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The map label for this gene is 54293188

Identifier: 54293188

GI number: 54293188

Start: 259905

End: 260471

Strand: Reverse

Name: 54293188

Synonym: lpl0234

Alternate gene names: NA

Gene position: 260471-259905 (Counterclockwise)

Preceding gene: 54293189

Following gene: 54293187

Centisome position: 7.79

GC content: 39.33

Gene sequence:

>567_bases
ATGAAAGCAAAATACGACTCCACAGAGCCTGGACTCCAAAAGTTACCTCCTGAAATCAAGGTAATGATTCTTGAGCTTCT
TGATGCCAAATCAAAACTTGCTCTTTCACAATCAAATTATGGTTGGCGTGATTTAATTCGACATCTGCCAGAATGCACCA
AAGAAATAACGAATACATTATTTCGTCTTGATAAAAAACGCCATCATCAAGAGATTGTACAAATGATGTCGGGAAGAGTT
ACAGCAAGTTCTATGGCTGAGCTATTTGAAGAATTACTATGTTTTAGCATACCTTCGTCCTATGTGTTTTTAATCTTCTT
CATATCGCAAAAATCTGTAGCGCTTATAGAAGTCTTAACTGTAATCCTTGTGTTTGCTGCACTAACCTCTCTCACCCATG
ATCTGGTTGATTATTTTATTGAAAGTGACACAAAAGCTGAGAAACAGCATGCACACCGCCGTGCTTTTCAATTCTTTGCC
CAACCCAGTTCAAACGCTGCACAACAAAACTCGGAGGAAGATAATTTAAGTGCTGATCCCAAAGCCTGGCCATGTGAGCC
ATTGTAG

Upstream 100 bases:

>100_bases
TATATAGCTCCTATCCAAATAAATTATTTTTGACACAATGCAAAACCACCTAAAATAAATTTTAATTTTTTCAGAAAATA
AATAATTTAGGTTATTCACT

Downstream 100 bases:

>100_bases
TTCGGGTCTTGGCCCAATATTTACCGAATGCCTCTACTTAATTCTTCGATGTTTATTATATTTACAACCTTATTTTGATC
CTCCACTCACCCGAATATCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 188; Mature: 188

Protein sequence:

>188_residues
MKAKYDSTEPGLQKLPPEIKVMILELLDAKSKLALSQSNYGWRDLIRHLPECTKEITNTLFRLDKKRHHQEIVQMMSGRV
TASSMAELFEELLCFSIPSSYVFLIFFISQKSVALIEVLTVILVFAALTSLTHDLVDYFIESDTKAEKQHAHRRAFQFFA
QPSSNAAQQNSEEDNLSADPKAWPCEPL

Sequences:

>Translated_188_residues
MKAKYDSTEPGLQKLPPEIKVMILELLDAKSKLALSQSNYGWRDLIRHLPECTKEITNTLFRLDKKRHHQEIVQMMSGRV
TASSMAELFEELLCFSIPSSYVFLIFFISQKSVALIEVLTVILVFAALTSLTHDLVDYFIESDTKAEKQHAHRRAFQFFA
QPSSNAAQQNSEEDNLSADPKAWPCEPL
>Mature_188_residues
MKAKYDSTEPGLQKLPPEIKVMILELLDAKSKLALSQSNYGWRDLIRHLPECTKEITNTLFRLDKKRHHQEIVQMMSGRV
TASSMAELFEELLCFSIPSSYVFLIFFISQKSVALIEVLTVILVFAALTSLTHDLVDYFIESDTKAEKQHAHRRAFQFFA
QPSSNAAQQNSEEDNLSADPKAWPCEPL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21434; Mature: 21434

Theoretical pI: Translated: 6.24; Mature: 6.24

Prosite motif: PS50181 FBOX

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKAKYDSTEPGLQKLPPEIKVMILELLDAKSKLALSQSNYGWRDLIRHLPECTKEITNTL
CCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH
FRLDKKRHHQEIVQMMSGRVTASSMAELFEELLCFSIPSSYVFLIFFISQKSVALIEVLT
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHH
VILVFAALTSLTHDLVDYFIESDTKAEKQHAHRRAFQFFAQPSSNAAQQNSEEDNLSADP
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCC
KAWPCEPL
CCCCCCCC
>Mature Secondary Structure
MKAKYDSTEPGLQKLPPEIKVMILELLDAKSKLALSQSNYGWRDLIRHLPECTKEITNTL
CCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH
FRLDKKRHHQEIVQMMSGRVTASSMAELFEELLCFSIPSSYVFLIFFISQKSVALIEVLT
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHH
VILVFAALTSLTHDLVDYFIESDTKAEKQHAHRRAFQFFAQPSSNAAQQNSEEDNLSADP
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCC
KAWPCEPL
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA