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The map label for this gene is 54293430

Identifier: 54293430

GI number: 54293430

Start: 520626

End: 521426

Strand: Reverse

Name: 54293430

Synonym: lpl0479

Alternate gene names: NA

Gene position: 521426-520626 (Counterclockwise)

Preceding gene: 54293432

Following gene: 54293428

Centisome position: 15.59

GC content: 36.45

Gene sequence:

>801_bases
ATGGGTAGAAGTGAAATGAAAATAGCATCAGCTGAATTGCGTAATTTGATGAAGGCAGTATCTGAAGGTCATTATGAAAC
TGTCAATACTATACTGGATAAAGATCCTGAGCTTGTAAATCAGTATGTCCCCCCAACTTATGATTCACCCCTGGCTAGAG
TATTAAATAAAAAACACATCGACTACAAAATGCTTGATATTTTGGTTAAACACCATGTTGATTTTGATTATCCCATCAAC
CATCAAAAAGAGACACCAATTGAATTGGCCTGTAAAAATCAGGATCTTCAATTATTCAAGTACTTAGTCCAACACAATGC
CCCCATTTCAGAACAAGCACCACATTTCCTGCTAGTGAATAGCACCAATATCAAATACCTGACTGAAGATAAAATTAAAA
ACACCTGTGAAATTATCAAATTAATGGGTGGTTTGGATGCTGTTTCTTCTAAATGTGATGCTGAAGGTAATCGCTTCGGA
GAACAGGCAAGGAAATCACAATTAATCAATCGATTCGGTGGTATAGTAAAGTACGATTACATGCAATTGCTGCAATCAGT
TTATCAAATTGTTGATAGAGAAGTAGATGCTCCAACCATTCATGGCTCTACTGAAATACTTACAAATCTGCTCAATAAAA
TTAGGGGGCAGTTCAGCTCAAAAGAAACATACGATCAACAAAATTTAAAAGATTCTATTAGTCTTTTCTTTATGACCGGT
GGAGAAATACCTCCTTCAAGAAAAGTTCCAGAAAGCCGTGTTGAAGAAGCTGGCATAGACGCCCCTAAAAATGCGCTTTA
A

Upstream 100 bases:

>100_bases
AAATGAACAAAAATATTGTCATTTATACAGCTCTCATGCTAATATTCAGCCAGTTTGATTCTTAGAATACTATGACGATA
GTTTAAAACAGGTGATTAAA

Downstream 100 bases:

>100_bases
AATTTTTTATCCTACCTATTAATTCATCAAGAAACACCAAATTTACTATTTGGTGTTTCTTGTCATCCTCGTATCTCGCC
TTTTAAAATTCTCCACTCAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 266; Mature: 265

Protein sequence:

>266_residues
MGRSEMKIASAELRNLMKAVSEGHYETVNTILDKDPELVNQYVPPTYDSPLARVLNKKHIDYKMLDILVKHHVDFDYPIN
HQKETPIELACKNQDLQLFKYLVQHNAPISEQAPHFLLVNSTNIKYLTEDKIKNTCEIIKLMGGLDAVSSKCDAEGNRFG
EQARKSQLINRFGGIVKYDYMQLLQSVYQIVDREVDAPTIHGSTEILTNLLNKIRGQFSSKETYDQQNLKDSISLFFMTG
GEIPPSRKVPESRVEEAGIDAPKNAL

Sequences:

>Translated_266_residues
MGRSEMKIASAELRNLMKAVSEGHYETVNTILDKDPELVNQYVPPTYDSPLARVLNKKHIDYKMLDILVKHHVDFDYPIN
HQKETPIELACKNQDLQLFKYLVQHNAPISEQAPHFLLVNSTNIKYLTEDKIKNTCEIIKLMGGLDAVSSKCDAEGNRFG
EQARKSQLINRFGGIVKYDYMQLLQSVYQIVDREVDAPTIHGSTEILTNLLNKIRGQFSSKETYDQQNLKDSISLFFMTG
GEIPPSRKVPESRVEEAGIDAPKNAL
>Mature_265_residues
GRSEMKIASAELRNLMKAVSEGHYETVNTILDKDPELVNQYVPPTYDSPLARVLNKKHIDYKMLDILVKHHVDFDYPINH
QKETPIELACKNQDLQLFKYLVQHNAPISEQAPHFLLVNSTNIKYLTEDKIKNTCEIIKLMGGLDAVSSKCDAEGNRFGE
QARKSQLINRFGGIVKYDYMQLLQSVYQIVDREVDAPTIHGSTEILTNLLNKIRGQFSSKETYDQQNLKDSISLFFMTGG
EIPPSRKVPESRVEEAGIDAPKNAL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30211; Mature: 30080

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: PS50297 ANK_REP_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGRSEMKIASAELRNLMKAVSEGHYETVNTILDKDPELVNQYVPPTYDSPLARVLNKKHI
CCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHCCCCCCCCHHHHHHHHHCC
DYKMLDILVKHHVDFDYPINHQKETPIELACKNQDLQLFKYLVQHNAPISEQAPHFLLVN
HHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHCCCCCCCCCCCEEEEE
STNIKYLTEDKIKNTCEIIKLMGGLDAVSSKCDAEGNRFGEQARKSQLINRFGGIVKYDY
CCCCEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHH
MQLLQSVYQIVDREVDAPTIHGSTEILTNLLNKIRGQFSSKETYDQQNLKDSISLFFMTG
HHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHEEEEEEC
GEIPPSRKVPESRVEEAGIDAPKNAL
CCCCCCCCCCHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
GRSEMKIASAELRNLMKAVSEGHYETVNTILDKDPELVNQYVPPTYDSPLARVLNKKHI
CCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHCCCCCCCCHHHHHHHHHCC
DYKMLDILVKHHVDFDYPINHQKETPIELACKNQDLQLFKYLVQHNAPISEQAPHFLLVN
HHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHCCCCCCCCCCCEEEEE
STNIKYLTEDKIKNTCEIIKLMGGLDAVSSKCDAEGNRFGEQARKSQLINRFGGIVKYDY
CCCCEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHH
MQLLQSVYQIVDREVDAPTIHGSTEILTNLLNKIRGQFSSKETYDQQNLKDSISLFFMTG
HHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHEEEEEEC
GEIPPSRKVPESRVEEAGIDAPKNAL
CCCCCCCCCCHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA