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The map label for this gene is 54293989

Identifier: 54293989

GI number: 54293989

Start: 1177363

End: 1177659

Strand: Direct

Name: 54293989

Synonym: lpl1048

Alternate gene names: NA

Gene position: 1177363-1177659 (Clockwise)

Preceding gene: 54293987

Following gene: 54293990

Centisome position: 35.19

GC content: 41.08

Gene sequence:

>297_bases
ATGTTAACTCAAGACCAGGTTATCAAGTTAAGTGACATTTTGCATTTAATGGGCGAAGTTAATCGCCTTAAACTTCTTAT
TGAGTGCTTAAAAGGGCCGAAATCGGTTTCGGATCTGGCAGAGCAATTGCAGCTTTCTGTCCCTTTAACCAGCCATCATT
TGAGTCTGTTGCGCTCAGCACGGCTCTTGATGGCTAATCGCGAAGGCAAACACATTTATTACAGTATTTATGATGCGCAT
GTACGCTGTATTTTAGAGGACATGCTTAAACACTTTACTGAAGAGACGGAGAATTAA

Upstream 100 bases:

>100_bases
AGCAGTAATGAGCGGCTTCAGAGCTTATTGTTCTTTGACAATTCCTGCTAATGAGCTATATTAACAGTTAAATACTTATC
TAACTGTTTAATTGTTAATT

Downstream 100 bases:

>100_bases
CATGCGTTTGCTAAAACAAGAGGATTGGGGTCGTTATTCGGTGAGCCATGTTTCGATAGGAATGAATTGCCTGCGATGTC
GAACTTCTCTTGCTCCGGGG

Product: hypothetical protein

Products: NA

Alternate protein names: Transcriptional Regulator; ArsR Family Transcriptional Regulator; Transcriptional Regulator ArsR Family

Number of amino acids: Translated: 98; Mature: 98

Protein sequence:

>98_residues
MLTQDQVIKLSDILHLMGEVNRLKLLIECLKGPKSVSDLAEQLQLSVPLTSHHLSLLRSARLLMANREGKHIYYSIYDAH
VRCILEDMLKHFTEETEN

Sequences:

>Translated_98_residues
MLTQDQVIKLSDILHLMGEVNRLKLLIECLKGPKSVSDLAEQLQLSVPLTSHHLSLLRSARLLMANREGKHIYYSIYDAH
VRCILEDMLKHFTEETEN
>Mature_98_residues
MLTQDQVIKLSDILHLMGEVNRLKLLIECLKGPKSVSDLAEQLQLSVPLTSHHLSLLRSARLLMANREGKHIYYSIYDAH
VRCILEDMLKHFTEETEN

Specific function: Unknown

COG id: COG0640

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11297; Mature: 11297

Theoretical pI: Translated: 6.79; Mature: 6.79

Prosite motif: PS50987 HTH_ARSR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTQDQVIKLSDILHLMGEVNRLKLLIECLKGPKSVSDLAEQLQLSVPLTSHHLSLLRSA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHH
RLLMANREGKHIYYSIYDAHVRCILEDMLKHFTEETEN
HHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLTQDQVIKLSDILHLMGEVNRLKLLIECLKGPKSVSDLAEQLQLSVPLTSHHLSLLRSA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHH
RLLMANREGKHIYYSIYDAHVRCILEDMLKHFTEETEN
HHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA