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The map label for this gene is yfiC [C]

Identifier: 54294351

GI number: 54294351

Start: 1586077

End: 1586736

Strand: Reverse

Name: yfiC [C]

Synonym: lpl1419

Alternate gene names: 54294351

Gene position: 1586736-1586077 (Counterclockwise)

Preceding gene: 54294354

Following gene: 54294350

Centisome position: 47.43

GC content: 33.94

Gene sequence:

>660_bases
ATGATTGATACAATACAGAGCGAACCAAAAATAAATTTTACTTATAATTACAAACAACCTGACGACTACCATTTCAGTCT
TGATTCAATTCATCTGGCTAAATTTGTTGCAAAACAATTGGAATCCTATCCAGATCTTGGTTCATTAAGAGTATTAGATC
TCTGTGCAGGCTGTGGAGTAATTGGAATTGAACTGTCATGGTATCTTCAAGCAATCCGGCAGATTGATTTTATTGAGATC
CAGGATATTTATACTGAATGTTTTTATCAAAACATAGCTAACGTTAATCGACCTGAGCTGCAATTTCGCTGGCATCTCTT
AAATTATGATGAACTACATAAAAAAAAATGGGAAGACAAATTCGATTTGATTATCAGCAATCCACCCTATTTCCAACCAG
GTCACGGAATGCTTTCCCCTTCAAAATTTAAAAATCGGTGCAGATTTTATTTAGATAGCTCTTTTCAGAGTTATATTCAA
GCGCTGGGAAATGCACTTGCAAACAGAGGTAAAGCTTATTTTTTATTACGTCCATTAAAACACCATGGCCTTGATTTATT
TTCTGACATACAAAAAATCCTGCAGGAAACATCAGTAATAGCAACAAAAATATCGCATATCCGTGGTACAGATATTATTT
TATTGGAAAAACTGAAATGA

Upstream 100 bases:

>100_bases
ACATGCAGAATATGAAATAAATTTCAAAAATCAATTAACAGTGCAACAAGCAAGGGAATAAGGTGCTTTAAAACCATAGT
TAAGAGAAAATAATTTCAAT

Downstream 100 bases:

>100_bases
ATAGTAGTATTCTTTATAGAACATTGATTTTGGTCTGCCTTAAAAAATAAAAATATTTTTCAACACAAATTAAGTATATT
AAAATTGCATGCCAAAGTAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 219; Mature: 219

Protein sequence:

>219_residues
MIDTIQSEPKINFTYNYKQPDDYHFSLDSIHLAKFVAKQLESYPDLGSLRVLDLCAGCGVIGIELSWYLQAIRQIDFIEI
QDIYTECFYQNIANVNRPELQFRWHLLNYDELHKKKWEDKFDLIISNPPYFQPGHGMLSPSKFKNRCRFYLDSSFQSYIQ
ALGNALANRGKAYFLLRPLKHHGLDLFSDIQKILQETSVIATKISHIRGTDIILLEKLK

Sequences:

>Translated_219_residues
MIDTIQSEPKINFTYNYKQPDDYHFSLDSIHLAKFVAKQLESYPDLGSLRVLDLCAGCGVIGIELSWYLQAIRQIDFIEI
QDIYTECFYQNIANVNRPELQFRWHLLNYDELHKKKWEDKFDLIISNPPYFQPGHGMLSPSKFKNRCRFYLDSSFQSYIQ
ALGNALANRGKAYFLLRPLKHHGLDLFSDIQKILQETSVIATKISHIRGTDIILLEKLK
>Mature_219_residues
MIDTIQSEPKINFTYNYKQPDDYHFSLDSIHLAKFVAKQLESYPDLGSLRVLDLCAGCGVIGIELSWYLQAIRQIDFIEI
QDIYTECFYQNIANVNRPELQFRWHLLNYDELHKKKWEDKFDLIISNPPYFQPGHGMLSPSKFKNRCRFYLDSSFQSYIQ
ALGNALANRGKAYFLLRPLKHHGLDLFSDIQKILQETSVIATKISHIRGTDIILLEKLK

Specific function: Unknown

COG id: COG4123

COG function: function code R; Predicted O-methyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25610; Mature: 25610

Theoretical pI: Translated: 7.60; Mature: 7.60

Prosite motif: PS00092 N6_MTASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDTIQSEPKINFTYNYKQPDDYHFSLDSIHLAKFVAKQLESYPDLGSLRVLDLCAGCGV
CCCCCCCCCCEEEEECCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCE
IGIELSWYLQAIRQIDFIEIQDIYTECFYQNIANVNRPELQFRWHLLNYDELHKKKWEDK
EEHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCHHHHHHHHCCCC
FDLIISNPPYFQPGHGMLSPSKFKNRCRFYLDSSFQSYIQALGNALANRGKAYFLLRPLK
CCEEECCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCEEEEEECHH
HHGLDLFSDIQKILQETSVIATKISHIRGTDIILLEKLK
HCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECC
>Mature Secondary Structure
MIDTIQSEPKINFTYNYKQPDDYHFSLDSIHLAKFVAKQLESYPDLGSLRVLDLCAGCGV
CCCCCCCCCCEEEEECCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCE
IGIELSWYLQAIRQIDFIEIQDIYTECFYQNIANVNRPELQFRWHLLNYDELHKKKWEDK
EEHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCHHHHHHHHCCCC
FDLIISNPPYFQPGHGMLSPSKFKNRCRFYLDSSFQSYIQALGNALANRGKAYFLLRPLK
CCEEECCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCEEEEEECHH
HHGLDLFSDIQKILQETSVIATKISHIRGTDIILLEKLK
HCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA