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The map label for this gene is 54293395

Identifier: 54293395

GI number: 54293395

Start: 489199

End: 489861

Strand: Reverse

Name: 54293395

Synonym: lpl0444

Alternate gene names: NA

Gene position: 489861-489199 (Counterclockwise)

Preceding gene: 54293400

Following gene: 54293394

Centisome position: 14.64

GC content: 38.16

Gene sequence:

>663_bases
ATGCCTAAAGCATTTACCCATTTGTGTAAAAAAGTCAATCTCAGTTTATATAACGATACATTGACTGTCTACCCTAAATC
ATCTGTACTGCCAAAACCTATTCAAATACGTAGCGAACTTGATCTTCTTATGGTTCTGTTGTTTTCTCAAATGGATTGCA
ACAGCGCACAGGTTGATAATTTTTTTATGATGCGTTCGAATGAACTTGGTGTCTATCGCTTTATACATCGTGACGACACT
GATCATGATTTGTATCATCAAGATGAGTTTAGCATGGATGAGAACCATTACCATGCACAATTTGACAAGACTATTGACGA
GAGTAAATTGGAAAACATTCTGGGAATACTGGAAAAACATTCTCTTATTTCGTCTGAAGAGCACGTAAGCTTTATCGAAG
CCTACCATAAAGCCAATACTCTACCCGAAGATATGCCAAAACTGGAAACAACTCTGCCCAGTCCTTTACCTGTATCCTCT
CCTTCAGTTCACTCAGGCACAAAACGACCTGTTGTGAAAGAAAAAGAAGTAGATACTCCAACAACTTTCGCAGGACTAAG
AGTAGGATTTTTCCTTACTTCAACAAAAACAACAACAAAACCCCTATCCAAACCTCACGATGATGAGAAGAAAACTGGAA
CGAATGGGTATGGATTCCATTAA

Upstream 100 bases:

>100_bases
AACATTTAATTCTTCTTAAGGAAACCTTAATGTTAAGGCTTTAAACTATAGGTCCAAAATATAGACAATTACTTTTTTTA
AAAAATCATTGGAGTCCCTT

Downstream 100 bases:

>100_bases
TTGATATAGTTTAGTAAACCATAGTGAAGATCGTTCTATAGGTTTACTATATGGCAATTAACAGTGATTTATCCAAAATC
TGAAAAACTGTAGAGTAACT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 220; Mature: 219

Protein sequence:

>220_residues
MPKAFTHLCKKVNLSLYNDTLTVYPKSSVLPKPIQIRSELDLLMVLLFSQMDCNSAQVDNFFMMRSNELGVYRFIHRDDT
DHDLYHQDEFSMDENHYHAQFDKTIDESKLENILGILEKHSLISSEEHVSFIEAYHKANTLPEDMPKLETTLPSPLPVSS
PSVHSGTKRPVVKEKEVDTPTTFAGLRVGFFLTSTKTTTKPLSKPHDDEKKTGTNGYGFH

Sequences:

>Translated_220_residues
MPKAFTHLCKKVNLSLYNDTLTVYPKSSVLPKPIQIRSELDLLMVLLFSQMDCNSAQVDNFFMMRSNELGVYRFIHRDDT
DHDLYHQDEFSMDENHYHAQFDKTIDESKLENILGILEKHSLISSEEHVSFIEAYHKANTLPEDMPKLETTLPSPLPVSS
PSVHSGTKRPVVKEKEVDTPTTFAGLRVGFFLTSTKTTTKPLSKPHDDEKKTGTNGYGFH
>Mature_219_residues
PKAFTHLCKKVNLSLYNDTLTVYPKSSVLPKPIQIRSELDLLMVLLFSQMDCNSAQVDNFFMMRSNELGVYRFIHRDDTD
HDLYHQDEFSMDENHYHAQFDKTIDESKLENILGILEKHSLISSEEHVSFIEAYHKANTLPEDMPKLETTLPSPLPVSSP
SVHSGTKRPVVKEKEVDTPTTFAGLRVGFFLTSTKTTTKPLSKPHDDEKKTGTNGYGFH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25089; Mature: 24957

Theoretical pI: Translated: 6.37; Mature: 6.37

Prosite motif: PS00430 TONB_DEPENDENT_REC_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPKAFTHLCKKVNLSLYNDTLTVYPKSSVLPKPIQIRSELDLLMVLLFSQMDCNSAQVDN
CCHHHHHHHHHHCCEEECCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCC
FFMMRSNELGVYRFIHRDDTDHDLYHQDEFSMDENHYHAQFDKTIDESKLENILGILEKH
EEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
SLISSEEHVSFIEAYHKANTLPEDMPKLETTLPSPLPVSSPSVHSGTKRPVVKEKEVDTP
HHHCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
TTFAGLRVGFFLTSTKTTTKPLSKPHDDEKKTGTNGYGFH
CHHHHHEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
PKAFTHLCKKVNLSLYNDTLTVYPKSSVLPKPIQIRSELDLLMVLLFSQMDCNSAQVDN
CHHHHHHHHHHCCEEECCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCC
FFMMRSNELGVYRFIHRDDTDHDLYHQDEFSMDENHYHAQFDKTIDESKLENILGILEKH
EEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
SLISSEEHVSFIEAYHKANTLPEDMPKLETTLPSPLPVSSPSVHSGTKRPVVKEKEVDTP
HHHCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
TTFAGLRVGFFLTSTKTTTKPLSKPHDDEKKTGTNGYGFH
CHHHHHEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA