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The map label for this gene is 54294560

Identifier: 54294560

GI number: 54294560

Start: 1821593

End: 1823710

Strand: Direct

Name: 54294560

Synonym: lpl1636

Alternate gene names: NA

Gene position: 1821593-1823710 (Clockwise)

Preceding gene: 54294559

Following gene: 54294573

Centisome position: 54.45

GC content: 35.17

Gene sequence:

>2118_bases
ATGGGATATCATTTTTTAACAGAAGGAAATGGGATTATTGCATGTTATGACATGTACCCAACCCAGTTTCATTCTATTAA
GGACATGATTAATTATTTGCCTGTCTTAAAGCAGATGGGGTTTAATGCCTTATGGATTAATCCCATGCAAATGCCCGGTG
ACATTAGCGGTTTTTTTAAAACGGATAAAAATAATGGTGTAAAAACAGGAAATGAGGTCACTAGAAGCTTATATGCCATG
AGTCACCCATTATTATTTAATCCTCAATTCAGTTTGGGCTCTCCTGAAGACCCCATGGAGACAACCCAACGATTAAACTC
AGAAGCTTTACAGCTATTCACTCAAAATGCAAGGAACCTCGGAATAGTTCCAATGTTTGATCTGGTTTTAAATCATGTCG
CCATTGATTCTCCCTTGTGTCAGGATAAGCCTCATTGGTTCAAAGGAGTTCATGAAGACTTCAAAGATGTTCGCGGCTTT
AATTACGATGATGAAAGCATAAGAAAAGAAATAATAACCGAATTTTGGCAACCTTATATCAAACGTTACATGATCGAGTA
CGGTTTTGATGGTGTTCGAGTCGATGCTGTAGGTTATGTATATCCTGCAGTAAGAAGTGAAATATATGCCTATATTCACT
CTCTTGCTGCTGAAAATGGTAAACCCAAGCCGGTTATCCTTGATGAAGCTTTATTTAGTAAACGACCACTTGCGGATGAA
GTAAATTATTTGAAATTACCTGGTATAGGCCCAACTCACATCACTACAGAAGCTTATAATGTTGAATTTGATCTTGCCAG
CGCTGATCTGCCTTATGAAATAACATTGGAAGAGCAGTTAAAGGCGAGTGTAGTCTTCCAACAAAAAGATGGGACATGGC
GTGAAAATACGAAGGGAGGCTGCATTAATTTTTGTGGGAATCATGACTATCGTTCATTGGCGATGACTATTTTATTTCAA
ATGGCCAAAAAAAGACTGAAATCTGACGCTTTTTATAATGACTTAATGTCTTCCTATCAAGACTTGTACTTTAAGTTTAA
CGCCGAGCAAGAAAAACCACATGAACTTAAAGAGCCTTTGAAAACAACCTTACTTTACTCTTATGTTGATCAAATTAAAA
AGGAGTTGGAAGATAATCAAGATGAAACAGCACAAGAATTTAAAACTCTGGTATTAGAAAAACTGGCTTTATCCGCTCTT
ACAGCCAGTGGCGGATGGTTTTTATTATCTGGTGATGAAACATGCGATATCACCGCAAAAACAGTATTTCAGAGAAAAGG
CGCCGTTGATAAATCTTATTACCCACAACGTGAACATCGTATTTTTAGTGAAAAACCAGTTATTGCTCACAAAATTTTAG
AAAAAATGGCAGAAGAGAATTTCTTCATAGAAAACTCGGAAAATAAGTGGATGCAGGAACTTTACCGAAGTTTATCAAGT
TTTCCTGAAATGCAAAAACGTCTTTTAGTATCTCATATTGATAATATTAAATACCAAATAAATGCCGGCATAGATCATGT
ACAAGAAAAATTTTCCAGGCTACTTGCCAGTGAAAGTTTAAATATAGGTTTCACATCCCAAGATTTTTCAGAGAATCCAA
GAACCCACGAAAATGGATGGCTTGGATTACAGAATAATTTTCTATTTATCAAACAATTAAATACATTATTAAAAACACTA
CCTGCATCACTACCCGGATTCTCCAGTGAATTGGTCCGACTTACTGGAAAACCGCATCTCATTATTGTCGTAAGAAAAAA
TGGTAATGAATTAAGTGCTCCAATTGATATTGTTGTTGTTAACCTTCAACAGGAAAAACGACAAACATTAACTAAAGAAG
ATTTTCAATTAATTGCCAAAAGCTATTGCAATCAATATTTTTCTAAAAATAACCCGAGTGTTTGCGATAGCTTACGTGAA
AAATTATATTCACATGTTTTACAATCCGCTGCAAATAATCGAGTTCATACAGACACCAGTATTAAACTGAATGGAATCCA
TTTATTTGAGTTTAAAGAAACTTTGTTAAACACTTTTTTTACAATTGAAAAAGAAAAAAACTACTCTCATGGAAATGAAG
ACCATACTGCTCTGTCTGGAAATACAATCCAGTATTAG

Upstream 100 bases:

>100_bases
TATAATAGCAAGCGATTCGACTGATAAAAGTGGAGTTGTAACCAACAATTCGATTTTTCTCAGTTTTGTAGTTTAATAAT
TTTCTACGGTGATCGATTCA

Downstream 100 bases:

>100_bases
AGACCTTTCGATGCAATCAGGTTAATTGCAGCTACCAAAGCCATTCCTTCCAACTGCTGCACCCTTGCTTTTAACGTTTG
AGCTGTATCACCTTCTAAGA

Product: hypothetical protein

Products: NA

Alternate protein names: Alpha Amylase Catalytic Subunit; Alpha Amylase Catalytic Domain Subfamily

Number of amino acids: Translated: 705; Mature: 704

Protein sequence:

>705_residues
MGYHFLTEGNGIIACYDMYPTQFHSIKDMINYLPVLKQMGFNALWINPMQMPGDISGFFKTDKNNGVKTGNEVTRSLYAM
SHPLLFNPQFSLGSPEDPMETTQRLNSEALQLFTQNARNLGIVPMFDLVLNHVAIDSPLCQDKPHWFKGVHEDFKDVRGF
NYDDESIRKEIITEFWQPYIKRYMIEYGFDGVRVDAVGYVYPAVRSEIYAYIHSLAAENGKPKPVILDEALFSKRPLADE
VNYLKLPGIGPTHITTEAYNVEFDLASADLPYEITLEEQLKASVVFQQKDGTWRENTKGGCINFCGNHDYRSLAMTILFQ
MAKKRLKSDAFYNDLMSSYQDLYFKFNAEQEKPHELKEPLKTTLLYSYVDQIKKELEDNQDETAQEFKTLVLEKLALSAL
TASGGWFLLSGDETCDITAKTVFQRKGAVDKSYYPQREHRIFSEKPVIAHKILEKMAEENFFIENSENKWMQELYRSLSS
FPEMQKRLLVSHIDNIKYQINAGIDHVQEKFSRLLASESLNIGFTSQDFSENPRTHENGWLGLQNNFLFIKQLNTLLKTL
PASLPGFSSELVRLTGKPHLIIVVRKNGNELSAPIDIVVVNLQQEKRQTLTKEDFQLIAKSYCNQYFSKNNPSVCDSLRE
KLYSHVLQSAANNRVHTDTSIKLNGIHLFEFKETLLNTFFTIEKEKNYSHGNEDHTALSGNTIQY

Sequences:

>Translated_705_residues
MGYHFLTEGNGIIACYDMYPTQFHSIKDMINYLPVLKQMGFNALWINPMQMPGDISGFFKTDKNNGVKTGNEVTRSLYAM
SHPLLFNPQFSLGSPEDPMETTQRLNSEALQLFTQNARNLGIVPMFDLVLNHVAIDSPLCQDKPHWFKGVHEDFKDVRGF
NYDDESIRKEIITEFWQPYIKRYMIEYGFDGVRVDAVGYVYPAVRSEIYAYIHSLAAENGKPKPVILDEALFSKRPLADE
VNYLKLPGIGPTHITTEAYNVEFDLASADLPYEITLEEQLKASVVFQQKDGTWRENTKGGCINFCGNHDYRSLAMTILFQ
MAKKRLKSDAFYNDLMSSYQDLYFKFNAEQEKPHELKEPLKTTLLYSYVDQIKKELEDNQDETAQEFKTLVLEKLALSAL
TASGGWFLLSGDETCDITAKTVFQRKGAVDKSYYPQREHRIFSEKPVIAHKILEKMAEENFFIENSENKWMQELYRSLSS
FPEMQKRLLVSHIDNIKYQINAGIDHVQEKFSRLLASESLNIGFTSQDFSENPRTHENGWLGLQNNFLFIKQLNTLLKTL
PASLPGFSSELVRLTGKPHLIIVVRKNGNELSAPIDIVVVNLQQEKRQTLTKEDFQLIAKSYCNQYFSKNNPSVCDSLRE
KLYSHVLQSAANNRVHTDTSIKLNGIHLFEFKETLLNTFFTIEKEKNYSHGNEDHTALSGNTIQY
>Mature_704_residues
GYHFLTEGNGIIACYDMYPTQFHSIKDMINYLPVLKQMGFNALWINPMQMPGDISGFFKTDKNNGVKTGNEVTRSLYAMS
HPLLFNPQFSLGSPEDPMETTQRLNSEALQLFTQNARNLGIVPMFDLVLNHVAIDSPLCQDKPHWFKGVHEDFKDVRGFN
YDDESIRKEIITEFWQPYIKRYMIEYGFDGVRVDAVGYVYPAVRSEIYAYIHSLAAENGKPKPVILDEALFSKRPLADEV
NYLKLPGIGPTHITTEAYNVEFDLASADLPYEITLEEQLKASVVFQQKDGTWRENTKGGCINFCGNHDYRSLAMTILFQM
AKKRLKSDAFYNDLMSSYQDLYFKFNAEQEKPHELKEPLKTTLLYSYVDQIKKELEDNQDETAQEFKTLVLEKLALSALT
ASGGWFLLSGDETCDITAKTVFQRKGAVDKSYYPQREHRIFSEKPVIAHKILEKMAEENFFIENSENKWMQELYRSLSSF
PEMQKRLLVSHIDNIKYQINAGIDHVQEKFSRLLASESLNIGFTSQDFSENPRTHENGWLGLQNNFLFIKQLNTLLKTLP
ASLPGFSSELVRLTGKPHLIIVVRKNGNELSAPIDIVVVNLQQEKRQTLTKEDFQLIAKSYCNQYFSKNNPSVCDSLREK
LYSHVLQSAANNRVHTDTSIKLNGIHLFEFKETLLNTFFTIEKEKNYSHGNEDHTALSGNTIQY

Specific function: Unknown

COG id: COG0366

COG function: function code G; Glycosidases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 81024; Mature: 80893

Theoretical pI: Translated: 6.16; Mature: 6.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGYHFLTEGNGIIACYDMYPTQFHSIKDMINYLPVLKQMGFNALWINPMQMPGDISGFFK
CCCEEEECCCCEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCEE
TDKNNGVKTGNEVTRSLYAMSHPLLFNPQFSLGSPEDPMETTQRLNSEALQLFTQNARNL
ECCCCCCCCHHHHHHHHHHHCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCC
GIVPMFDLVLNHVAIDSPLCQDKPHWFKGVHEDFKDVRGFNYDDESIRKEIITEFWQPYI
CCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
KRYMIEYGFDGVRVDAVGYVYPAVRSEIYAYIHSLAAENGKPKPVILDEALFSKRPLADE
HHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECHHHHCCCCCCCC
VNYLKLPGIGPTHITTEAYNVEFDLASADLPYEITLEEQLKASVVFQQKDGTWRENTKGG
CCEEECCCCCCCCEEEEEEEEEEEEECCCCCEEEEHHHHHCEEEEEEECCCCCCCCCCCC
CINFCGNHDYRSLAMTILFQMAKKRLKSDAFYNDLMSSYQDLYFKFNAEQEKPHELKEPL
EEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCHHHHHHH
KTTLLYSYVDQIKKELEDNQDETAQEFKTLVLEKLALSALTASGGWFLLSGDETCDITAK
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHH
TVFQRKGAVDKSYYPQREHRIFSEKPVIAHKILEKMAEENFFIENSENKWMQELYRSLSS
HHHHHCCCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHCCEEEECCCCHHHHHHHHHHHH
FPEMQKRLLVSHIDNIKYQINAGIDHVQEKFSRLLASESLNIGFTSQDFSENPRTHENGW
HHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCE
LGLQNNFLFIKQLNTLLKTLPASLPGFSSELVRLTGKPHLIIVVRKNGNELSAPIDIVVV
EEECCCEEHHHHHHHHHHHHCCCCCCCCHHHHEECCCCEEEEEEECCCCCCCCCEEEEEE
NLQQEKRQTLTKEDFQLIAKSYCNQYFSKNNPSVCDSLREKLYSHVLQSAANNRVHTDTS
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCEECCCE
IKLNGIHLFEFKETLLNTFFTIEKEKNYSHGNEDHTALSGNTIQY
EEECCEEEHHHHHHHHHHHEEEECCCCCCCCCCCCCEECCCCCCC
>Mature Secondary Structure 
GYHFLTEGNGIIACYDMYPTQFHSIKDMINYLPVLKQMGFNALWINPMQMPGDISGFFK
CCEEEECCCCEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCEE
TDKNNGVKTGNEVTRSLYAMSHPLLFNPQFSLGSPEDPMETTQRLNSEALQLFTQNARNL
ECCCCCCCCHHHHHHHHHHHCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCC
GIVPMFDLVLNHVAIDSPLCQDKPHWFKGVHEDFKDVRGFNYDDESIRKEIITEFWQPYI
CCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
KRYMIEYGFDGVRVDAVGYVYPAVRSEIYAYIHSLAAENGKPKPVILDEALFSKRPLADE
HHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECHHHHCCCCCCCC
VNYLKLPGIGPTHITTEAYNVEFDLASADLPYEITLEEQLKASVVFQQKDGTWRENTKGG
CCEEECCCCCCCCEEEEEEEEEEEEECCCCCEEEEHHHHHCEEEEEEECCCCCCCCCCCC
CINFCGNHDYRSLAMTILFQMAKKRLKSDAFYNDLMSSYQDLYFKFNAEQEKPHELKEPL
EEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCHHHHHHH
KTTLLYSYVDQIKKELEDNQDETAQEFKTLVLEKLALSALTASGGWFLLSGDETCDITAK
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHH
TVFQRKGAVDKSYYPQREHRIFSEKPVIAHKILEKMAEENFFIENSENKWMQELYRSLSS
HHHHHCCCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHCCEEEECCCCHHHHHHHHHHHH
FPEMQKRLLVSHIDNIKYQINAGIDHVQEKFSRLLASESLNIGFTSQDFSENPRTHENGW
HHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCE
LGLQNNFLFIKQLNTLLKTLPASLPGFSSELVRLTGKPHLIIVVRKNGNELSAPIDIVVV
EEECCCEEHHHHHHHHHHHHCCCCCCCCHHHHEECCCCEEEEEEECCCCCCCCCEEEEEE
NLQQEKRQTLTKEDFQLIAKSYCNQYFSKNNPSVCDSLREKLYSHVLQSAANNRVHTDTS
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCEECCCE
IKLNGIHLFEFKETLLNTFFTIEKEKNYSHGNEDHTALSGNTIQY
EEECCEEEHHHHHHHHHHHEEEECCCCCCCCCCCCCEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA