Click here to switch to the map view.

The map label for this gene is 54293368

Identifier: 54293368

GI number: 54293368

Start: 462490

End: 462876

Strand: Reverse

Name: 54293368

Synonym: lpl0417

Alternate gene names: NA

Gene position: 462876-462490 (Counterclockwise)

Preceding gene: 54293370

Following gene: 54293364

Centisome position: 13.84

GC content: 40.05

Gene sequence:

>387_bases
ATGAAAAAATGGACAGTACTGGCAGCAAGTAGCCTTTTAATGGTCAACGCCTACGCTAATGAATCATTCTGTGGGTACAA
GGATTTTTTTCATTTAGGTGACAAAACTCACCCTGGAATTTATGTGGTCAGTGGTTATAATGACTCAGATGTCGTATTAC
AAATCGTTGGACCACGTAGCTTTGTAATCAGAGATGGTTTTGATTGTCGAGCAGGCTATGCTCATGTCACTGTAGCTTAT
GACAATGCCAATTGGTGCGTGCTTGATATTAATGACGGTCCATTTATGAATCATCCTGTTGTCAGTGCTTCCTGCAATGG
TCTTCGTTACGTCAATACCACCTATGATGGCTTTGGAAGTTACTCCTATTCTATCAACATTGAATAA

Upstream 100 bases:

>100_bases
AGAGTAGGTTTTTCAAAAACAAAAGAACAAGATGATTGTTTAATAGCCATCGATTCCCTATAATTCGATTTCCTGAATAA
CAATAAGAAGGTATTTTCGT

Downstream 100 bases:

>100_bases
AAGTAACGTGAGTTATGGATAACGATTATATAAGAAGCAATCGATATCCAGGGACCGTTTGGGCTGAGAAGATACATGAG
CATCTTCTCGAAGCCCCGGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 128; Mature: 128

Protein sequence:

>128_residues
MKKWTVLAASSLLMVNAYANESFCGYKDFFHLGDKTHPGIYVVSGYNDSDVVLQIVGPRSFVIRDGFDCRAGYAHVTVAY
DNANWCVLDINDGPFMNHPVVSASCNGLRYVNTTYDGFGSYSYSINIE

Sequences:

>Translated_128_residues
MKKWTVLAASSLLMVNAYANESFCGYKDFFHLGDKTHPGIYVVSGYNDSDVVLQIVGPRSFVIRDGFDCRAGYAHVTVAY
DNANWCVLDINDGPFMNHPVVSASCNGLRYVNTTYDGFGSYSYSINIE
>Mature_128_residues
MKKWTVLAASSLLMVNAYANESFCGYKDFFHLGDKTHPGIYVVSGYNDSDVVLQIVGPRSFVIRDGFDCRAGYAHVTVAY
DNANWCVLDINDGPFMNHPVVSASCNGLRYVNTTYDGFGSYSYSINIE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14201; Mature: 14201

Theoretical pI: Translated: 5.48; Mature: 5.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKWTVLAASSLLMVNAYANESFCGYKDFFHLGDKTHPGIYVVSGYNDSDVVLQIVGPRS
CCEEEEEEECEEEEEEECCCCCCCCCCHHEECCCCCCCCEEEEECCCCCCEEEEEECCCE
FVIRDGFDCRAGYAHVTVAYDNANWCVLDINDGPFMNHPVVSASCNGLRYVNTTYDGFGS
EEEECCCCCCCCEEEEEEEECCCCEEEEECCCCCCCCCCEEEECCCCEEEEEECCCCCCC
YSYSINIE
EEEEEEEC
>Mature Secondary Structure
MKKWTVLAASSLLMVNAYANESFCGYKDFFHLGDKTHPGIYVVSGYNDSDVVLQIVGPRS
CCEEEEEEECEEEEEEECCCCCCCCCCHHEECCCCCCCCEEEEECCCCCCEEEEEECCCE
FVIRDGFDCRAGYAHVTVAYDNANWCVLDINDGPFMNHPVVSASCNGLRYVNTTYDGFGS
EEEECCCCCCCCEEEEEEEECCCCEEEEECCCCCCCCCCEEEECCCCEEEEEECCCCCCC
YSYSINIE
EEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA