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The map label for this gene is 54293616

Identifier: 54293616

GI number: 54293616

Start: 723719

End: 724297

Strand: Reverse

Name: 54293616

Synonym: lpl0669

Alternate gene names: NA

Gene position: 724297-723719 (Counterclockwise)

Preceding gene: 54293617

Following gene: 54293615

Centisome position: 21.65

GC content: 45.6

Gene sequence:

>579_bases
ATATACAATGATCTTTGTAAAGACGGCTTCGATACTGAGGTCCCTCTTAACAGCAACCCTCTTTCCATAGCCGGATTCAC
ACTGGTTGAATTATTAGTAACCCTATCTGTTTTTGCCATCATCTTAACTCTAATCGTCCCTTCATTAAGAACTATGATTT
TGAATAACCGTTTGACTTCAAACATTGACTCACTGGTAAGTTCATTAAACTATGCGCGTGGAGTGGCACTTGATCGGGCA
GTCAATGTGGCAGTATGTCCATTAGGTTCGCCAGGTTCAACGGCCTGTGGAGCCAACTGGAGCTCAGGATGGATAGTAGT
GACCCAACCAGTAGCAGGGGCACCAACGCTTTTAAAATCGCACCAGACTTCAGTGAATGATCCTGTTATCACTTCGAACG
TATCCAGTGTTGTTTTTGACCCACATGGGTTATCAACGACCCAAAGCAACTTCACTATGTGTGATAACAGAGGCAATGCG
TTTGCTCGCTCGGCAATGGTTTTGGCCACTGGATTTGTCCAATCCGGAACAACACCCGGCCAGGCAGTCTGGAATAATGG
AGCTCTGAACTGCCCTTAA

Upstream 100 bases:

>100_bases
GTTCACTCTGCGCAACATAACTAATATGTTATTTTGCGTTAAGAGTAGTGTATTGCCCGCACAATCTAATATAGCACAAA
AGATACAAAAAAAAGGCATA

Downstream 100 bases:

>100_bases
CGGAGATAGAATATGATTAACCGAATGGATACATTAGCAAAAGACAAGGGAATGACTTTGCTGGAAGTGTTGATATCTGT
AGTCATATTAGCCGTTGGCA

Product: hypothetical protein

Products: NA

Alternate protein names: Type-4 Fimbrial Pilin Related Signal Peptide Protein; Methylation Site Containing Protein; Type IV Prepilin; Prokaryotic N-Terminal Methylation Motif Domain Protein; Fimbrial Pilin Related Signal Peptide Protein; Type IV Pre-Pilin; Type IV Fimbrial Fimt-Related Pilin; Tfp Pilus Assembly Protein FimT; Methylation; Pre-Pilin Like Leader Sequence

Number of amino acids: Translated: 192; Mature: 192

Protein sequence:

>192_residues
MYNDLCKDGFDTEVPLNSNPLSIAGFTLVELLVTLSVFAIILTLIVPSLRTMILNNRLTSNIDSLVSSLNYARGVALDRA
VNVAVCPLGSPGSTACGANWSSGWIVVTQPVAGAPTLLKSHQTSVNDPVITSNVSSVVFDPHGLSTTQSNFTMCDNRGNA
FARSAMVLATGFVQSGTTPGQAVWNNGALNCP

Sequences:

>Translated_192_residues
MYNDLCKDGFDTEVPLNSNPLSIAGFTLVELLVTLSVFAIILTLIVPSLRTMILNNRLTSNIDSLVSSLNYARGVALDRA
VNVAVCPLGSPGSTACGANWSSGWIVVTQPVAGAPTLLKSHQTSVNDPVITSNVSSVVFDPHGLSTTQSNFTMCDNRGNA
FARSAMVLATGFVQSGTTPGQAVWNNGALNCP
>Mature_192_residues
MYNDLCKDGFDTEVPLNSNPLSIAGFTLVELLVTLSVFAIILTLIVPSLRTMILNNRLTSNIDSLVSSLNYARGVALDRA
VNVAVCPLGSPGSTACGANWSSGWIVVTQPVAGAPTLLKSHQTSVNDPVITSNVSSVVFDPHGLSTTQSNFTMCDNRGNA
FARSAMVLATGFVQSGTTPGQAVWNNGALNCP

Specific function: Unknown

COG id: COG4970

COG function: function code NU; Tfp pilus assembly protein FimT

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20116; Mature: 20116

Theoretical pI: Translated: 5.60; Mature: 5.60

Prosite motif: PS00409 PROKAR_NTER_METHYL

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYNDLCKDGFDTEVPLNSNPLSIAGFTLVELLVTLSVFAIILTLIVPSLRTMILNNRLTS
CCCCHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHH
NIDSLVSSLNYARGVALDRAVNVAVCPLGSPGSTACGANWSSGWIVVTQPVAGAPTLLKS
HHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHC
HQTSVNDPVITSNVSSVVFDPHGLSTTQSNFTMCDNRGNAFARSAMVLATGFVQSGTTPG
CCCCCCCCEEECCCCEEEECCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHCCCCCC
QAVWNNGALNCP
HHHCCCCCCCCC
>Mature Secondary Structure
MYNDLCKDGFDTEVPLNSNPLSIAGFTLVELLVTLSVFAIILTLIVPSLRTMILNNRLTS
CCCCHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHH
NIDSLVSSLNYARGVALDRAVNVAVCPLGSPGSTACGANWSSGWIVVTQPVAGAPTLLKS
HHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHC
HQTSVNDPVITSNVSSVVFDPHGLSTTQSNFTMCDNRGNAFARSAMVLATGFVQSGTTPG
CCCCCCCCEEECCCCEEEECCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHCCCCCC
QAVWNNGALNCP
HHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA