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The map label for this gene is 54293372

Identifier: 54293372

GI number: 54293372

Start: 468947

End: 470173

Strand: Reverse

Name: 54293372

Synonym: lpl0421

Alternate gene names: NA

Gene position: 470173-468947 (Counterclockwise)

Preceding gene: 54293373

Following gene: 54293371

Centisome position: 14.05

GC content: 39.12

Gene sequence:

>1227_bases
ATGGTTATGTCTGATTTTCCTATTTTTTCTGTCTTGGGGATTGAAATAGAATATATGCTGGTGGATAAAGAGAGTTTAAA
TGTCCAACCTAAAAGCGATCTTATTCTAAGAGCTTTGGCAGGTCATCAGGTTAATGAAATAGAATTAGGAGACATTGCGA
TAAGCAATGAATTAGTATTGCATGTCCTTGAGTTAAAAAATAATGGTCCCAAACCACCACATGTTCCAGTAGCTGAACAT
TTCCAGAAAACCATTAGAGAGCTCCAGCCCCTTCTTGCTCAACACAATTTATTGCTATTACCTACTGGCGCTCATCCCTG
GATGGACCCAAATACTGAAACAATTCGCTGGCCTCATGGTAACCATGATATCTATAATCAATTTAATTCAATTTTCAATT
GCCAGGGACATGGCTGGGCAAACTTGCAAAGTATGCATATCAACCTGCCTTATTCCAATGAAGAAGAATTTTGCCAATTG
CATAACACCACACGCTTGATTTTACCCTTATTACCCGCCATTGCGGCAAGTACTCCATTCCTTGATGGCCAAGCTACAGG
ATTACTGGATTCCCGCTTGTACTTTTATTGTCGCAATCAGCAACGCATTCCCTCCATCAGCGGCGATATTATTCCTGAGT
TTATTAGAACAGAAAGGGAATACCAGGAACAAATTCTCGAACCCATGTATCGAGACATTAGCCCTTATGATCCCGAAGGG
ATATTACAATATCAATGGCTAAATTCTCGTGCTGCAATTCCCAAGTTTGACATGAAGGCTATTGAAATTCGTATTCTTGA
CAGCCAGGAATGTATAGAAGCAGACATTGCCATAGCAAAAGCTATCAACGCCATTTTAAAATACTGGCAAAGCACCTCGA
ATTTTTATCTTGATAATCCATGCGACACCAAGAGTTTAAAATACGTTTTTGATGAAACCATAAAAAACGGATTAAGGTGT
CATATCGATAACAAAAAATTACTGGAGCAATGGCAATTACCCCTTCAAGGGATGTCAGTCAATGCCATCTGGTCACTATT
GATCGAAAGAATTAGTCATGAACTGGATAGGAAACAGCAACTGGCTCTGGAACTTATTTTAAAACAGGGAAATTTGAGTG
AAAGAATCCTCAAGGCTTGTAGCTCCTGTGTCAATCATGATTCGTTAAAACAAGTGTATACGCAATTAGCACATTGTTTG
CTTCGTAATGAACAATTTACCCCCTGA

Upstream 100 bases:

>100_bases
GATAATCCCAATATTGATCATGGCCTTGAAGATAAAATACTAGGCCAAAATCTGTATGAGCAGATCATGAGTGTCTTCTT
ACAACGAATTCGCAGGAAAC

Downstream 100 bases:

>100_bases
TATAATGAAAAATATAGCCCTCCTAATCAGTTGTGAACATGCTGTCAATACAGTTCCCTATGAATATCAAACCCTGTTTG
AACCTCATAAAGCCATATTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 408; Mature: 408

Protein sequence:

>408_residues
MVMSDFPIFSVLGIEIEYMLVDKESLNVQPKSDLILRALAGHQVNEIELGDIAISNELVLHVLELKNNGPKPPHVPVAEH
FQKTIRELQPLLAQHNLLLLPTGAHPWMDPNTETIRWPHGNHDIYNQFNSIFNCQGHGWANLQSMHINLPYSNEEEFCQL
HNTTRLILPLLPAIAASTPFLDGQATGLLDSRLYFYCRNQQRIPSISGDIIPEFIRTEREYQEQILEPMYRDISPYDPEG
ILQYQWLNSRAAIPKFDMKAIEIRILDSQECIEADIAIAKAINAILKYWQSTSNFYLDNPCDTKSLKYVFDETIKNGLRC
HIDNKKLLEQWQLPLQGMSVNAIWSLLIERISHELDRKQQLALELILKQGNLSERILKACSSCVNHDSLKQVYTQLAHCL
LRNEQFTP

Sequences:

>Translated_408_residues
MVMSDFPIFSVLGIEIEYMLVDKESLNVQPKSDLILRALAGHQVNEIELGDIAISNELVLHVLELKNNGPKPPHVPVAEH
FQKTIRELQPLLAQHNLLLLPTGAHPWMDPNTETIRWPHGNHDIYNQFNSIFNCQGHGWANLQSMHINLPYSNEEEFCQL
HNTTRLILPLLPAIAASTPFLDGQATGLLDSRLYFYCRNQQRIPSISGDIIPEFIRTEREYQEQILEPMYRDISPYDPEG
ILQYQWLNSRAAIPKFDMKAIEIRILDSQECIEADIAIAKAINAILKYWQSTSNFYLDNPCDTKSLKYVFDETIKNGLRC
HIDNKKLLEQWQLPLQGMSVNAIWSLLIERISHELDRKQQLALELILKQGNLSERILKACSSCVNHDSLKQVYTQLAHCL
LRNEQFTP
>Mature_408_residues
MVMSDFPIFSVLGIEIEYMLVDKESLNVQPKSDLILRALAGHQVNEIELGDIAISNELVLHVLELKNNGPKPPHVPVAEH
FQKTIRELQPLLAQHNLLLLPTGAHPWMDPNTETIRWPHGNHDIYNQFNSIFNCQGHGWANLQSMHINLPYSNEEEFCQL
HNTTRLILPLLPAIAASTPFLDGQATGLLDSRLYFYCRNQQRIPSISGDIIPEFIRTEREYQEQILEPMYRDISPYDPEG
ILQYQWLNSRAAIPKFDMKAIEIRILDSQECIEADIAIAKAINAILKYWQSTSNFYLDNPCDTKSLKYVFDETIKNGLRC
HIDNKKLLEQWQLPLQGMSVNAIWSLLIERISHELDRKQQLALELILKQGNLSERILKACSSCVNHDSLKQVYTQLAHCL
LRNEQFTP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006336 [H]

Pfam domain/function: PF04107 GCS2 [H]

EC number: NA

Molecular weight: Translated: 46939; Mature: 46939

Theoretical pI: Translated: 5.69; Mature: 5.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVMSDFPIFSVLGIEIEYMLVDKESLNVQPKSDLILRALAGHQVNEIELGDIAISNELVL
CCCCCCCHHHHHCEEEEEEEEECCCCCCCCCHHHHHHHHHCCCCCEEEECCEEECCHHHH
HVLELKNNGPKPPHVPVAEHFQKTIRELQPLLAQHNLLLLPTGAHPWMDPNTETIRWPHG
HHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCEEECCCC
NHDIYNQFNSIFNCQGHGWANLQSMHINLPYSNEEEFCQLHNTTRLILPLLPAIAASTPF
CCHHHHHHHHHEECCCCCCCCEEEEEEECCCCCHHHHHHHHCCHHHHHHHHHHHHCCCCC
LDGQATGLLDSRLYFYCRNQQRIPSISGDIIPEFIRTEREYQEQILEPMYRDISPYDPEG
CCCCCCCHHHCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
ILQYQWLNSRAAIPKFDMKAIEIRILDSQECIEADIAIAKAINAILKYWQSTSNFYLDNP
CEEEEECCCCCCCCCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCC
CDTKSLKYVFDETIKNGLRCHIDNKKLLEQWQLPLQGMSVNAIWSLLIERISHELDRKQQ
CCCHHHHHHHHHHHHCCCEEEECCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
LALELILKQGNLSERILKACSSCVNHDSLKQVYTQLAHCLLRNEQFTP
HHHHHHHHCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MVMSDFPIFSVLGIEIEYMLVDKESLNVQPKSDLILRALAGHQVNEIELGDIAISNELVL
CCCCCCCHHHHHCEEEEEEEEECCCCCCCCCHHHHHHHHHCCCCCEEEECCEEECCHHHH
HVLELKNNGPKPPHVPVAEHFQKTIRELQPLLAQHNLLLLPTGAHPWMDPNTETIRWPHG
HHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCEEECCCC
NHDIYNQFNSIFNCQGHGWANLQSMHINLPYSNEEEFCQLHNTTRLILPLLPAIAASTPF
CCHHHHHHHHHEECCCCCCCCEEEEEEECCCCCHHHHHHHHCCHHHHHHHHHHHHCCCCC
LDGQATGLLDSRLYFYCRNQQRIPSISGDIIPEFIRTEREYQEQILEPMYRDISPYDPEG
CCCCCCCHHHCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
ILQYQWLNSRAAIPKFDMKAIEIRILDSQECIEADIAIAKAINAILKYWQSTSNFYLDNP
CEEEEECCCCCCCCCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCC
CDTKSLKYVFDETIKNGLRCHIDNKKLLEQWQLPLQGMSVNAIWSLLIERISHELDRKQQ
CCCHHHHHHHHHHHHCCCEEEECCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
LALELILKQGNLSERILKACSSCVNHDSLKQVYTQLAHCLLRNEQFTP
HHHHHHHHCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9389475 [H]