMTLGWTGMTESLNTPHLLNIGIIKELDFDY
HHHHHHCCCCEEHHHHHHHHHHHHHHHHEEHHHCCCCCCCCCCCCEEEEECEEEECCCCC
PCFKTNTGQILEKQIKALTDLDPAKRPDFSKVQEALITFTTENEMIRQHQEDISHLFEPS
CCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHEECCCHHHHHHHHHHHHHCCCCC
DLETLSCPIQTNHQAPLTIKEKFKTVKVEEETITNEEKATPVEKSIIRPK
CCCEEECCCCCCCCCCEEHHHCCCEEEECHHHHCCCHHCCCHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA