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The map label for this gene is 54293962

Identifier: 54293962

GI number: 54293962

Start: 1151894

End: 1153447

Strand: Reverse

Name: 54293962

Synonym: lpl1019

Alternate gene names: NA

Gene position: 1153447-1151894 (Counterclockwise)

Preceding gene: 54293963

Following gene: 54293960

Centisome position: 34.48

GC content: 41.89

Gene sequence:

>1554_bases
ATGATTGTCTTTAATCCTTTATCTCTCTATACCACCTATCTTGGTTGGCAACAGTATGAGGTTCTATTTAACGCCCTGTG
GCAAACAGGGCTGTTATATCTTGGTTTTTTGGCCATTGGTTATCGCTTTCTTAAGAACGTGCTTAATCCAGCTGGCGCGT
TCTATGCGGTTGAACATGCTTTAAATAACTTCCTTTATGAATTGGCAGTTACTTTCCTAATATGCAGCTTATTCGTCTAT
CCCTGTGTGCCGCTAGAAACCAAAGCCCTGCAATTTAAACCCTTATGTGGATTGAAGAATCCAACAACTGCGGTAATTGG
CGACAGCGGAACAACTTATGATGAAGCCTTTGCAGATTTACTAACTAACCAGGTCAAGATTCCTATAGGCTTTGCCATCA
TCCAGAACTTCATGTCGAGCTTTACTTACAGTCTCATGAAGGTAACGGGTTGCACCGACAGTTTGCAATCCATTCAAGGC
GATTTGGTATCAACCTATCTGCCACAGAATATTCGCAAACAAGCTCTGGATTTTCATAGACAATGTTTTATTGAAGCAAG
AACGAAATTTAATAGTGAAAAGCATGAAGCCAGTGAATTAGACCCCATGCTGAAGCGCTATGGTGGTGAGGATGATTTAA
ACTGGATGGGTTCTAAAATCCTGCAAAAAATGTATTACAGCAAACTCCATGCACGCCAACCTGTTCCTGGTTTTACATTC
CACCAAGCCCCTAATCGCAATCTTGAAAAAGCGGCCAACCGTGGCGATATTCCACCAGAACAACTGCCAGAAGACGGTTA
TCCCAGCTGTCAACAATGGTGGCATAAGATCAAAGCAGATTTGGTTGATGTTTCTAACCAAGCCAGTGTTTTTAATAAGC
ACCTAAATTACTACGCCATGCTAGATAGGGTTCGTAAGTATAAAATGAAACATCCTAAAGCCTGGAAAGCAGACATCAGC
GCAGAAGATTTTATTGCCAAGATGCTCTTGCAAGAAAGCAAAGATATGCAGGCAAGCTCAGTACAAAATCTCATGGACAA
TAACAATGGAAAGGTCGCATCCGCGATTACCCATAGCTTGGTCAATGTCGGACAATGGACAAAATCATGGACATCTACCC
CATTAAAAAGAGAAGCCATCATGCAAACCTTACCTGTAATGCAGGCGTTTTTCATGTTCTTTTTAATCATTCTCACCCCA
ATGGTTTTGTCTTTGAGCTGCTACAGCACCAGAGCATTAGGCAGCCTGTGCGCCTTATTTGTCATGGCTATTTTTCTTCA
ATACCTCTGGCATTTAGTTGGATTTCTTGAACGTTCAGTACTTGATCCATTAGGTGAAAACGATGCGATTTCTGCCATGA
AAAATATGGCTGTGATGTTTTACTTTGTCGCACCAGTTTTATTGCTGAGATTATCAAGTCATTTTGGCGGTGACGCTGGG
GCTGGTCTTATGGATTTGGTTAATGGTTCGGATAGGCAGAGCGAAAGCATGGCTCAATCCGGTATGCACGTAGCCAAGAC
AGGAGTAAAAATTATTGCAAAAGGAATTCGATGA

Upstream 100 bases:

>100_bases
GACATCAAGCACAAAGCCAAAACATCCCAGGCCAGGATCACGAACAACCTGCTGTTAAAAACGGTGCAATCTATGTTAAA
GAAAATAAAGGAGCTTAATC

Downstream 100 bases:

>100_bases
ATATGTTAAAGCACATCCTTACTTTCAAAGGCTTCATTGTATTCACGAATAGTGATCAAGCCATTATCAAGTTTATCTTG
AGCCTCATAAACAGACATGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 517; Mature: 517

Protein sequence:

>517_residues
MIVFNPLSLYTTYLGWQQYEVLFNALWQTGLLYLGFLAIGYRFLKNVLNPAGAFYAVEHALNNFLYELAVTFLICSLFVY
PCVPLETKALQFKPLCGLKNPTTAVIGDSGTTYDEAFADLLTNQVKIPIGFAIIQNFMSSFTYSLMKVTGCTDSLQSIQG
DLVSTYLPQNIRKQALDFHRQCFIEARTKFNSEKHEASELDPMLKRYGGEDDLNWMGSKILQKMYYSKLHARQPVPGFTF
HQAPNRNLEKAANRGDIPPEQLPEDGYPSCQQWWHKIKADLVDVSNQASVFNKHLNYYAMLDRVRKYKMKHPKAWKADIS
AEDFIAKMLLQESKDMQASSVQNLMDNNNGKVASAITHSLVNVGQWTKSWTSTPLKREAIMQTLPVMQAFFMFFLIILTP
MVLSLSCYSTRALGSLCALFVMAIFLQYLWHLVGFLERSVLDPLGENDAISAMKNMAVMFYFVAPVLLLRLSSHFGGDAG
AGLMDLVNGSDRQSESMAQSGMHVAKTGVKIIAKGIR

Sequences:

>Translated_517_residues
MIVFNPLSLYTTYLGWQQYEVLFNALWQTGLLYLGFLAIGYRFLKNVLNPAGAFYAVEHALNNFLYELAVTFLICSLFVY
PCVPLETKALQFKPLCGLKNPTTAVIGDSGTTYDEAFADLLTNQVKIPIGFAIIQNFMSSFTYSLMKVTGCTDSLQSIQG
DLVSTYLPQNIRKQALDFHRQCFIEARTKFNSEKHEASELDPMLKRYGGEDDLNWMGSKILQKMYYSKLHARQPVPGFTF
HQAPNRNLEKAANRGDIPPEQLPEDGYPSCQQWWHKIKADLVDVSNQASVFNKHLNYYAMLDRVRKYKMKHPKAWKADIS
AEDFIAKMLLQESKDMQASSVQNLMDNNNGKVASAITHSLVNVGQWTKSWTSTPLKREAIMQTLPVMQAFFMFFLIILTP
MVLSLSCYSTRALGSLCALFVMAIFLQYLWHLVGFLERSVLDPLGENDAISAMKNMAVMFYFVAPVLLLRLSSHFGGDAG
AGLMDLVNGSDRQSESMAQSGMHVAKTGVKIIAKGIR
>Mature_517_residues
MIVFNPLSLYTTYLGWQQYEVLFNALWQTGLLYLGFLAIGYRFLKNVLNPAGAFYAVEHALNNFLYELAVTFLICSLFVY
PCVPLETKALQFKPLCGLKNPTTAVIGDSGTTYDEAFADLLTNQVKIPIGFAIIQNFMSSFTYSLMKVTGCTDSLQSIQG
DLVSTYLPQNIRKQALDFHRQCFIEARTKFNSEKHEASELDPMLKRYGGEDDLNWMGSKILQKMYYSKLHARQPVPGFTF
HQAPNRNLEKAANRGDIPPEQLPEDGYPSCQQWWHKIKADLVDVSNQASVFNKHLNYYAMLDRVRKYKMKHPKAWKADIS
AEDFIAKMLLQESKDMQASSVQNLMDNNNGKVASAITHSLVNVGQWTKSWTSTPLKREAIMQTLPVMQAFFMFFLIILTP
MVLSLSCYSTRALGSLCALFVMAIFLQYLWHLVGFLERSVLDPLGENDAISAMKNMAVMFYFVAPVLLLRLSSHFGGDAG
AGLMDLVNGSDRQSESMAQSGMHVAKTGVKIIAKGIR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 58276; Mature: 58276

Theoretical pI: Translated: 8.50; Mature: 8.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCHHHHHCCCCCHHHHHHHCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure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CCHHHHHCCCCCHHHHHHHCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA