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The map label for this gene is 54293428

Identifier: 54293428

GI number: 54293428

Start: 519168

End: 519599

Strand: Reverse

Name: 54293428

Synonym: lpl0477

Alternate gene names: NA

Gene position: 519599-519168 (Counterclockwise)

Preceding gene: 54293430

Following gene: 54293422

Centisome position: 15.53

GC content: 33.1

Gene sequence:

>432_bases
ATGCATCCTGACTTAAAAGACTTACTTAATTACAGAAATCATAAAATTATTACCAGATATAATATGGATTACCCGACTGC
AGTCATGCAAGCTGAAGAGGCATTACATGAATTAATGAAATTTATTTGGCTCTGCCATAAACATAAAACAGATAAATTAC
TTTATCCTGATGATAAAAATCTGGATTTCTCTTGTGTCATTCATGCTGAAATGGCTGATATTGACAAGATGTGGCATACT
TTTCTTTTATTCACCAGAGATTATCATGAGTTTTGTGATACCTGTCTCAATGGAAATTTTTTTCATCATGATCCTTTAAT
TGGGGAAAATACCCCTGTTTCTGAAGAGGATTATGCTCTGGAGTTAACCCGCTATTTAACCTATATCCATGACCATTTAG
GTTCGGAAACTTTAATCAAATGGTTCCAATAA

Upstream 100 bases:

>100_bases
TTTTGCGGTCCGGGAACTTGTATTGGATGATATTACTGCAACCATGGCACGTTATCAAAAAACGTGCCGTTACACTTAAA
CCAATCAAAGCCCCATAATC

Downstream 100 bases:

>100_bases
ATCAAGCATGACAACCAAGCTTCTGTTCACAAAATGTTTTTTCCGCATTGATTATTTTATCCATATTGGTTTCAGTCCAA
CGAGTAAGTAAAACCAATAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 143; Mature: 143

Protein sequence:

>143_residues
MHPDLKDLLNYRNHKIITRYNMDYPTAVMQAEEALHELMKFIWLCHKHKTDKLLYPDDKNLDFSCVIHAEMADIDKMWHT
FLLFTRDYHEFCDTCLNGNFFHHDPLIGENTPVSEEDYALELTRYLTYIHDHLGSETLIKWFQ

Sequences:

>Translated_143_residues
MHPDLKDLLNYRNHKIITRYNMDYPTAVMQAEEALHELMKFIWLCHKHKTDKLLYPDDKNLDFSCVIHAEMADIDKMWHT
FLLFTRDYHEFCDTCLNGNFFHHDPLIGENTPVSEEDYALELTRYLTYIHDHLGSETLIKWFQ
>Mature_143_residues
MHPDLKDLLNYRNHKIITRYNMDYPTAVMQAEEALHELMKFIWLCHKHKTDKLLYPDDKNLDFSCVIHAEMADIDKMWHT
FLLFTRDYHEFCDTCLNGNFFHHDPLIGENTPVSEEDYALELTRYLTYIHDHLGSETLIKWFQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17236; Mature: 17236

Theoretical pI: Translated: 5.66; Mature: 5.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
7.0 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
7.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHPDLKDLLNYRNHKIITRYNMDYPTAVMQAEEALHELMKFIWLCHKHKTDKLLYPDDKN
CCCCHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCC
LDFSCVIHAEMADIDKMWHTFLLFTRDYHEFCDTCLNGNFFHHDPLIGENTPVSEEDYAL
CCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCCCHHHH
ELTRYLTYIHDHLGSETLIKWFQ
HHHHHHHHHHHHCCHHHHHHHCC
>Mature Secondary Structure
MHPDLKDLLNYRNHKIITRYNMDYPTAVMQAEEALHELMKFIWLCHKHKTDKLLYPDDKN
CCCCHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCC
LDFSCVIHAEMADIDKMWHTFLLFTRDYHEFCDTCLNGNFFHHDPLIGENTPVSEEDYAL
CCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCCCHHHH
ELTRYLTYIHDHLGSETLIKWFQ
HHHHHHHHHHHHCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA