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The map label for this gene is 54293970

Identifier: 54293970

GI number: 54293970

Start: 1161526

End: 1161888

Strand: Reverse

Name: 54293970

Synonym: lpl1027

Alternate gene names: NA

Gene position: 1161888-1161526 (Counterclockwise)

Preceding gene: 54293971

Following gene: 54293969

Centisome position: 34.73

GC content: 44.63

Gene sequence:

>363_bases
ATGAGTCAGCCTTCTTCGCGCCATCTATCACATGACTTTCCAGCCTGGAAAGGCTTAAGTCTGCGTGAATTGTTTTGGAT
TGTCATCACTACAACACCAGTAACTACCTTGCTTTTTATTCTTTTAGGAACAATGGCAGGGTATCCACTAGCCGCTGGCT
GCATCGGTTTTGTGATTGGATTCATCTTCTCCATTACCGTATGGCCAAAAGGAGTCGCCCGTATCAAAGCAGGCAAACCT
TATGGTTATGTGATGAAGAAAACCATTCAATGGATGGTGCGATTAAGGCTCAAACACTCGCCCTGGATTCATTATCAGGG
GCAGTGGCAAAAGAATAAATCTGTTGGAGAGCCTCATGTTTGA

Upstream 100 bases:

>100_bases
CTTTTGCCGTAATGGGAATCACCTATTTAGCCATTAGCATCGCTTCTGGTTACGTGGGTTACACCATGATTACCAAGTTC
AAAATATAGGAGGTGAAATT

Downstream 100 bases:

>100_bases
ATATTGGAAAAAAATCGACAGCCTACAGCATCATAACCGTTTATTACTGGCTTTTATCGGCCTGTTATCAGCGATCGTTT
TGGCCTTAATCATTAACCTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 120; Mature: 119

Protein sequence:

>120_residues
MSQPSSRHLSHDFPAWKGLSLRELFWIVITTTPVTTLLFILLGTMAGYPLAAGCIGFVIGFIFSITVWPKGVARIKAGKP
YGYVMKKTIQWMVRLRLKHSPWIHYQGQWQKNKSVGEPHV

Sequences:

>Translated_120_residues
MSQPSSRHLSHDFPAWKGLSLRELFWIVITTTPVTTLLFILLGTMAGYPLAAGCIGFVIGFIFSITVWPKGVARIKAGKP
YGYVMKKTIQWMVRLRLKHSPWIHYQGQWQKNKSVGEPHV
>Mature_119_residues
SQPSSRHLSHDFPAWKGLSLRELFWIVITTTPVTTLLFILLGTMAGYPLAAGCIGFVIGFIFSITVWPKGVARIKAGKPY
GYVMKKTIQWMVRLRLKHSPWIHYQGQWQKNKSVGEPHV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13652; Mature: 13521

Theoretical pI: Translated: 10.97; Mature: 10.97

Prosite motif: PS00430 TONB_DEPENDENT_REC_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQPSSRHLSHDFPAWKGLSLRELFWIVITTTPVTTLLFILLGTMAGYPLAAGCIGFVIG
CCCCCCCCCCCCCCCCCCCCHHHHEEEEEECCHHHHHHHHHHHHHCCCCHHHHHHHHHHH
FIFSITVWPKGVARIKAGKPYGYVMKKTIQWMVRLRLKHSPWIHYQGQWQKNKSVGEPHV
HHHHHHCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCC
>Mature Secondary Structure 
SQPSSRHLSHDFPAWKGLSLRELFWIVITTTPVTTLLFILLGTMAGYPLAAGCIGFVIG
CCCCCCCCCCCCCCCCCCCHHHHEEEEEECCHHHHHHHHHHHHHCCCCHHHHHHHHHHH
FIFSITVWPKGVARIKAGKPYGYVMKKTIQWMVRLRLKHSPWIHYQGQWQKNKSVGEPHV
HHHHHHCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA