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The map label for this gene is yebC [C]

Identifier: 54294185

GI number: 54294185

Start: 1392629

End: 1393372

Strand: Direct

Name: yebC [C]

Synonym: lpl1249

Alternate gene names: 54294185

Gene position: 1392629-1393372 (Clockwise)

Preceding gene: 54294183

Following gene: 54294186

Centisome position: 41.62

GC content: 40.73

Gene sequence:

>744_bases
ATGGCTGGTCATAGTAAATGGGCTAATATCAAATTCCGTAAAGGCGTACAGGATGCCAAAAGAGGGAAAATATTTACTAA
ATTAATTCGTGAAATTACTGTAGCTGCACGTATGGGAGGAGGAGATGAGTCAAGTAATCCACGTTTGAGAGATGCTGTTA
AAAAAGCGCTGAATGCCAATATGAAGCGCGATACCATCGATAATGCTGTCAAGCGAGGGGTAGGGGGAGCTGATGGCGAA
GCAATGATAGCTATGCGTTATGAGGGTTACGGGCCAGGTGGTGTTGCTATATTGGTAGATTGTTTGTCTGACAATAAAAA
TCGAACGGTATCGGAAGTTCGACATGCTTTTTCAAAACATGGAGGTAATTTAGGCACTGATGGTTCAGTATCCTATCTTT
TTACTAATCAAGGTGAAATTCTCATGGCTTCCAATCAACCGGAAGATAAGGTGATGGAGATTGCAATCGATGCTGGCGCT
TCTGATGTTGCTGTAGAGGACAGTCAGATAGAGATCATTACCCCTGTAGAAGCTTATCACACCGTCTTAAATGCTTTACA
GGATGCCGCTTTGGAGGTTGAGCAGTCTCATTTAACTATGCGTGCACAAACCTTGGTTCCAATTAGTGATGAAACGGCTG
AAAGTTTAATTAAACTGATTGATATGCTGGAAGATTTGGATGATGTCCAAGAAGTTTACAGCAATGCTGAATTTTCTGAA
AAAATATTAGAATCAATGAATTAA

Upstream 100 bases:

>100_bases
AAAAGTTCAAATTGTCGAGAGCATCGATGGCTTTAGTCATTCTTTTTGGTGTTAGAGCATTGTATAATCTCCAAATAAAA
ATTCATTTAGAGGTGATGTA

Downstream 100 bases:

>100_bases
TGACGATTATATTAGGGATAGACCCAGGCTCACGGGTTACAGGATATGGATTGATTAAAGAATCTGACCGTAAAATCGCG
TACATCGATAGCGGTTGTAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 247; Mature: 246

Protein sequence:

>247_residues
MAGHSKWANIKFRKGVQDAKRGKIFTKLIREITVAARMGGGDESSNPRLRDAVKKALNANMKRDTIDNAVKRGVGGADGE
AMIAMRYEGYGPGGVAILVDCLSDNKNRTVSEVRHAFSKHGGNLGTDGSVSYLFTNQGEILMASNQPEDKVMEIAIDAGA
SDVAVEDSQIEIITPVEAYHTVLNALQDAALEVEQSHLTMRAQTLVPISDETAESLIKLIDMLEDLDDVQEVYSNAEFSE
KILESMN

Sequences:

>Translated_247_residues
MAGHSKWANIKFRKGVQDAKRGKIFTKLIREITVAARMGGGDESSNPRLRDAVKKALNANMKRDTIDNAVKRGVGGADGE
AMIAMRYEGYGPGGVAILVDCLSDNKNRTVSEVRHAFSKHGGNLGTDGSVSYLFTNQGEILMASNQPEDKVMEIAIDAGA
SDVAVEDSQIEIITPVEAYHTVLNALQDAALEVEQSHLTMRAQTLVPISDETAESLIKLIDMLEDLDDVQEVYSNAEFSE
KILESMN
>Mature_246_residues
AGHSKWANIKFRKGVQDAKRGKIFTKLIREITVAARMGGGDESSNPRLRDAVKKALNANMKRDTIDNAVKRGVGGADGEA
MIAMRYEGYGPGGVAILVDCLSDNKNRTVSEVRHAFSKHGGNLGTDGSVSYLFTNQGEILMASNQPEDKVMEIAIDAGAS
DVAVEDSQIEIITPVEAYHTVLNALQDAALEVEQSHLTMRAQTLVPISDETAESLIKLIDMLEDLDDVQEVYSNAEFSEK
ILESMN

Specific function: Unknown

COG id: COG0217

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TACO1 family [H]

Homologues:

Organism=Homo sapiens, GI27545315, Length=247, Percent_Identity=29.1497975708502, Blast_Score=104, Evalue=8e-23,
Organism=Escherichia coli, GI1788171, Length=247, Percent_Identity=55.4655870445344, Blast_Score=278, Evalue=2e-76,
Organism=Escherichia coli, GI1788294, Length=233, Percent_Identity=39.9141630901288, Blast_Score=154, Evalue=4e-39,
Organism=Caenorhabditis elegans, GI17556100, Length=244, Percent_Identity=26.2295081967213, Blast_Score=82, Evalue=3e-16,
Organism=Saccharomyces cerevisiae, GI6321458, Length=264, Percent_Identity=32.9545454545455, Blast_Score=122, Evalue=4e-29,
Organism=Drosophila melanogaster, GI24583305, Length=249, Percent_Identity=27.3092369477912, Blast_Score=79, Evalue=3e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002876
- InterPro:   IPR017856 [H]

Pfam domain/function: PF01709 DUF28 [H]

EC number: NA

Molecular weight: Translated: 26843; Mature: 26711

Theoretical pI: Translated: 4.67; Mature: 4.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGHSKWANIKFRKGVQDAKRGKIFTKLIREITVAARMGGGDESSNPRLRDAVKKALNAN
CCCCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCC
MKRDTIDNAVKRGVGGADGEAMIAMRYEGYGPGGVAILVDCLSDNKNRTVSEVRHAFSKH
CCHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCHHEEEEHHCCCCCCCHHHHHHHHHHC
GGNLGTDGSVSYLFTNQGEILMASNQPEDKVMEIAIDAGASDVAVEDSQIEIITPVEAYH
CCCCCCCCCEEEEEECCCCEEEECCCCHHHHEEEEEECCCCCEEECCCCEEEECCHHHHH
TVLNALQDAALEVEQSHLTMRAQTLVPISDETAESLIKLIDMLEDLDDVQEVYSNAEFSE
HHHHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
KILESMN
HHHHHCC
>Mature Secondary Structure 
AGHSKWANIKFRKGVQDAKRGKIFTKLIREITVAARMGGGDESSNPRLRDAVKKALNAN
CCCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCC
MKRDTIDNAVKRGVGGADGEAMIAMRYEGYGPGGVAILVDCLSDNKNRTVSEVRHAFSKH
CCHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCHHEEEEHHCCCCCCCHHHHHHHHHHC
GGNLGTDGSVSYLFTNQGEILMASNQPEDKVMEIAIDAGASDVAVEDSQIEIITPVEAYH
CCCCCCCCCEEEEEECCCCEEEECCCCHHHHEEEEEECCCCCEEECCCCEEEECCHHHHH
TVLNALQDAALEVEQSHLTMRAQTLVPISDETAESLIKLIDMLEDLDDVQEVYSNAEFSE
HHHHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
KILESMN
HHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA