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The map label for this gene is fas5 [H]

Identifier: 54293869

GI number: 54293869

Start: 1039090

End: 1040460

Strand: Direct

Name: fas5 [H]

Synonym: lpl0925

Alternate gene names: 54293869

Gene position: 1039090-1040460 (Clockwise)

Preceding gene: 54293868

Following gene: 54293870

Centisome position: 31.06

GC content: 39.46

Gene sequence:

>1371_bases
ATGTCGCAAAATCAGTGGAGCTTAGAGAAAATCAAGCAGTATAAGGAAGATACCGGACAAGCATTGCTCAGTGATGAGCA
ATCGCTTGTTTTATTTGGTCAGGATTTTGGCAAGCTCATTCAATCACAGCCGGTAGCTGTGTCCGCCCCTCAAAGCATAG
AGTCATTGCAATCATTAATTCTATTCGCCAATCAATATCACTTACCAGTAACTATTCGTGGTAATGGTTTAAGTCAAGGC
GGCCAATCATTGCCTGTTCCTGGAGGACTAACAATTTCTATGCAGTCTTTCAACAAGCCACTTGATTTGAGTGAAGATTT
CATCTGGGTTGAGGCCAATACCAGTTGGAAGAATCTGCTTGAAAAATCACTACTGAACAATAAAGCCCCCTATGTGCTGC
CTTATAACTGTAATTTGTCGGTTGGGGGTGTTTTATCTGCAGGAGGAATAGGGGCTTCCTCTTTTAAATACGGTGTTATT
AATGCTTATGTTTCAGCATTGGAAGTGGTTGATGGTTTGGGGAGAAAGCAAATCGTTGAAAAAAACTCACCTCTATTTCA
AGCCTGCCTTTCAGGGCAAGGTCGATTTGGTGTCATTACCAAAGCATGTATTCAGCTACGATCAGTTCAGCCACGCGTCA
AAACTTTCTTTCTGGTTTATGCTGATCAGAATCAATGGTTTGAAGATATTTATAAAATACAGGGTAAAGTCGATTATATG
GAGATATTTTGTTCTCCTTCAATTCAGGGCGCTCGATTGAAAGAAGATAAACGTATTCCTATGGCTTATTGGTTGTATGG
TTTGCACCTTTCTGTTGAATATGATCGGCATGCGGAAAATATTTTAGGGCAGTTAAAGCCATGGAATGTCCTGAATATAC
AGGACGAGAGTACTTTATCTTATTTTTTAAGGCATAACTCTCGCTTTGATATGATGAAGTTGACAGGGCAATGGGATTTG
TTACATCCTTGGTATGAATGTTTTGTTCCTACCTCATTTTTAACTGGAGTACTTTCCCAGCTGTTAGAGGAATTACCGCT
TCACTATGCCAGTTTGGTTCATGTTGTTCCAATTGCCAAGCAAAAAGCCGGGTTTATGATGTTACCAGACTGCGATTCAA
TTTGTGAATTTATGATTTTAAATCCAGGGGTACCTTATTCCCTAGAGGAAAGTTGCCTGAAGGCTATTGAGAATCTCGAC
AAGCACTTGCTGCAAAATAATGGTAAACGCTATTTATCAGGATTCTTAGGTACAGAATTACCAGACAACTATTGGCTAAA
GCATTTTGGAGAAAAATACGACTCATGGGTAGGTTTGAAAAAACAGTATGATCCCGCAGGGATTTTTTCATCAATGTTAC
ATCATATATAA

Upstream 100 bases:

>100_bases
AGGATGGTAGATCGTTGCTATGATGCATTCAGCAAGATGTTTGATGGATTGATTCTTGCTTGCAATAAACGATTAGAATT
GGCAAAAGAAAGGAATCAAC

Downstream 100 bases:

>100_bases
AAAATAGTATTGTGCAAACTCATGCTTCGTAACAGATATCAAGGCATGGTGGTCTATCTGATGCATAAAGGTATGAATTC
AGCCTGGATAAAGATATATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 456; Mature: 455

Protein sequence:

>456_residues
MSQNQWSLEKIKQYKEDTGQALLSDEQSLVLFGQDFGKLIQSQPVAVSAPQSIESLQSLILFANQYHLPVTIRGNGLSQG
GQSLPVPGGLTISMQSFNKPLDLSEDFIWVEANTSWKNLLEKSLLNNKAPYVLPYNCNLSVGGVLSAGGIGASSFKYGVI
NAYVSALEVVDGLGRKQIVEKNSPLFQACLSGQGRFGVITKACIQLRSVQPRVKTFFLVYADQNQWFEDIYKIQGKVDYM
EIFCSPSIQGARLKEDKRIPMAYWLYGLHLSVEYDRHAENILGQLKPWNVLNIQDESTLSYFLRHNSRFDMMKLTGQWDL
LHPWYECFVPTSFLTGVLSQLLEELPLHYASLVHVVPIAKQKAGFMMLPDCDSICEFMILNPGVPYSLEESCLKAIENLD
KHLLQNNGKRYLSGFLGTELPDNYWLKHFGEKYDSWVGLKKQYDPAGIFSSMLHHI

Sequences:

>Translated_456_residues
MSQNQWSLEKIKQYKEDTGQALLSDEQSLVLFGQDFGKLIQSQPVAVSAPQSIESLQSLILFANQYHLPVTIRGNGLSQG
GQSLPVPGGLTISMQSFNKPLDLSEDFIWVEANTSWKNLLEKSLLNNKAPYVLPYNCNLSVGGVLSAGGIGASSFKYGVI
NAYVSALEVVDGLGRKQIVEKNSPLFQACLSGQGRFGVITKACIQLRSVQPRVKTFFLVYADQNQWFEDIYKIQGKVDYM
EIFCSPSIQGARLKEDKRIPMAYWLYGLHLSVEYDRHAENILGQLKPWNVLNIQDESTLSYFLRHNSRFDMMKLTGQWDL
LHPWYECFVPTSFLTGVLSQLLEELPLHYASLVHVVPIAKQKAGFMMLPDCDSICEFMILNPGVPYSLEESCLKAIENLD
KHLLQNNGKRYLSGFLGTELPDNYWLKHFGEKYDSWVGLKKQYDPAGIFSSMLHHI
>Mature_455_residues
SQNQWSLEKIKQYKEDTGQALLSDEQSLVLFGQDFGKLIQSQPVAVSAPQSIESLQSLILFANQYHLPVTIRGNGLSQGG
QSLPVPGGLTISMQSFNKPLDLSEDFIWVEANTSWKNLLEKSLLNNKAPYVLPYNCNLSVGGVLSAGGIGASSFKYGVIN
AYVSALEVVDGLGRKQIVEKNSPLFQACLSGQGRFGVITKACIQLRSVQPRVKTFFLVYADQNQWFEDIYKIQGKVDYME
IFCSPSIQGARLKEDKRIPMAYWLYGLHLSVEYDRHAENILGQLKPWNVLNIQDESTLSYFLRHNSRFDMMKLTGQWDLL
HPWYECFVPTSFLTGVLSQLLEELPLHYASLVHVVPIAKQKAGFMMLPDCDSICEFMILNPGVPYSLEESCLKAIENLDK
HLLQNNGKRYLSGFLGTELPDNYWLKHFGEKYDSWVGLKKQYDPAGIFSSMLHHI

Specific function: The FAS-operon encodes genes involved in cytokinin production and in host plant fasciation (leafy gall) [H]

COG id: COG0277

COG function: function code C; FAD/FMN-containing dehydrogenases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FAD-binding PCMH-type domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015345
- InterPro:   IPR016166
- InterPro:   IPR016167
- InterPro:   IPR016164
- InterPro:   IPR016168
- InterPro:   IPR006094
- InterPro:   IPR006093 [H]

Pfam domain/function: PF09265 Cytokin-bind; PF01565 FAD_binding_4 [H]

EC number: NA

Molecular weight: Translated: 51501; Mature: 51370

Theoretical pI: Translated: 6.58; Mature: 6.58

Prosite motif: PS00216 SUGAR_TRANSPORT_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQNQWSLEKIKQYKEDTGQALLSDEQSLVLFGQDFGKLIQSQPVAVSAPQSIESLQSLI
CCCCCHHHHHHHHHHHHHCHHHHCCCCEEEEECCHHHHHHHCCCCEEECCHHHHHHHHHH
LFANQYHLPVTIRGNGLSQGGQSLPVPGGLTISMQSFNKPLDLSEDFIWVEANTSWKNLL
HHHCCEEEEEEEECCCCCCCCCCCCCCCCCEEEHHHCCCCCCCCCCEEEEECCCHHHHHH
EKSLLNNKAPYVLPYNCNLSVGGVLSAGGIGASSFKYGVINAYVSALEVVDGLGRKQIVE
HHHHHCCCCCEEEEECCCCEECCEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHH
KNSPLFQACLSGQGRFGVITKACIQLRSVQPRVKTFFLVYADQNQWFEDIYKIQGKVDYM
CCCHHHHHHHCCCCCCHHHHHHHHHHHCCCCCEEEEEEEEECCCHHHHHHHHHCCCCEEE
EIFCSPSIQGARLKEDKRIPMAYWLYGLHLSVEYDRHAENILGQLKPWNVLNIQDESTLS
EEEECCCCCCCCCCCCCCCCCEEEEEEEEEEEEECHHHHHHHHCCCCCEEEECCCHHHHH
YFLRHNSRFDMMKLTGQWDLLHPWYECFVPTSFLTGVLSQLLEELPLHYASLVHVVPIAK
HHHHCCCCCCEEEECCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHH
QKAGFMMLPDCDSICEFMILNPGVPYSLEESCLKAIENLDKHLLQNNGKRYLSGFLGTEL
CCCCEEECCCHHHHHHHEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCC
PDNYWLKHFGEKYDSWVGLKKQYDPAGIFSSMLHHI
CCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCC
>Mature Secondary Structure 
SQNQWSLEKIKQYKEDTGQALLSDEQSLVLFGQDFGKLIQSQPVAVSAPQSIESLQSLI
CCCCHHHHHHHHHHHHHCHHHHCCCCEEEEECCHHHHHHHCCCCEEECCHHHHHHHHHH
LFANQYHLPVTIRGNGLSQGGQSLPVPGGLTISMQSFNKPLDLSEDFIWVEANTSWKNLL
HHHCCEEEEEEEECCCCCCCCCCCCCCCCCEEEHHHCCCCCCCCCCEEEEECCCHHHHHH
EKSLLNNKAPYVLPYNCNLSVGGVLSAGGIGASSFKYGVINAYVSALEVVDGLGRKQIVE
HHHHHCCCCCEEEEECCCCEECCEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHH
KNSPLFQACLSGQGRFGVITKACIQLRSVQPRVKTFFLVYADQNQWFEDIYKIQGKVDYM
CCCHHHHHHHCCCCCCHHHHHHHHHHHCCCCCEEEEEEEEECCCHHHHHHHHHCCCCEEE
EIFCSPSIQGARLKEDKRIPMAYWLYGLHLSVEYDRHAENILGQLKPWNVLNIQDESTLS
EEEECCCCCCCCCCCCCCCCCEEEEEEEEEEEEECHHHHHHHHCCCCCEEEECCCHHHHH
YFLRHNSRFDMMKLTGQWDLLHPWYECFVPTSFLTGVLSQLLEELPLHYASLVHVVPIAK
HHHHCCCCCCEEEECCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHH
QKAGFMMLPDCDSICEFMILNPGVPYSLEESCLKAIENLDKHLLQNNGKRYLSGFLGTEL
CCCCEEECCCHHHHHHHEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCC
PDNYWLKHFGEKYDSWVGLKKQYDPAGIFSSMLHHI
CCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8169198 [H]