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The map label for this gene is 54293885

Identifier: 54293885

GI number: 54293885

Start: 1053552

End: 1053959

Strand: Direct

Name: 54293885

Synonym: lpl0941

Alternate gene names: NA

Gene position: 1053552-1053959 (Clockwise)

Preceding gene: 54293881

Following gene: 54293886

Centisome position: 31.49

GC content: 36.76

Gene sequence:

>408_bases
ATGAGACCTTGTTATTTTGTTTGTATATTGGCTTTATTTGTGTTTGCGATGCCAGGGTACTCTGAGAATCATCATCCTCA
AGAGTTTCTAAAGTCAATTGCTGGCACAAAAGATGAAGGGGAAAAAATTTTTAATCATTTTTGTGTTAATTGCCATGGAA
CGAAACCAATGATTTCTTTAGGAGCCCCTGAAATTGGAAATGAAAAAGCATGGGGAGTAAGATTGAAGCAAGGAATGGAA
GTGCTTTTTAAACACACCGATGAAGGGTTTAATGCCATGCCTCCCAGAGGAGGATGCTTTGAATGTACTGATAAACAGCT
GATTCTAGCTATTATTGCAATGGTTCCCAAACAGGCTCAAAAAGGACTATTAAACAATCTATTGGATCATAAAGAATACA
AACAGTAA

Upstream 100 bases:

>100_bases
ATGCACTTTTTCACGACATAAACTCCCTTAGTCTATTGATTTTTTATATTGAAACGCACTGTGTCCCAAGCAAGTATTGC
GCCAATTTTAGGAGTATATC

Downstream 100 bases:

>100_bases
AAAATTTTTATAAAAAAGCCTAAACTTATTCAAACTGCTCCCGATATAGTTAAAAAGAGAAAGAGGGAGATAGAAAGTGA
AAAAGCAAATACTGTTAGTT

Product: hypothetical protein

Products: NA

Alternate protein names: Cytochrome C-Type Protein; Cytochrome C Family Protein; Cytochrome C

Number of amino acids: Translated: 135; Mature: 135

Protein sequence:

>135_residues
MRPCYFVCILALFVFAMPGYSENHHPQEFLKSIAGTKDEGEKIFNHFCVNCHGTKPMISLGAPEIGNEKAWGVRLKQGME
VLFKHTDEGFNAMPPRGGCFECTDKQLILAIIAMVPKQAQKGLLNNLLDHKEYKQ

Sequences:

>Translated_135_residues
MRPCYFVCILALFVFAMPGYSENHHPQEFLKSIAGTKDEGEKIFNHFCVNCHGTKPMISLGAPEIGNEKAWGVRLKQGME
VLFKHTDEGFNAMPPRGGCFECTDKQLILAIIAMVPKQAQKGLLNNLLDHKEYKQ
>Mature_135_residues
MRPCYFVCILALFVFAMPGYSENHHPQEFLKSIAGTKDEGEKIFNHFCVNCHGTKPMISLGAPEIGNEKAWGVRLKQGME
VLFKHTDEGFNAMPPRGGCFECTDKQLILAIIAMVPKQAQKGLLNNLLDHKEYKQ

Specific function: Unknown

COG id: COG3245

COG function: function code C; Cytochrome c5

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15198; Mature: 15198

Theoretical pI: Translated: 7.84; Mature: 7.84

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.4 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
8.9 %Cys+Met (Translated Protein)
4.4 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
8.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRPCYFVCILALFVFAMPGYSENHHPQEFLKSIAGTKDEGEKIFNHFCVNCHGTKPMISL
CCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCEEEC
GAPEIGNEKAWGVRLKQGMEVLFKHTDEGFNAMPPRGGCFECTDKQLILAIIAMVPKQAQ
CCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
KGLLNNLLDHKEYKQ
HHHHHHHHHHHHCCC
>Mature Secondary Structure
MRPCYFVCILALFVFAMPGYSENHHPQEFLKSIAGTKDEGEKIFNHFCVNCHGTKPMISL
CCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCEEEC
GAPEIGNEKAWGVRLKQGMEVLFKHTDEGFNAMPPRGGCFECTDKQLILAIIAMVPKQAQ
CCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
KGLLNNLLDHKEYKQ
HHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA