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The map label for this gene is skgA [H]

Identifier: 54294343

GI number: 54294343

Start: 1575001

End: 1575753

Strand: Direct

Name: skgA [H]

Synonym: lpl1411

Alternate gene names: 54294343

Gene position: 1575001-1575753 (Clockwise)

Preceding gene: 54294342

Following gene: 54294344

Centisome position: 47.08

GC content: 35.72

Gene sequence:

>753_bases
ATGGCTTATACGGTAAAACAATTAGCAAAAATATCGAATGTAAGTGTGCGCACTTTACATTGGTATGATGAAATAGGCTT
ATTAAAACCAGCCTATCAAGGTGCTAATGGCTATCGTTATTATGAAGAAAAGCAGTGCTTAAAATTACAGCAAATTTTAT
TCTTCAGAGAGCTGGGATTCCCCTTGAATGATATTCAAAAACTGCTTATGCAAAATAATTTTGACCACATCAAAGCATTG
AGAGCGTATAAACAGGTTTTGGAAAGCGATATCAATCGAAAAAATCAATTGATTGTAACGATTGATAAAACTATTCAACA
TTTAAAAGGTAAGCATAAGATGTCTAATGAAGAATTATATTATGGCTTTGATTCACTGCGACAGAAACAATACGAAAAGG
AATTAGTTAAAGAAGGCGTGGTCAGCCAGGATTGGATGAATAGTTACAAGAAAAAAACAAGCCAATGGACTCAAGCTGAT
AAAGACCGATTTATTCATGAAGGCAAAGATATCAATCAAGCATTGATTTCGGCTATTAATAATCAACTCAAGCCTACTTC
TCCGGAGGTACAAGCCATTATCCATAGGCACCATGCTTGGGTAGGTTGGAACCCAAACAAGGAAGGGTATATTGGGTTAA
GCCAAAGATATTTGACTCCTGAGTTTAGAAAGTTTTATGAGCGGCAGCATCCTGATCTGCTCGAATTCATTATTGAAGGG
ATGCTGTTTTATGCAAACAAGAACCTTGATTAA

Upstream 100 bases:

>100_bases
ATCTCATTTTATGGTTTACAAAAAAATTAAGATGAAATGCTTGACCCTTACGTTACGTGAGCACTTATCTTTAAATGGAA
TCATTTGAGAGGACAGTTTA

Downstream 100 bases:

>100_bases
GCTGAGAGAAGGGCTGTGTCTTATCAGCCCTATATATACCCGTGATCATTCAAAATGCTTGCATTTTTAAATCAAGAAGA
TCATGCTATGCGCCATGAAA

Product: hypothetical protein

Products: NA

Alternate protein names: Stationary-phase regulation of katG protein [H]

Number of amino acids: Translated: 250; Mature: 249

Protein sequence:

>250_residues
MAYTVKQLAKISNVSVRTLHWYDEIGLLKPAYQGANGYRYYEEKQCLKLQQILFFRELGFPLNDIQKLLMQNNFDHIKAL
RAYKQVLESDINRKNQLIVTIDKTIQHLKGKHKMSNEELYYGFDSLRQKQYEKELVKEGVVSQDWMNSYKKKTSQWTQAD
KDRFIHEGKDINQALISAINNQLKPTSPEVQAIIHRHHAWVGWNPNKEGYIGLSQRYLTPEFRKFYERQHPDLLEFIIEG
MLFYANKNLD

Sequences:

>Translated_250_residues
MAYTVKQLAKISNVSVRTLHWYDEIGLLKPAYQGANGYRYYEEKQCLKLQQILFFRELGFPLNDIQKLLMQNNFDHIKAL
RAYKQVLESDINRKNQLIVTIDKTIQHLKGKHKMSNEELYYGFDSLRQKQYEKELVKEGVVSQDWMNSYKKKTSQWTQAD
KDRFIHEGKDINQALISAINNQLKPTSPEVQAIIHRHHAWVGWNPNKEGYIGLSQRYLTPEFRKFYERQHPDLLEFIIEG
MLFYANKNLD
>Mature_249_residues
AYTVKQLAKISNVSVRTLHWYDEIGLLKPAYQGANGYRYYEEKQCLKLQQILFFRELGFPLNDIQKLLMQNNFDHIKALR
AYKQVLESDINRKNQLIVTIDKTIQHLKGKHKMSNEELYYGFDSLRQKQYEKELVKEGVVSQDWMNSYKKKTSQWTQADK
DRFIHEGKDINQALISAINNQLKPTSPEVQAIIHRHHAWVGWNPNKEGYIGLSQRYLTPEFRKFYERQHPDLLEFIIEGM
LFYANKNLD

Specific function: Regulates the induction of katG (catalase-peroxidase) in stationary phase [H]

COG id: COG0789

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH merR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009061
- InterPro:   IPR000551
- InterPro:   IPR012925 [H]

Pfam domain/function: PF00376 MerR; PF07739 TipAS [H]

EC number: NA

Molecular weight: Translated: 29703; Mature: 29572

Theoretical pI: Translated: 9.61; Mature: 9.61

Prosite motif: PS50937 HTH_MERR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAYTVKQLAKISNVSVRTLHWYDEIGLLKPAYQGANGYRYYEEKQCLKLQQILFFRELGF
CCCHHHHHHHHHCCCEEEEEHHHHHCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCC
PLNDIQKLLMQNNFDHIKALRAYKQVLESDINRKNQLIVTIDKTIQHLKGKHKMSNEELY
CHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHCCCCCHHE
YGFDSLRQKQYEKELVKEGVVSQDWMNSYKKKTSQWTQADKDRFIHEGKDINQALISAIN
ECHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
NQLKPTSPEVQAIIHRHHAWVGWNPNKEGYIGLSQRYLTPEFRKFYERQHPDLLEFIIEG
HCCCCCCHHHHHHHHHHCCEECCCCCCCCCEECHHHHCCHHHHHHHHHCCCHHHHHHHHH
MLFYANKNLD
HHHHHCCCCC
>Mature Secondary Structure 
AYTVKQLAKISNVSVRTLHWYDEIGLLKPAYQGANGYRYYEEKQCLKLQQILFFRELGF
CCHHHHHHHHHCCCEEEEEHHHHHCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCC
PLNDIQKLLMQNNFDHIKALRAYKQVLESDINRKNQLIVTIDKTIQHLKGKHKMSNEELY
CHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHCCCCCHHE
YGFDSLRQKQYEKELVKEGVVSQDWMNSYKKKTSQWTQADKDRFIHEGKDINQALISAIN
ECHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
NQLKPTSPEVQAIIHRHHAWVGWNPNKEGYIGLSQRYLTPEFRKFYERQHPDLLEFIIEG
HCCCCCCHHHHHHHHHHCCEECCCCCCCCCEECHHHHCCHHHHHHHHHCCCHHHHHHHHH
MLFYANKNLD
HHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10498730 [H]