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The map label for this gene is smpA [C]

Identifier: 54293364

GI number: 54293364

Start: 459721

End: 460035

Strand: Reverse

Name: smpA [C]

Synonym: lpl0413

Alternate gene names: 54293364

Gene position: 460035-459721 (Counterclockwise)

Preceding gene: 54293368

Following gene: 54293360

Centisome position: 13.75

GC content: 37.14

Gene sequence:

>315_bases
ATGCGAATAATGACTTTTTTTATTTGTTTCATTTTAACATTAACCTTAACCCAATGTGCATCATATGACTTCTCAAGACG
CATTACTCAGCAAGGTAATTTGTTGCCTCAATCCAAAATTGCCCGGTTAAAAACAGGCATGAGTAAGAATGACGTTGCAA
TCTTGATGGGTACCAGCTTAATGAGTCCAACATTCAACAATGACAGGTGGGATTATGCTTATACCTGGCGACGAGGGAAA
GGTAACCTGGAAATTCGTAATGTTGTGTTATATTTTTCCAGAGGCTCTTTAGTAAAAATAGAACATAAGCCGTAA

Upstream 100 bases:

>100_bases
TCTGGCCGAATAATGGCAAATACCAAATTCCACATGATGACAGGTGCCTTTCAATAAATGACATGTTATTATGGCGAAAT
TTTTCATGGTAGGCAAAAAA

Downstream 100 bases:

>100_bases
TTTACTATCTCCCCCTTGCCTAAGTGATTAGATAAGGGGAAAATTGTTTTTAAGAGTTCAGTGCCGATTAAAATGCCTAA
TTTGCCTCTATTTTTTAAAC

Product: hypothetical protein

Products: NA

Alternate protein names: SmpA/OmlA; SmpA/OmlA Domain-Containing Protein; Small Protein A

Number of amino acids: Translated: 104; Mature: 104

Protein sequence:

>104_residues
MRIMTFFICFILTLTLTQCASYDFSRRITQQGNLLPQSKIARLKTGMSKNDVAILMGTSLMSPTFNNDRWDYAYTWRRGK
GNLEIRNVVLYFSRGSLVKIEHKP

Sequences:

>Translated_104_residues
MRIMTFFICFILTLTLTQCASYDFSRRITQQGNLLPQSKIARLKTGMSKNDVAILMGTSLMSPTFNNDRWDYAYTWRRGK
GNLEIRNVVLYFSRGSLVKIEHKP
>Mature_104_residues
MRIMTFFICFILTLTLTQCASYDFSRRITQQGNLLPQSKIARLKTGMSKNDVAILMGTSLMSPTFNNDRWDYAYTWRRGK
GNLEIRNVVLYFSRGSLVKIEHKP

Specific function: Unknown

COG id: COG2913

COG function: function code J; Small protein A (tmRNA-binding)

Gene ontology:

Cell location: Attached To The Outer Membrane By A Lipid Anchor [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12087; Mature: 12087

Theoretical pI: Translated: 10.71; Mature: 10.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
6.7 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
6.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIMTFFICFILTLTLTQCASYDFSRRITQQGNLLPQSKIARLKTGMSKNDVAILMGTSL
CHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCHHHHHHHHCCCCCCCEEEEEECCC
MSPTFNNDRWDYAYTWRRGKGNLEIRNVVLYFSRGSLVKIEHKP
CCCCCCCCCCCEEEEEECCCCCEEEEEEEEEECCCCEEEEECCC
>Mature Secondary Structure
MRIMTFFICFILTLTLTQCASYDFSRRITQQGNLLPQSKIARLKTGMSKNDVAILMGTSL
CHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCHHHHHHHHCCCCCCCEEEEEECCC
MSPTFNNDRWDYAYTWRRGKGNLEIRNVVLYFSRGSLVKIEHKP
CCCCCCCCCCCEEEEEECCCCCEEEEEEEEEECCCCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA