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The map label for this gene is lvhB6

Identifier: 54293118

GI number: 54293118

Start: 187589

End: 188629

Strand: Direct

Name: lvhB6

Synonym: lpl0157

Alternate gene names: NA

Gene position: 187589-188629 (Clockwise)

Preceding gene: 54293117

Following gene: 54293119

Centisome position: 5.61

GC content: 45.24

Gene sequence:

>1041_bases
ATGAATACACTACAGTTTGATAATTTTATCATACAGCTTTCTGGTGAAGTCGATAAGCTGACCAATCACTTTGTTTTTGA
TGGCTATACCGCTCTTGCTTCACTGCTTAAAGCCCCTTTGGGAGCGATGATTGTTCTTTACATCATTTTGAAAGGCTATG
GAATTGCTTTGGGTGTTATCGAACGACCTCAGCATGAATTGTTTCGATTCAGTATGCGGGCGGGACTTATTTACATGATG
GCTATGAACTGGGATCTGTTTTCATCCTACATGCGCGATCTATTTGTATCGGGTAGCGAGTCCATTGCTACCCGATTGAT
GCAGGCGGTTCACAAATACCCATCAGGCGGTTCAATTAATCAGGGGTTACAAAACGTATTGAATGAAATCCTCAAGCTGG
GTTCGGATTTATTTGATGCAGGATCACTCAGAAAACTCACGCCCTATTTTGCGGGCATGATGGTGTTTTTATCAGGGAGT
GTCACGATAGGTCTGGCTTTTATTGAAATCGTCATCGCCAAGCTGATGTTGGCTGTGACCTTGTGCACAGCACCCTTATT
CATCCTGTTTACGCTTTTTGACCAAACCAAATCCTTTTTTGACCGATGGCTTGGCGTGCTCGCCGGATTTGCCTTTGTGC
TTATTTTTGTGTCCAGCGTGGTGGGGCTTTGCATCCACTTGTTGCATTGGGTGACTTATGCCTTTTTAGGCAATACGGAA
ACGCTTACGGCTGCCATTTGGGTACCAATTTTTATTGTGGCCTGTTTATGTGTCATGGGCATCACCCAAGCCGTTGCTAT
TGGAAAAAGTATTGGTGGTTCGGTGTGCACTTCGGCTGGCTCTGCCATGGTGGGAGGCTTTATTGGTGGCAGTTTAGGGG
CATGGGGATTTTCGAAGTCCTCCGTTCAAAAGCCAATAAATACTCTGCGCCAAGGATTAGGCAAGGCATCGCATCTCGTG
GAAAAGGGCAAACAACTGGGGGAAGCCAGTCACAATGTATTCAAGCAACTGCATAAACACTTAAGAAAAGGAGCATCATG
A

Upstream 100 bases:

>100_bases
GGCTGATTTAACCGAGCAAAAAGTGTTTGAATCACTGGCTGATGAATATGCCGAAACAGCAGCCATCATTTGGCCTCATT
TTGTTTCGGGAACCTAAATC

Downstream 100 bases:

>100_bases
GTAAAACCAATTTGAACGATTACTTTAAGCGTGCGCGAAGTTGGGCAGACGACCAGTTTGGCCGAATTGAGCAATCACGA
AACCGATATCAAGCCGCATT

Product: hypothetical protein

Products: NA

Alternate protein names: Type IV Secretion; Conjugal Transfer Protein; VblB6 Protein; Type IV Secretory Pathway Component; Type IV Secretory Pathway VirB6 Components; Type IV Secretory Pathway AvhB6 Protein; VirB6 Type IV Secretion Protein

Number of amino acids: Translated: 346; Mature: 346

Protein sequence:

>346_residues
MNTLQFDNFIIQLSGEVDKLTNHFVFDGYTALASLLKAPLGAMIVLYIILKGYGIALGVIERPQHELFRFSMRAGLIYMM
AMNWDLFSSYMRDLFVSGSESIATRLMQAVHKYPSGGSINQGLQNVLNEILKLGSDLFDAGSLRKLTPYFAGMMVFLSGS
VTIGLAFIEIVIAKLMLAVTLCTAPLFILFTLFDQTKSFFDRWLGVLAGFAFVLIFVSSVVGLCIHLLHWVTYAFLGNTE
TLTAAIWVPIFIVACLCVMGITQAVAIGKSIGGSVCTSAGSAMVGGFIGGSLGAWGFSKSSVQKPINTLRQGLGKASHLV
EKGKQLGEASHNVFKQLHKHLRKGAS

Sequences:

>Translated_346_residues
MNTLQFDNFIIQLSGEVDKLTNHFVFDGYTALASLLKAPLGAMIVLYIILKGYGIALGVIERPQHELFRFSMRAGLIYMM
AMNWDLFSSYMRDLFVSGSESIATRLMQAVHKYPSGGSINQGLQNVLNEILKLGSDLFDAGSLRKLTPYFAGMMVFLSGS
VTIGLAFIEIVIAKLMLAVTLCTAPLFILFTLFDQTKSFFDRWLGVLAGFAFVLIFVSSVVGLCIHLLHWVTYAFLGNTE
TLTAAIWVPIFIVACLCVMGITQAVAIGKSIGGSVCTSAGSAMVGGFIGGSLGAWGFSKSSVQKPINTLRQGLGKASHLV
EKGKQLGEASHNVFKQLHKHLRKGAS
>Mature_346_residues
MNTLQFDNFIIQLSGEVDKLTNHFVFDGYTALASLLKAPLGAMIVLYIILKGYGIALGVIERPQHELFRFSMRAGLIYMM
AMNWDLFSSYMRDLFVSGSESIATRLMQAVHKYPSGGSINQGLQNVLNEILKLGSDLFDAGSLRKLTPYFAGMMVFLSGS
VTIGLAFIEIVIAKLMLAVTLCTAPLFILFTLFDQTKSFFDRWLGVLAGFAFVLIFVSSVVGLCIHLLHWVTYAFLGNTE
TLTAAIWVPIFIVACLCVMGITQAVAIGKSIGGSVCTSAGSAMVGGFIGGSLGAWGFSKSSVQKPINTLRQGLGKASHLV
EKGKQLGEASHNVFKQLHKHLRKGAS

Specific function: Unknown

COG id: COG3704

COG function: function code U; Type IV secretory pathway, VirB6 components

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37528; Mature: 37528

Theoretical pI: Translated: 9.53; Mature: 9.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTLQFDNFIIQLSGEVDKLTNHFVFDGYTALASLLKAPLGAMIVLYIILKGYGIALGVI
CCCCCCCCEEEEECCCHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHH
ERPQHELFRFSMRAGLIYMMAMNWDLFSSYMRDLFVSGSESIATRLMQAVHKYPSGGSIN
CCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCHH
QGLQNVLNEILKLGSDLFDAGSLRKLTPYFAGMMVFLSGSVTIGLAFIEIVIAKLMLAVT
HHHHHHHHHHHHHCCHHHCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
LCTAPLFILFTLFDQTKSFFDRWLGVLAGFAFVLIFVSSVVGLCIHLLHWVTYAFLGNTE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
TLTAAIWVPIFIVACLCVMGITQAVAIGKSIGGSVCTSAGSAMVGGFIGGSLGAWGFSKS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCHHHHHHHHCCCCCCCCCCHH
SVQKPINTLRQGLGKASHLVEKGKQLGEASHNVFKQLHKHLRKGAS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MNTLQFDNFIIQLSGEVDKLTNHFVFDGYTALASLLKAPLGAMIVLYIILKGYGIALGVI
CCCCCCCCEEEEECCCHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHH
ERPQHELFRFSMRAGLIYMMAMNWDLFSSYMRDLFVSGSESIATRLMQAVHKYPSGGSIN
CCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCHH
QGLQNVLNEILKLGSDLFDAGSLRKLTPYFAGMMVFLSGSVTIGLAFIEIVIAKLMLAVT
HHHHHHHHHHHHHCCHHHCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
LCTAPLFILFTLFDQTKSFFDRWLGVLAGFAFVLIFVSSVVGLCIHLLHWVTYAFLGNTE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
TLTAAIWVPIFIVACLCVMGITQAVAIGKSIGGSVCTSAGSAMVGGFIGGSLGAWGFSKS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCHHHHHHHHCCCCCCCCCCHH
SVQKPINTLRQGLGKASHLVEKGKQLGEASHNVFKQLHKHLRKGAS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA