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The map label for this gene is 54293513

Identifier: 54293513

GI number: 54293513

Start: 609024

End: 609503

Strand: Reverse

Name: 54293513

Synonym: lpl0563

Alternate gene names: NA

Gene position: 609503-609024 (Counterclockwise)

Preceding gene: 54293514

Following gene: 54293511

Centisome position: 18.22

GC content: 40.83

Gene sequence:

>480_bases
ATGCTTGATGGTTCGATTATAAAAGTACATCAAGATGCAATGAGGAGTAACTACGACAAAGCTGCAGAAGCTATTGGCTC
TAGTGTTGGGGGGCTTAGCACTAAAATTCATGCCAAGGTTGACTCATTTGGACAGCTCGTCAATATACTTGTAACACCTG
GACAGGCGCATGAGAGCCAAGTTGCTTATGATGTATGGGCCAAGGAGTATTGTGAGTTTTTTTTGGCTGATAAAGCTTAC
GATATTGATGGTTTTCGTCACGCTCTAGCGGAAGATGGGATAAAGCCAGTTATCCCAAGCAAAAAGAACCGCCTGAATCC
AACGACCCATGATCGCCATATCTACAAAGAAAGAAATATTGTTGAGCGCTTTTTTCAGAAGATTAAGCGCTTTAGAAGGA
TTGCTACAAGATATGATAAAACAGCCAGGATGTACCTCACTGGTGTCATGTTTGTAAGTATAATATTGGCTTTAAAATAG

Upstream 100 bases:

>100_bases
CTGGAAAAGTGTTTATAATCGTTATAACAACTGGTCAAAAAAGGTTATATTACCGCAATATTGGGAGAATTAAAAAAAAG
ATGGAGATCACGAATGGCAT

Downstream 100 bases:

>100_bases
CGCAGATGTGATGACTTCGAGAACAGATGGCGTTTGCTGAAAAACGTCGTTATTCCAAAAACGCAACACCTTAAACCCAT
GTGTCATTAACCAATCGCTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 159; Mature: 159

Protein sequence:

>159_residues
MLDGSIIKVHQDAMRSNYDKAAEAIGSSVGGLSTKIHAKVDSFGQLVNILVTPGQAHESQVAYDVWAKEYCEFFLADKAY
DIDGFRHALAEDGIKPVIPSKKNRLNPTTHDRHIYKERNIVERFFQKIKRFRRIATRYDKTARMYLTGVMFVSIILALK

Sequences:

>Translated_159_residues
MLDGSIIKVHQDAMRSNYDKAAEAIGSSVGGLSTKIHAKVDSFGQLVNILVTPGQAHESQVAYDVWAKEYCEFFLADKAY
DIDGFRHALAEDGIKPVIPSKKNRLNPTTHDRHIYKERNIVERFFQKIKRFRRIATRYDKTARMYLTGVMFVSIILALK
>Mature_159_residues
MLDGSIIKVHQDAMRSNYDKAAEAIGSSVGGLSTKIHAKVDSFGQLVNILVTPGQAHESQVAYDVWAKEYCEFFLADKAY
DIDGFRHALAEDGIKPVIPSKKNRLNPTTHDRHIYKERNIVERFFQKIKRFRRIATRYDKTARMYLTGVMFVSIILALK

Specific function: Involved in the transposition of the insertion sequence [H]

COG id: COG3293

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase 11 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002559 [H]

Pfam domain/function: PF01609 Transposase_11 [H]

EC number: NA

Molecular weight: Translated: 18134; Mature: 18134

Theoretical pI: Translated: 10.00; Mature: 10.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLDGSIIKVHQDAMRSNYDKAAEAIGSSVGGLSTKIHAKVDSFGQLVNILVTPGQAHESQ
CCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHH
VAYDVWAKEYCEFFLADKAYDIDGFRHALAEDGIKPVIPSKKNRLNPTTHDRHIYKERNI
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
VERFFQKIKRFRRIATRYDKTARMYLTGVMFVSIILALK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLDGSIIKVHQDAMRSNYDKAAEAIGSSVGGLSTKIHAKVDSFGQLVNILVTPGQAHESQ
CCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHH
VAYDVWAKEYCEFFLADKAYDIDGFRHALAEDGIKPVIPSKKNRLNPTTHDRHIYKERNI
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
VERFFQKIKRFRRIATRYDKTARMYLTGVMFVSIILALK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8126444 [H]