Click here to switch to the map view.

The map label for this gene is 54294368

Identifier: 54294368

GI number: 54294368

Start: 1602384

End: 1604402

Strand: Direct

Name: 54294368

Synonym: lpl1437

Alternate gene names: NA

Gene position: 1602384-1604402 (Clockwise)

Preceding gene: 54294367

Following gene: 54294373

Centisome position: 47.89

GC content: 34.97

Gene sequence:

>2019_bases
ATGTCTCATTCCAAAAGAGAACAAAACCCTATTGCCCGGAATTTAAGTGATTTTAGGCAAGTTGCAACACTATTAAATAA
CGAGGGTCTTGTTGTTACTGAACATAACTATAAAAAAGTCCAAGCCTTATTAAATAGATATAAAGAGCTAGCAACCTTCA
ATGATCAAAATCAAAGCAAATTAAATGGAAAACAAATAGGTGAATTAAATCAAATTAGATTAATTATTTCTCCGGAAGAG
CGGCGAGAAATCAGAAAAAGTGTTACACGTATCGAAAATGGAATAAAAAATAGAGAAGAAAGAATAAAAGAAGAATATAC
GAGAATAGAAAAACAACAGGCTAAGGCAAGAGAAGCAATTCAAGTTTTATGGCCACAGTTGCAAAAAGCAGCCAAAAAAT
TTATAAATTCTGGAATAGCAAACATGGAAGAGCTATTGAAAGAATATAAAGACTTAAGAAATGAGTTATATAATCATGCG
CTTAATCTTCCTACTCAGGAAAGAAAGCAAAAAAATCAAGAGATGGCTGAATTATCGCGTCTTGTTAATATACATGAAAG
CAAATTATACGAAGAAATTAATCGAGCTAGGAAGGTAATTGAAGCTGCAGTGACTCAAGCACAAAAGAATGTAGACAGCA
TGTCATTGCTGCAAATGGTTCGATTCATGCTGCCTAAATTGAAAGAAGCAGATATATTAAAAATTGCTCAAAAAGCTGGA
GTACTTTCCTTACAGGATACAACAACCTCTGAACATGGGGCAACTTTAGATAAATTGGTCGTAAGAGAACAGCCATTAGA
AAAACAGTCTGCTCTAATTTCTATAATATTCAAGGAATTGACTCTCAATGGTGCTCAGGCTGGTCCTCTGGCAAAATACC
TCCAGGCAGTTCAAGAAAATGCAAAAGATCTAATAAGTGGTAAAAAAACTCACTTTACTCTGCTTTATCAAACAAATGAG
GGTGAAATTGGAGGGTTTTATTTTAACATTCATGAATTGTTGCAGAATCAGCATCAAGCAATTTCCAAGCTTGTACATGA
AATGTATAAAAGAGGAGTAGATCAAAACAGTCGAGTTGTAATGGCTTTTGCTAGCCCAGAACAAGCTGCGTCTTTGATGT
TAGCTAATGGAGAAAATATTAAAGCATTAACTGAAGCTGGCAATTTACAAGAGTTAACTGAACAATTATTAGAAAATGCT
GGTGATTCAAAAGCATTGGCTCGCATAGTAGGACATGATGTTGTAATTGGCCAGAAAACTTCAGAAATAATTAGAGATCT
TAATCGTTCAAAAGAGCAAAATGGTATAGAGCCAGCTGAAGTAATGAAATTATTTCAAATAATTGCAGTAATATTTGAAA
CTCGAAATATTTTAATCAATTGGATAAATGCTCCTGTGCATTTGAAGGAACAAACGGAGGAAGCTTTATTGGGCGCAGGT
AAATCTCCTGTCATCGTTGAGGGCAAAGGAACCCAACCCAAACGCGTAAGATTCCTACCTGATTTAGTGGAAAAGCCAAA
AGCTATATCGACAGATACTGAACAACCTGTTACCAAAAGAACAGATGATGAACTACTTGATAAAAAAATACAAGTTGCAT
TAGAAAAGGTTGATCAAGCATTAGAAGAACTGAAAGGTAAAATAGGAGATATCAATCAACATAAATATGACAAAGCCTAT
GAAGCAGCAAAAATTCTTCTAAGACAATTGCAAGAAACACGTGATCAATATGCTATTGATTTAGCTAATCCTCAAATCAA
TTTCAAAGAGGCAGGGCTTAAATTTAAAGAAGCTAGTAATTTGGTGATTCAAAAGGCCAAACCTATCCTGGAAAAGGATT
TAGGTTGGGGAGAATACCTCAAGAACTTGTTTAAAGTGATAGTAAACGCTATTGTATTTTGTGTGACTTTTGGAGCAAGT
CAAGGCTTCTTTGCTACGACACGTGCGAAATCTGCTGAAGCATTGGAGAAAGCGGAGAGCGAACTGGAACTAAATCAACT
CGGTTCATTACCAAAATAA

Upstream 100 bases:

>100_bases
CGCACAACTTGTATTCTATTATTCAATTGCCCAATTAAATGTGACAAAATAGTATTCATTGATTATAATGCGAGCACTCT
AAACACCAAGGAATCATTAT

Downstream 100 bases:

>100_bases
TACTATGGTTAACTAGTTTGTTATGAGAGCAACATTCGATTTTTATTATACATATAATGAGTAATGGAAATCGATGTTGC
TTTTTTGAGATTCAGCCTAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 672; Mature: 671

Protein sequence:

>672_residues
MSHSKREQNPIARNLSDFRQVATLLNNEGLVVTEHNYKKVQALLNRYKELATFNDQNQSKLNGKQIGELNQIRLIISPEE
RREIRKSVTRIENGIKNREERIKEEYTRIEKQQAKAREAIQVLWPQLQKAAKKFINSGIANMEELLKEYKDLRNELYNHA
LNLPTQERKQKNQEMAELSRLVNIHESKLYEEINRARKVIEAAVTQAQKNVDSMSLLQMVRFMLPKLKEADILKIAQKAG
VLSLQDTTTSEHGATLDKLVVREQPLEKQSALISIIFKELTLNGAQAGPLAKYLQAVQENAKDLISGKKTHFTLLYQTNE
GEIGGFYFNIHELLQNQHQAISKLVHEMYKRGVDQNSRVVMAFASPEQAASLMLANGENIKALTEAGNLQELTEQLLENA
GDSKALARIVGHDVVIGQKTSEIIRDLNRSKEQNGIEPAEVMKLFQIIAVIFETRNILINWINAPVHLKEQTEEALLGAG
KSPVIVEGKGTQPKRVRFLPDLVEKPKAISTDTEQPVTKRTDDELLDKKIQVALEKVDQALEELKGKIGDINQHKYDKAY
EAAKILLRQLQETRDQYAIDLANPQINFKEAGLKFKEASNLVIQKAKPILEKDLGWGEYLKNLFKVIVNAIVFCVTFGAS
QGFFATTRAKSAEALEKAESELELNQLGSLPK

Sequences:

>Translated_672_residues
MSHSKREQNPIARNLSDFRQVATLLNNEGLVVTEHNYKKVQALLNRYKELATFNDQNQSKLNGKQIGELNQIRLIISPEE
RREIRKSVTRIENGIKNREERIKEEYTRIEKQQAKAREAIQVLWPQLQKAAKKFINSGIANMEELLKEYKDLRNELYNHA
LNLPTQERKQKNQEMAELSRLVNIHESKLYEEINRARKVIEAAVTQAQKNVDSMSLLQMVRFMLPKLKEADILKIAQKAG
VLSLQDTTTSEHGATLDKLVVREQPLEKQSALISIIFKELTLNGAQAGPLAKYLQAVQENAKDLISGKKTHFTLLYQTNE
GEIGGFYFNIHELLQNQHQAISKLVHEMYKRGVDQNSRVVMAFASPEQAASLMLANGENIKALTEAGNLQELTEQLLENA
GDSKALARIVGHDVVIGQKTSEIIRDLNRSKEQNGIEPAEVMKLFQIIAVIFETRNILINWINAPVHLKEQTEEALLGAG
KSPVIVEGKGTQPKRVRFLPDLVEKPKAISTDTEQPVTKRTDDELLDKKIQVALEKVDQALEELKGKIGDINQHKYDKAY
EAAKILLRQLQETRDQYAIDLANPQINFKEAGLKFKEASNLVIQKAKPILEKDLGWGEYLKNLFKVIVNAIVFCVTFGAS
QGFFATTRAKSAEALEKAESELELNQLGSLPK
>Mature_671_residues
SHSKREQNPIARNLSDFRQVATLLNNEGLVVTEHNYKKVQALLNRYKELATFNDQNQSKLNGKQIGELNQIRLIISPEER
REIRKSVTRIENGIKNREERIKEEYTRIEKQQAKAREAIQVLWPQLQKAAKKFINSGIANMEELLKEYKDLRNELYNHAL
NLPTQERKQKNQEMAELSRLVNIHESKLYEEINRARKVIEAAVTQAQKNVDSMSLLQMVRFMLPKLKEADILKIAQKAGV
LSLQDTTTSEHGATLDKLVVREQPLEKQSALISIIFKELTLNGAQAGPLAKYLQAVQENAKDLISGKKTHFTLLYQTNEG
EIGGFYFNIHELLQNQHQAISKLVHEMYKRGVDQNSRVVMAFASPEQAASLMLANGENIKALTEAGNLQELTEQLLENAG
DSKALARIVGHDVVIGQKTSEIIRDLNRSKEQNGIEPAEVMKLFQIIAVIFETRNILINWINAPVHLKEQTEEALLGAGK
SPVIVEGKGTQPKRVRFLPDLVEKPKAISTDTEQPVTKRTDDELLDKKIQVALEKVDQALEELKGKIGDINQHKYDKAYE
AAKILLRQLQETRDQYAIDLANPQINFKEAGLKFKEASNLVIQKAKPILEKDLGWGEYLKNLFKVIVNAIVFCVTFGASQ
GFFATTRAKSAEALEKAESELELNQLGSLPK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 76082; Mature: 75951

Theoretical pI: Translated: 9.34; Mature: 9.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.1 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.1 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSHSKREQNPIARNLSDFRQVATLLNNEGLVVTEHNYKKVQALLNRYKELATFNDQNQSK
CCCCCCCCCHHHCCHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHCCCCCHHH
LNGKQIGELNQIRLIISPEERREIRKSVTRIENGIKNREERIKEEYTRIEKQQAKAREAI
CCCHHCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QVLWPQLQKAAKKFINSGIANMEELLKEYKDLRNELYNHALNLPTQERKQKNQEMAELSR
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
LVNIHESKLYEEINRARKVIEAAVTQAQKNVDSMSLLQMVRFMLPKLKEADILKIAQKAG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHHHCC
VLSLQDTTTSEHGATLDKLVVREQPLEKQSALISIIFKELTLNGAQAGPLAKYLQAVQEN
CEEEECCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH
AKDLISGKKTHFTLLYQTNEGEIGGFYFNIHELLQNQHQAISKLVHEMYKRGVDQNSRVV
HHHHHCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEE
MAFASPEQAASLMLANGENIKALTEAGNLQELTEQLLENAGDSKALARIVGHDVVIGQKT
EEECCHHHHHHHHHCCCCCCHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHCHHEECCCH
SEIIRDLNRSKEQNGIEPAEVMKLFQIIAVIFETRNILINWINAPVHLKEQTEEALLGAG
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHCCC
KSPVIVEGKGTQPKRVRFLPDLVEKPKAISTDTEQPVTKRTDDELLDKKIQVALEKVDQA
CCCEEEECCCCCCHHHHCCHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
LEELKGKIGDINQHKYDKAYEAAKILLRQLQETRDQYAIDLANPQINFKEAGLKFKEASN
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCHHHHCCCHHHHHH
LVIQKAKPILEKDLGWGEYLKNLFKVIVNAIVFCVTFGASQGFFATTRAKSAEALEKAES
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHH
ELELNQLGSLPK
HHHHHHHCCCCC
>Mature Secondary Structure 
SHSKREQNPIARNLSDFRQVATLLNNEGLVVTEHNYKKVQALLNRYKELATFNDQNQSK
CCCCCCCCHHHCCHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHCCCCCHHH
LNGKQIGELNQIRLIISPEERREIRKSVTRIENGIKNREERIKEEYTRIEKQQAKAREAI
CCCHHCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QVLWPQLQKAAKKFINSGIANMEELLKEYKDLRNELYNHALNLPTQERKQKNQEMAELSR
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
LVNIHESKLYEEINRARKVIEAAVTQAQKNVDSMSLLQMVRFMLPKLKEADILKIAQKAG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHHHCC
VLSLQDTTTSEHGATLDKLVVREQPLEKQSALISIIFKELTLNGAQAGPLAKYLQAVQEN
CEEEECCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH
AKDLISGKKTHFTLLYQTNEGEIGGFYFNIHELLQNQHQAISKLVHEMYKRGVDQNSRVV
HHHHHCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEE
MAFASPEQAASLMLANGENIKALTEAGNLQELTEQLLENAGDSKALARIVGHDVVIGQKT
EEECCHHHHHHHHHCCCCCCHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHCHHEECCCH
SEIIRDLNRSKEQNGIEPAEVMKLFQIIAVIFETRNILINWINAPVHLKEQTEEALLGAG
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHCCC
KSPVIVEGKGTQPKRVRFLPDLVEKPKAISTDTEQPVTKRTDDELLDKKIQVALEKVDQA
CCCEEEECCCCCCHHHHCCHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
LEELKGKIGDINQHKYDKAYEAAKILLRQLQETRDQYAIDLANPQINFKEAGLKFKEASN
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCHHHHCCCHHHHHH
LVIQKAKPILEKDLGWGEYLKNLFKVIVNAIVFCVTFGASQGFFATTRAKSAEALEKAES
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHH
ELELNQLGSLPK
HHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA