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The map label for this gene is 54294602

Identifier: 54294602

GI number: 54294602

Start: 1870005

End: 1870523

Strand: Direct

Name: 54294602

Synonym: lpl1678

Alternate gene names: NA

Gene position: 1870005-1870523 (Clockwise)

Preceding gene: 54294599

Following gene: 54294604

Centisome position: 55.89

GC content: 34.1

Gene sequence:

>519_bases
ATGTTTTTCAAAAAAATGGCTTTAAATGAAAAAGATAAGATTATATTATTATTAAAACAATTTTATCTGACGTACTTACA
GCAGCTAAACTATACGGAGCTCGATCGACTTTCATTAGTTGTTGATGAGAGCGATTATAAGAATTTACAAGTCAATTCAA
AAGAAGATTTTGCCCGAGACATTATTCGTCGAATAGTTAATTATCATCAACTCTTCAAACAGAATGACTTGATAGGCTAT
TTGCTAAAAACCGATGGCTCAACCAATGAAAATCAAAGAGTGCAGCATTACGATATTCAAATTGAAATCTATATTAGTGA
CATTAAACCTCTATTCGCTCTGATAGAGAAAGGAATTACTAAGAATGCAATACCTGATAGACCAGTTAACAATATTGGTG
GAAAATTGTTCTGTCGCCTTTGCGAGACTGGCCTGAATGTGTTGCACGCCCAGTTCTATAGTGATCAAGTAGCTTTTGAC
GGTGATAAATTTCCACAACTTTCAACATTCGCTCCCTAA

Upstream 100 bases:

>100_bases
TGCTAATAAAAAACAAGGCTTCACCTATCAAAAAATAACAGTTGATCATATTGAGCACAATTGTTGATAATTATACACCC
CAAATGAACTGGTTTAGATC

Downstream 100 bases:

>100_bases
TAAGGGCGGTACACTTTGCGCCGGTTGACTTTTGCTTGGATTAAAGTAATGGATAAGGGAAAATTTGTGCGATCACAGGG
ACAATAATTAAACAATGCTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 172; Mature: 172

Protein sequence:

>172_residues
MFFKKMALNEKDKIILLLKQFYLTYLQQLNYTELDRLSLVVDESDYKNLQVNSKEDFARDIIRRIVNYHQLFKQNDLIGY
LLKTDGSTNENQRVQHYDIQIEIYISDIKPLFALIEKGITKNAIPDRPVNNIGGKLFCRLCETGLNVLHAQFYSDQVAFD
GDKFPQLSTFAP

Sequences:

>Translated_172_residues
MFFKKMALNEKDKIILLLKQFYLTYLQQLNYTELDRLSLVVDESDYKNLQVNSKEDFARDIIRRIVNYHQLFKQNDLIGY
LLKTDGSTNENQRVQHYDIQIEIYISDIKPLFALIEKGITKNAIPDRPVNNIGGKLFCRLCETGLNVLHAQFYSDQVAFD
GDKFPQLSTFAP
>Mature_172_residues
MFFKKMALNEKDKIILLLKQFYLTYLQQLNYTELDRLSLVVDESDYKNLQVNSKEDFARDIIRRIVNYHQLFKQNDLIGY
LLKTDGSTNENQRVQHYDIQIEIYISDIKPLFALIEKGITKNAIPDRPVNNIGGKLFCRLCETGLNVLHAQFYSDQVAFD
GDKFPQLSTFAP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20104; Mature: 20104

Theoretical pI: Translated: 6.78; Mature: 6.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFFKKMALNEKDKIILLLKQFYLTYLQQLNYTELDRLSLVVDESDYKNLQVNSKEDFARD
CCCHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHEEEEECCCCCCCEECCCHHHHHHH
IIRRIVNYHQLFKQNDLIGYLLKTDGSTNENQRVQHYDIQIEIYISDIKPLFALIEKGIT
HHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCEEEEEEEEEEEECCHHHHHHHHHCCCC
KNAIPDRPVNNIGGKLFCRLCETGLNVLHAQFYSDQVAFDGDKFPQLSTFAP
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCC
>Mature Secondary Structure
MFFKKMALNEKDKIILLLKQFYLTYLQQLNYTELDRLSLVVDESDYKNLQVNSKEDFARD
CCCHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHEEEEECCCCCCCEECCCHHHHHHH
IIRRIVNYHQLFKQNDLIGYLLKTDGSTNENQRVQHYDIQIEIYISDIKPLFALIEKGIT
HHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCEEEEEEEEEEEECCHHHHHHHHHCCCC
KNAIPDRPVNNIGGKLFCRLCETGLNVLHAQFYSDQVAFDGDKFPQLSTFAP
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA