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The map label for this gene is 54294353

Identifier: 54294353

GI number: 54294353

Start: 1587325

End: 1588002

Strand: Direct

Name: 54294353

Synonym: lpl1421

Alternate gene names: NA

Gene position: 1587325-1588002 (Clockwise)

Preceding gene: 54294352

Following gene: 54294355

Centisome position: 47.44

GC content: 34.37

Gene sequence:

>678_bases
ATGTATTCCTATATAGATTTTAATGATAAAGTGCATAGACTCATACCTTCTAAATTCCCTCCCGTGACTTTATTCGATTG
GGCTGATTCTGCAGAAGAGCTCGAACAAATAGCTCTACTTGAAGGCTTAACCAATGAAAGGATACTTGCGGAGTTCGGTA
AAATAAATTTGATAGATCAAGAGGATTGGATTGGTGGTCTTGGATCTACTCCAATAATGGCTGCTTTTACACATACTGGA
TTTGAATCAAGATTTAGTGATGGCAGTTTTGGTATTTATTATGCCGCTTCATCTCTTGAAACAGCAATAAAGGAAACTTG
CTTTCATCGAGAACGATTTTATAGCGCATCAAATGAAAAACCTTGCTCCATCTCAATGAGAGAGTATGTAGCTAATATAA
AAAAACCATTAATAGATATTACAGATAAAAGTTATAAAGACTTGTTTAATCCTGATCCTGCTTGTTATAGTAAAAGTCAG
GAATTTGGCAAGAAAATTTGTGAAAAGAAGGAATGGGGCTTGCTATACCCAAGTGTAAGAGATTTAAATGGCTTATGTGT
GGCTGTATTAAGACCTCCCGCTCTCACTATACCGATACAAGGATGCCATTTAAGATATATTTGGGATGGTGAAAAAATTT
CAGATATTTATAAAGAAAGTAAAATTACCAATATTTAA

Upstream 100 bases:

>100_bases
CCGTTTAAAGGTTTAACACCCAAAGAATATATGCTGGAAGGGGGGATGGTTCGTCTTGCAGATGTAAGGAAGTTTCTGGA
CTTTTGGCGAGGTTATTAGG

Downstream 100 bases:

>100_bases
GATATTTTTCCCAAATTGTGGCTAGATAACTTTCTCATGAATGATGCAAATGCATTAAACGAAAGAGTTATCAATCTATC
TTTTTCCCAGTTGGCTTTCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 225; Mature: 225

Protein sequence:

>225_residues
MYSYIDFNDKVHRLIPSKFPPVTLFDWADSAEELEQIALLEGLTNERILAEFGKINLIDQEDWIGGLGSTPIMAAFTHTG
FESRFSDGSFGIYYAASSLETAIKETCFHRERFYSASNEKPCSISMREYVANIKKPLIDITDKSYKDLFNPDPACYSKSQ
EFGKKICEKKEWGLLYPSVRDLNGLCVAVLRPPALTIPIQGCHLRYIWDGEKISDIYKESKITNI

Sequences:

>Translated_225_residues
MYSYIDFNDKVHRLIPSKFPPVTLFDWADSAEELEQIALLEGLTNERILAEFGKINLIDQEDWIGGLGSTPIMAAFTHTG
FESRFSDGSFGIYYAASSLETAIKETCFHRERFYSASNEKPCSISMREYVANIKKPLIDITDKSYKDLFNPDPACYSKSQ
EFGKKICEKKEWGLLYPSVRDLNGLCVAVLRPPALTIPIQGCHLRYIWDGEKISDIYKESKITNI
>Mature_225_residues
MYSYIDFNDKVHRLIPSKFPPVTLFDWADSAEELEQIALLEGLTNERILAEFGKINLIDQEDWIGGLGSTPIMAAFTHTG
FESRFSDGSFGIYYAASSLETAIKETCFHRERFYSASNEKPCSISMREYVANIKKPLIDITDKSYKDLFNPDPACYSKSQ
EFGKKICEKKEWGLLYPSVRDLNGLCVAVLRPPALTIPIQGCHLRYIWDGEKISDIYKESKITNI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25632; Mature: 25632

Theoretical pI: Translated: 5.16; Mature: 5.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYSYIDFNDKVHRLIPSKFPPVTLFDWADSAEELEQIALLEGLTNERILAEFGKINLIDQ
CCCCCCCCCHHHHHCCCCCCCEEEECCCCCHHHHHHHHHHHCCCCCHHHHHHCCEEEECC
EDWIGGLGSTPIMAAFTHTGFESRFSDGSFGIYYAASSLETAIKETCFHRERFYSASNEK
HHHCCCCCCCCCEEHHHHCCCHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCCCC
PCSISMREYVANIKKPLIDITDKSYKDLFNPDPACYSKSQEFGKKICEKKEWGLLYPSVR
CCEEEHHHHHHHHHHHHEECCCCHHHHHCCCCHHHHCCHHHHHHHHHCCCCCCEECCCCC
DLNGLCVAVLRPPALTIPIQGCHLRYIWDGEKISDIYKESKITNI
CCCCEEEEEECCCEEEEECCCCEEEEEECCHHHHHHHHHHHCCCC
>Mature Secondary Structure
MYSYIDFNDKVHRLIPSKFPPVTLFDWADSAEELEQIALLEGLTNERILAEFGKINLIDQ
CCCCCCCCCHHHHHCCCCCCCEEEECCCCCHHHHHHHHHHHCCCCCHHHHHHCCEEEECC
EDWIGGLGSTPIMAAFTHTGFESRFSDGSFGIYYAASSLETAIKETCFHRERFYSASNEK
HHHCCCCCCCCCEEHHHHCCCHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCCCC
PCSISMREYVANIKKPLIDITDKSYKDLFNPDPACYSKSQEFGKKICEKKEWGLLYPSVR
CCEEEHHHHHHHHHHHHEECCCCHHHHHCCCCHHHHCCHHHHHHHHHCCCCCCEECCCCC
DLNGLCVAVLRPPALTIPIQGCHLRYIWDGEKISDIYKESKITNI
CCCCEEEEEECCCEEEEECCCCEEEEEECCHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]