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The map label for this gene is 54294327

Identifier: 54294327

GI number: 54294327

Start: 1555031

End: 1555522

Strand: Reverse

Name: 54294327

Synonym: lpl1393

Alternate gene names: NA

Gene position: 1555522-1555031 (Counterclockwise)

Preceding gene: 54294328

Following gene: 54294326

Centisome position: 46.49

GC content: 40.85

Gene sequence:

>492_bases
ATGATTATAAAAGATATGAGTATAATTGGTGGAATACCAGGAGCAATTACTGCTTTGGCTGCCATTATAACGAAAAACAG
TGTCCCAGATAGCATAACTGCAGGGGTCATTTCATCACTTAGTGCATGTAGTTCAGTTGAGGCTGTTAGATATGCATTCC
TCTATCGAACTTGCCCGCCTATTGCTGACGTGGCTCTATTTACAGGGGGGGCTATCCTATCTGGACAAATTCTACTTACA
ATGGCCCAACTTCTTATTACCACAGACTTATCAAGACCTGCATTAGCCCTCAACCAAGCAGTAGTTGTCTCCTCACTCCT
TCTTGGCATCATGATTTATCGTGATTTAAAGTACAGAGTAAACCTTATAAATGGCAACTCAGGTATATCTTTTTTCGGCT
CAATTAAACAGACATTTTTTGGGTCTAACTCGACACCTCCCAAAAATGAAAATGAAAACGCCCCCAATGCTCAGAGAAGT
CTAGCCATCTAA

Upstream 100 bases:

>100_bases
AAGCTATGCAAGTAGAATTTGCATAGCCTACTGGATGTGTGGTTGACATTGTGCTCCTTATTCCTATTATCCGCTTTTTA
CTTTAACAGAGGATACAAAC

Downstream 100 bases:

>100_bases
ACAACATCCTTTACATGATTTGTAGAGCATATTTAAGAGCGATGAGTGTCGCTCTTAAATAATAAATTGCGAGTCAAGCT
TATCGAACTCAAAAACTTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 163; Mature: 163

Protein sequence:

>163_residues
MIIKDMSIIGGIPGAITALAAIITKNSVPDSITAGVISSLSACSSVEAVRYAFLYRTCPPIADVALFTGGAILSGQILLT
MAQLLITTDLSRPALALNQAVVVSSLLLGIMIYRDLKYRVNLINGNSGISFFGSIKQTFFGSNSTPPKNENENAPNAQRS
LAI

Sequences:

>Translated_163_residues
MIIKDMSIIGGIPGAITALAAIITKNSVPDSITAGVISSLSACSSVEAVRYAFLYRTCPPIADVALFTGGAILSGQILLT
MAQLLITTDLSRPALALNQAVVVSSLLLGIMIYRDLKYRVNLINGNSGISFFGSIKQTFFGSNSTPPKNENENAPNAQRS
LAI
>Mature_163_residues
MIIKDMSIIGGIPGAITALAAIITKNSVPDSITAGVISSLSACSSVEAVRYAFLYRTCPPIADVALFTGGAILSGQILLT
MAQLLITTDLSRPALALNQAVVVSSLLLGIMIYRDLKYRVNLINGNSGISFFGSIKQTFFGSNSTPPKNENENAPNAQRS
LAI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17119; Mature: 17119

Theoretical pI: Translated: 9.18; Mature: 9.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIIKDMSIIGGIPGAITALAAIITKNSVPDSITAGVISSLSACSSVEAVRYAFLYRTCPP
CCCCCCHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
IADVALFTGGAILSGQILLTMAQLLITTDLSRPALALNQAVVVSSLLLGIMIYRDLKYRV
HHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEE
NLINGNSGISFFGSIKQTFFGSNSTPPKNENENAPNAQRSLAI
EEEECCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHCCCC
>Mature Secondary Structure
MIIKDMSIIGGIPGAITALAAIITKNSVPDSITAGVISSLSACSSVEAVRYAFLYRTCPP
CCCCCCHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
IADVALFTGGAILSGQILLTMAQLLITTDLSRPALALNQAVVVSSLLLGIMIYRDLKYRV
HHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEE
NLINGNSGISFFGSIKQTFFGSNSTPPKNENENAPNAQRSLAI
EEEECCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA