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The map label for this gene is 54293514

Identifier: 54293514

GI number: 54293514

Start: 609531

End: 609803

Strand: Reverse

Name: 54293514

Synonym: lpl0564

Alternate gene names: NA

Gene position: 609803-609531 (Counterclockwise)

Preceding gene: 54293515

Following gene: 54293513

Centisome position: 18.23

GC content: 43.22

Gene sequence:

>273_bases
ATGGTGCCTTTCGCGGGAGAGGGTTGGGGAGAGGGAATGTCACGGATGGTCATTGATGACGAGATATGGTCTCGTTTAGA
AAAATTACTTCCACAGCCTAAAGGTCGTCATGGTGAAGATGATCGCTTATTTATGGAAGCGATATGCTGGATGCTTCGTA
CTGGTGCTGCATGGCGAGATTTGCCTCCAGACTATGGTAACTGGAAAAGTGTTTATAATCGTTATAACAACTGGTCAAAA
AAGGTTATATTACCGCAATATTGGGAGAATTAA

Upstream 100 bases:

>100_bases
CTGAAGTTTTTTTAGACAAGATTTAATCATGAATTGAGCTCGGATTTTCAACTTCACCAGGATCTTCCCCCTCTCCCGCG
CCAGGAGCTTTGATAGTAGG

Downstream 100 bases:

>100_bases
AAAAAAGATGGAGATCACGAATGGCATATGCTTGATGGTTCGATTATAAAAGTACATCAAGATGCAATGAGGAGTAACTA
CGACAAAGCTGCAGAAGCTA

Product: hypothetical protein

Products: NA

Alternate protein names: Transposase And Inactivated Derivative; ISSod6 Transposase; ISRin4 Transposase OrfA; IS5 Family Transposase OrfA; Transposase Of Unassigned Insertion Sequence; Transposase-Related Protein; IS4 Family Transposase; Transposase Related Protein; Transposase-Like Protein; Insertion Sequence Transposase Protein; Transposase IS5 Family Protein; Transposase Protein

Number of amino acids: Translated: 90; Mature: 90

Protein sequence:

>90_residues
MVPFAGEGWGEGMSRMVIDDEIWSRLEKLLPQPKGRHGEDDRLFMEAICWMLRTGAAWRDLPPDYGNWKSVYNRYNNWSK
KVILPQYWEN

Sequences:

>Translated_90_residues
MVPFAGEGWGEGMSRMVIDDEIWSRLEKLLPQPKGRHGEDDRLFMEAICWMLRTGAAWRDLPPDYGNWKSVYNRYNNWSK
KVILPQYWEN
>Mature_90_residues
MVPFAGEGWGEGMSRMVIDDEIWSRLEKLLPQPKGRHGEDDRLFMEAICWMLRTGAAWRDLPPDYGNWKSVYNRYNNWSK
KVILPQYWEN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10734; Mature: 10734

Theoretical pI: Translated: 5.86; Mature: 5.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
5.6 %Met     (Translated Protein)
6.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
5.6 %Met     (Mature Protein)
6.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVPFAGEGWGEGMSRMVIDDEIWSRLEKLLPQPKGRHGEDDRLFMEAICWMLRTGAAWRD
CCCCCCCCCCCCCHHHEECHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCC
LPPDYGNWKSVYNRYNNWSKKVILPQYWEN
CCCCCCCHHHHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure
MVPFAGEGWGEGMSRMVIDDEIWSRLEKLLPQPKGRHGEDDRLFMEAICWMLRTGAAWRD
CCCCCCCCCCCCCHHHEECHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCC
LPPDYGNWKSVYNRYNNWSKKVILPQYWEN
CCCCCCCHHHHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA