Click here to switch to the map view.

The map label for this gene is 54294157

Identifier: 54294157

GI number: 54294157

Start: 1361767

End: 1362330

Strand: Direct

Name: 54294157

Synonym: lpl1221

Alternate gene names: NA

Gene position: 1361767-1362330 (Clockwise)

Preceding gene: 54294156

Following gene: 54294158

Centisome position: 40.7

GC content: 37.41

Gene sequence:

>564_bases
ATGTTAGCGGATTTAATGCTATGTGCTAATTTTTTTATATTTACGGGAGGACCTGGCTCTGGCAAAACTGCCGTATTGAA
TGAGTTAAATACTCGAGGCTATTTAACAGTTTCTGAAGTAGCGCGTTCTATTATTCAAAAACAACAGGCTGATGGTGGTG
ATGCGATACATACTGGAAATAGAAAAGCGTTTCGAGACTTGATGCTTGAACAATCGATTGCAGATTATTGCAAGATGCAG
TCAGAGGAAAAAATTGTATTTTTCGATCGGGGAATCCCGGATTTGTATGGTTACTCCAAAGCATTTTGTGGTGAGGCGAG
TAAGGAAGTGAATGAGGCTGTTAGACAATTTCGTTATAATAAAACAGTCTTTATTTTCCCTCCCTGGCCTGAAATTTATG
AAAATGACGATGAACGTCAACAGGATTATCAAGAAGCGTTGCAAACTTATTATGCTGTAAAAGAGGGGTATTTTGATTGT
GGGTATGTGTTATTAGAGGTTCCCAAATGCCCTATTAAAGACCGGGCTAATTTTATTTTTCAAATGATAAGTAAAAATGG
ATGA

Upstream 100 bases:

>100_bases
CGAAACAGATAAGCTGGATAAAAGCTTAAGAGAATTGATATGAGTACACTAAAAGCTTTGTAATTTAATTTATGAGCAAT
TTTTAAAGGTATGACAGGTT

Downstream 100 bases:

>100_bases
GCCGGTTGGGGTGTTGGCTAATGTAAATCTCCCGTATGTTCTTTTGTCATTCCAATTCCTGAAATAAATTCGTCCAAAAT
TAATATCGCGAAATAACAAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 187; Mature: 187

Protein sequence:

>187_residues
MLADLMLCANFFIFTGGPGSGKTAVLNELNTRGYLTVSEVARSIIQKQQADGGDAIHTGNRKAFRDLMLEQSIADYCKMQ
SEEKIVFFDRGIPDLYGYSKAFCGEASKEVNEAVRQFRYNKTVFIFPPWPEIYENDDERQQDYQEALQTYYAVKEGYFDC
GYVLLEVPKCPIKDRANFIFQMISKNG

Sequences:

>Translated_187_residues
MLADLMLCANFFIFTGGPGSGKTAVLNELNTRGYLTVSEVARSIIQKQQADGGDAIHTGNRKAFRDLMLEQSIADYCKMQ
SEEKIVFFDRGIPDLYGYSKAFCGEASKEVNEAVRQFRYNKTVFIFPPWPEIYENDDERQQDYQEALQTYYAVKEGYFDC
GYVLLEVPKCPIKDRANFIFQMISKNG
>Mature_187_residues
MLADLMLCANFFIFTGGPGSGKTAVLNELNTRGYLTVSEVARSIIQKQQADGGDAIHTGNRKAFRDLMLEQSIADYCKMQ
SEEKIVFFDRGIPDLYGYSKAFCGEASKEVNEAVRQFRYNKTVFIFPPWPEIYENDDERQQDYQEALQTYYAVKEGYFDC
GYVLLEVPKCPIKDRANFIFQMISKNG

Specific function: Unknown

COG id: COG3911

COG function: function code R; Predicted ATPase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21375; Mature: 21375

Theoretical pI: Translated: 4.76; Mature: 4.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLADLMLCANFFIFTGGPGSGKTAVLNELNTRGYLTVSEVARSIIQKQQADGGDAIHTGN
CHHHHHHHHHHHEEECCCCCCCHHHHHHCCCCCCEEHHHHHHHHHHHHCCCCCCEEECCC
RKAFRDLMLEQSIADYCKMQSEEKIVFFDRGIPDLYGYSKAFCGEASKEVNEAVRQFRYN
HHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHCCHHHHHCCHHHHHHHHHHHHHCC
KTVFIFPPWPEIYENDDERQQDYQEALQTYYAVKEGYFDCGYVLLEVPKCPIKDRANFIF
CEEEEECCCHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHCHHEEECCCCCCHHHHHHHH
QMISKNG
HHHHCCC
>Mature Secondary Structure
MLADLMLCANFFIFTGGPGSGKTAVLNELNTRGYLTVSEVARSIIQKQQADGGDAIHTGN
CHHHHHHHHHHHEEECCCCCCCHHHHHHCCCCCCEEHHHHHHHHHHHHCCCCCCEEECCC
RKAFRDLMLEQSIADYCKMQSEEKIVFFDRGIPDLYGYSKAFCGEASKEVNEAVRQFRYN
HHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHCCHHHHHCCHHHHHHHHHHHHHCC
KTVFIFPPWPEIYENDDERQQDYQEALQTYYAVKEGYFDCGYVLLEVPKCPIKDRANFIF
CEEEEECCCHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHCHHEEECCCCCCHHHHHHHH
QMISKNG
HHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA