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The map label for this gene is 54294470

Identifier: 54294470

GI number: 54294470

Start: 1713583

End: 1714614

Strand: Reverse

Name: 54294470

Synonym: lpl1539

Alternate gene names: NA

Gene position: 1714614-1713583 (Counterclockwise)

Preceding gene: 54294471

Following gene: 54294469

Centisome position: 51.25

GC content: 36.34

Gene sequence:

>1032_bases
ATGCGTAGAAGTAAAGCAATGCAAATACCTAAAAAAAGAACACGAATTTTAACTATTTCAGAATCAAGTAAAGAAGATTT
GGATGTTGTACCCGAGTATTCTGAGGAACTGGATGTTTCTCCCAGCAAAGAAACAAGCAAAACTAACAGTAAAAAACTGG
AGAGTATTGCTCGTAAAGAGCAGATCAAGAAATTAGAAGGAGAGCTTTACAGTCATATTCAAGATGCTATCGAATTAGAA
GAAGAGTCTTTTGCAGAATTCAGCATTAACACTGGAAGACCTGGTAATTATTTATTTCGCTTTGTCAGTGAAAAAGAATA
TTTGGCAATTCTTGAAAATTTAAATCAAGGAAAGAGAATATTTGGTAACAAGAAAAAAGTATTGGAAGAAGAGGACGAAA
AGATATCAACTAAAGCAAAAGGAGAAACTTTTTTTGCTTTTGATCTTAAATATGCTCAAAAATATTTCAATAAAGGCACA
CGACGTAATGGAGTAATGCTTGCCATAGAATTGCACGAAGATGCCGATAGTAAACTATTATCTAATACTGAAATTGTTAG
AAGAATTGGAGATGATCCCGGAATGGCTGGTGGCCGATGGGCTAAATGCAAGAAGGTAAAGCCTGGTGAACGAGGGGTAG
TAGTAGCTAAATGTGAAGGAGTTCGTGCAGGATGTAAGTATCCATATACCTTGGGGTTTAGAGAGGGAGAAGAGGGGGTT
AGTCCTTTCGATACACTATTTGAGCTAATACGTTCTGTAAAGGTCCTTGATAACAATGGCAGTTGTAAAACTATTTATCA
TTGCTCAGTACCTGCGCCAAGAGAAAAAGAGCTTACAAATATTGTGAAAGATGCTGAAAATGCTATAGACGAGATTCATA
GTGATGAATTTTTGTCAGTTGTTTCAAGTTTTCCTTCATCACGCTTTGGTTTCTTTACAAACAAGGAACTCTCGGGTATT
TCAGGATTGGTAAATAAGGCACCAGAACATGAAATATTACCCTCTGATGATAAGACCTCCTTGCACCATTAA

Upstream 100 bases:

>100_bases
AGATTGCAATCCATTTCATTTTGCTGATAATGTGCAAAATAGATCGTGTAAGAATAATATAAGCACATATTGTATATTGT
AACGATGTTAGGAGAGTTAG

Downstream 100 bases:

>100_bases
ATCAAGTTAAATTTTTAAGGCTTTAAACGGGCAAGTAAATATTATTTATTTGCCCGTTTCTGAGTATATCCTTCATAGCA
AGGGTTAGCCACATACAAGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 343; Mature: 343

Protein sequence:

>343_residues
MRRSKAMQIPKKRTRILTISESSKEDLDVVPEYSEELDVSPSKETSKTNSKKLESIARKEQIKKLEGELYSHIQDAIELE
EESFAEFSINTGRPGNYLFRFVSEKEYLAILENLNQGKRIFGNKKKVLEEEDEKISTKAKGETFFAFDLKYAQKYFNKGT
RRNGVMLAIELHEDADSKLLSNTEIVRRIGDDPGMAGGRWAKCKKVKPGERGVVVAKCEGVRAGCKYPYTLGFREGEEGV
SPFDTLFELIRSVKVLDNNGSCKTIYHCSVPAPREKELTNIVKDAENAIDEIHSDEFLSVVSSFPSSRFGFFTNKELSGI
SGLVNKAPEHEILPSDDKTSLHH

Sequences:

>Translated_343_residues
MRRSKAMQIPKKRTRILTISESSKEDLDVVPEYSEELDVSPSKETSKTNSKKLESIARKEQIKKLEGELYSHIQDAIELE
EESFAEFSINTGRPGNYLFRFVSEKEYLAILENLNQGKRIFGNKKKVLEEEDEKISTKAKGETFFAFDLKYAQKYFNKGT
RRNGVMLAIELHEDADSKLLSNTEIVRRIGDDPGMAGGRWAKCKKVKPGERGVVVAKCEGVRAGCKYPYTLGFREGEEGV
SPFDTLFELIRSVKVLDNNGSCKTIYHCSVPAPREKELTNIVKDAENAIDEIHSDEFLSVVSSFPSSRFGFFTNKELSGI
SGLVNKAPEHEILPSDDKTSLHH
>Mature_343_residues
MRRSKAMQIPKKRTRILTISESSKEDLDVVPEYSEELDVSPSKETSKTNSKKLESIARKEQIKKLEGELYSHIQDAIELE
EESFAEFSINTGRPGNYLFRFVSEKEYLAILENLNQGKRIFGNKKKVLEEEDEKISTKAKGETFFAFDLKYAQKYFNKGT
RRNGVMLAIELHEDADSKLLSNTEIVRRIGDDPGMAGGRWAKCKKVKPGERGVVVAKCEGVRAGCKYPYTLGFREGEEGV
SPFDTLFELIRSVKVLDNNGSCKTIYHCSVPAPREKELTNIVKDAENAIDEIHSDEFLSVVSSFPSSRFGFFTNKELSGI
SGLVNKAPEHEILPSDDKTSLHH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38715; Mature: 38715

Theoretical pI: Translated: 6.88; Mature: 6.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRSKAMQIPKKRTRILTISESSKEDLDVVPEYSEELDVSPSKETSKTNSKKLESIARKE
CCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHH
QIKKLEGELYSHIQDAIELEEESFAEFSINTGRPGNYLFRFVSEKEYLAILENLNQGKRI
HHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHCCHHHHHHHHHCCCCHHH
FGNKKKVLEEEDEKISTKAKGETFFAFDLKYAQKYFNKGTRRNGVMLAIELHEDADSKLL
HCCHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHCCCCCCCEEEEEEECCCCCHHHH
SNTEIVRRIGDDPGMAGGRWAKCKKVKPGERGVVVAKCEGVRAGCKYPYTLGFREGEEGV
HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCEEECCCCCCCCC
SPFDTLFELIRSVKVLDNNGSCKTIYHCSVPAPREKELTNIVKDAENAIDEIHSDEFLSV
CHHHHHHHHHHHHEEECCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHH
VSSFPSSRFGFFTNKELSGISGLVNKAPEHEILPSDDKTSLHH
HHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRRSKAMQIPKKRTRILTISESSKEDLDVVPEYSEELDVSPSKETSKTNSKKLESIARKE
CCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHH
QIKKLEGELYSHIQDAIELEEESFAEFSINTGRPGNYLFRFVSEKEYLAILENLNQGKRI
HHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHCCHHHHHHHHHCCCCHHH
FGNKKKVLEEEDEKISTKAKGETFFAFDLKYAQKYFNKGTRRNGVMLAIELHEDADSKLL
HCCHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHCCCCCCCEEEEEEECCCCCHHHH
SNTEIVRRIGDDPGMAGGRWAKCKKVKPGERGVVVAKCEGVRAGCKYPYTLGFREGEEGV
HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCEEECCCCCCCCC
SPFDTLFELIRSVKVLDNNGSCKTIYHCSVPAPREKELTNIVKDAENAIDEIHSDEFLSV
CHHHHHHHHHHHHEEECCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHH
VSSFPSSRFGFFTNKELSGISGLVNKAPEHEILPSDDKTSLHH
HHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA