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The map label for this gene is yjbQ [C]

Identifier: 54293179

GI number: 54293179

Start: 252157

End: 252576

Strand: Reverse

Name: yjbQ [C]

Synonym: lpl0225

Alternate gene names: 54293179

Gene position: 252576-252157 (Counterclockwise)

Preceding gene: 54293182

Following gene: 54293177

Centisome position: 7.55

GC content: 40.48

Gene sequence:

>420_bases
ATGAAAACGTACCGCAAAGAACTATGGTTTAATATCCCGGAGCGTATGGGATTTATTAATATAACCGATAAAATCATTGA
ATGCTTAAAGGAAAGTAGTATTCAGGAAGGTTTAATATTGGTCAATGCCATGCATATCACTGCTTCCGTATTCATCAATG
ATGATGAAAGCGGCTTGCATCAAGATTATAAAAAATGGCTTGAACAAATAGCACCCCACGAACCCATTAGGCAATACCGC
CATAATGACACCGGCGAGGATAATGCTGATGCCCATATCAAACGCCAAATCATGGGACGAGAAGTGGTCGTCGCTATTAC
AGAAGGAAGACTGGATTTTGGCCCATGGGAGCAAATATTCTATGGTGAATTTGACGGTCGCCGTGATAAAAGAGTCCTTG
TAAAAATTATCGGCCAATAA

Upstream 100 bases:

>100_bases
CTAAATAAAGAATAAATTTAAATTATCATCCATTTGAAATATAACCAGGAATGCTATATGTTTGCCAGATATTGATTTAT
CGCCCAATCATTATCAAATC

Downstream 100 bases:

>100_bases
ATCAGGCCTCGAAGGCATCATGGGTAACTTAAGAATAAAAGGTCAGGCATTTCTTGATTCTCTAGTAAGCCATGCTTCTA
ATTCTCGCTGAGAAAAAAGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 139; Mature: 139

Protein sequence:

>139_residues
MKTYRKELWFNIPERMGFINITDKIIECLKESSIQEGLILVNAMHITASVFINDDESGLHQDYKKWLEQIAPHEPIRQYR
HNDTGEDNADAHIKRQIMGREVVVAITEGRLDFGPWEQIFYGEFDGRRDKRVLVKIIGQ

Sequences:

>Translated_139_residues
MKTYRKELWFNIPERMGFINITDKIIECLKESSIQEGLILVNAMHITASVFINDDESGLHQDYKKWLEQIAPHEPIRQYR
HNDTGEDNADAHIKRQIMGREVVVAITEGRLDFGPWEQIFYGEFDGRRDKRVLVKIIGQ
>Mature_139_residues
MKTYRKELWFNIPERMGFINITDKIIECLKESSIQEGLILVNAMHITASVFINDDESGLHQDYKKWLEQIAPHEPIRQYR
HNDTGEDNADAHIKRQIMGREVVVAITEGRLDFGPWEQIFYGEFDGRRDKRVLVKIIGQ

Specific function: Unknown

COG id: COG0432

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0047 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001602 [H]

Pfam domain/function: PF01894 UPF0047 [H]

EC number: NA

Molecular weight: Translated: 16315; Mature: 16315

Theoretical pI: Translated: 6.01; Mature: 6.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTYRKELWFNIPERMGFINITDKIIECLKESSIQEGLILVNAMHITASVFINDDESGLH
CCCHHHHHHCCCHHHCCEECHHHHHHHHHHHCCCCCCEEEEEEEEEEEEEEECCCCCCHH
QDYKKWLEQIAPHEPIRQYRHNDTGEDNADAHIKRQIMGREVVVAITEGRLDFGPWEQIF
HHHHHHHHHHCCCCHHHHHCCCCCCCCCCHHHHHHHHCCCEEEEEEECCCCCCCCHHHHE
YGEFDGRRDKRVLVKIIGQ
ECCCCCCCCHHHHHHEECC
>Mature Secondary Structure
MKTYRKELWFNIPERMGFINITDKIIECLKESSIQEGLILVNAMHITASVFINDDESGLH
CCCHHHHHHCCCHHHCCEECHHHHHHHHHHHCCCCCCEEEEEEEEEEEEEEECCCCCCHH
QDYKKWLEQIAPHEPIRQYRHNDTGEDNADAHIKRQIMGREVVVAITEGRLDFGPWEQIF
HHHHHHHHHHCCCCHHHHHCCCCCCCCCCHHHHHHHHCCCEEEEEEECCCCCCCCHHHHE
YGEFDGRRDKRVLVKIIGQ
ECCCCCCCCHHHHHHEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9389475 [H]