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The map label for this gene is 54293070

Identifier: 54293070

GI number: 54293070

Start: 125637

End: 126443

Strand: Reverse

Name: 54293070

Synonym: lpl0107

Alternate gene names: NA

Gene position: 126443-125637 (Counterclockwise)

Preceding gene: 54293071

Following gene: 54293069

Centisome position: 3.78

GC content: 35.19

Gene sequence:

>807_bases
ATGGAATGCTTAAGTTTCTGTGTGGCCAAAACCATAGACTTGACTCGTCTTGATCTTCATCTAAAAAACGTCTCTAAGGA
ATTTAGTGCTGTAAAAACCCGAGATGTAATAAGATTAAATTCTCATAAAAACAAAGATCACACCCTGTTCATTTTTAAAA
ATGGAACTGTCGTATCTTGGGGTGTAAAAAGATACCAAATCCACGAATACCTGGATATTATTAAACTGCTTGTAGACAAA
CCTGTAGCACTTTTGGTGCATGATGAATTTCATTATCAAATTGGTGATAAAACAGCCATAGAACCGCATGGTTTTTATGA
CGTGGATTGCCTGACCATTGAAGAAGACAGTGATGAACTAAAGCTCAGTTTGTCTTACGGGTTTTCTCAGTCTGTAAAAT
TACAGTATTTCGAAACCATTATTGACGCATTGATTGAAAAATATAATCCGCTGATTCAGGCCTTATCTCATAAAGGAGAA
ATGCCTATAAGCAGAAAACAAATTCAACAAGTTATTGGTGAAATTTTAGGTGCCAAAAGCGAGTTGAATTTGATTAGTAA
TTTCTTATACCACCCCAAATATTTTTGGCAACACCCCACTCTAGAAGAGCATTTTTCCATGCTTGAGCGCTATTTACATA
TACAAAGACGCGTCAATGCCATTAACCATCGTCTTGATACGCTTAATGAAATTTTCGACATGTTCAATGGTTATTTGGAA
AGTCGCCATGGCCATCACCTGGAAATAATTATTATTGTATTAATCGCAGTAGAAATTATAATTGCGGTTATGAATTTCCA
TTTTTAG

Upstream 100 bases:

>100_bases
AATAAACCTGGAATTTCATGTATACTGTAAGCTAATAGACAGCGTTTGCTAAAATTATTTACTTTGCAAACGCTTTTTTC
ATTGTTGGGTTATTAAAATC

Downstream 100 bases:

>100_bases
GGTTTTTCCCTTAATTTATGGCCACTCTAAAATCCTATTTTCTCAAAGACACCTCTTTGCGCACGGAAATACTTGCCGGA
GCAACGACCTTCCTTACCAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 268; Mature: 268

Protein sequence:

>268_residues
MECLSFCVAKTIDLTRLDLHLKNVSKEFSAVKTRDVIRLNSHKNKDHTLFIFKNGTVVSWGVKRYQIHEYLDIIKLLVDK
PVALLVHDEFHYQIGDKTAIEPHGFYDVDCLTIEEDSDELKLSLSYGFSQSVKLQYFETIIDALIEKYNPLIQALSHKGE
MPISRKQIQQVIGEILGAKSELNLISNFLYHPKYFWQHPTLEEHFSMLERYLHIQRRVNAINHRLDTLNEIFDMFNGYLE
SRHGHHLEIIIIVLIAVEIIIAVMNFHF

Sequences:

>Translated_268_residues
MECLSFCVAKTIDLTRLDLHLKNVSKEFSAVKTRDVIRLNSHKNKDHTLFIFKNGTVVSWGVKRYQIHEYLDIIKLLVDK
PVALLVHDEFHYQIGDKTAIEPHGFYDVDCLTIEEDSDELKLSLSYGFSQSVKLQYFETIIDALIEKYNPLIQALSHKGE
MPISRKQIQQVIGEILGAKSELNLISNFLYHPKYFWQHPTLEEHFSMLERYLHIQRRVNAINHRLDTLNEIFDMFNGYLE
SRHGHHLEIIIIVLIAVEIIIAVMNFHF
>Mature_268_residues
MECLSFCVAKTIDLTRLDLHLKNVSKEFSAVKTRDVIRLNSHKNKDHTLFIFKNGTVVSWGVKRYQIHEYLDIIKLLVDK
PVALLVHDEFHYQIGDKTAIEPHGFYDVDCLTIEEDSDELKLSLSYGFSQSVKLQYFETIIDALIEKYNPLIQALSHKGE
MPISRKQIQQVIGEILGAKSELNLISNFLYHPKYFWQHPTLEEHFSMLERYLHIQRRVNAINHRLDTLNEIFDMFNGYLE
SRHGHHLEIIIIVLIAVEIIIAVMNFHF

Specific function: Unknown

COG id: COG1723

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI157388927, Length=292, Percent_Identity=26.027397260274, Blast_Score=94, Evalue=1e-19,
Organism=Caenorhabditis elegans, GI71996861, Length=211, Percent_Identity=28.436018957346, Blast_Score=92, Evalue=2e-19,
Organism=Saccharomyces cerevisiae, GI6320203, Length=240, Percent_Identity=30.8333333333333, Blast_Score=116, Evalue=4e-27,
Organism=Saccharomyces cerevisiae, GI6320488, Length=250, Percent_Identity=25.6, Blast_Score=84, Evalue=3e-17,
Organism=Saccharomyces cerevisiae, GI6321163, Length=236, Percent_Identity=26.271186440678, Blast_Score=76, Evalue=7e-15,
Organism=Drosophila melanogaster, GI18859701, Length=239, Percent_Identity=25.5230125523013, Blast_Score=82, Evalue=3e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31375; Mature: 31375

Theoretical pI: Translated: 6.66; Mature: 6.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MECLSFCVAKTIDLTRLDLHLKNVSKEFSAVKTRDVIRLNSHKNKDHTLFIFKNGTVVSW
CHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCEEEEEECCEEEEE
GVKRYQIHEYLDIIKLLVDKPVALLVHDEFHYQIGDKTAIEPHGFYDVDCLTIEEDSDEL
CHHHHHHHHHHHHHHHHHCCCEEEEEECCCEEEECCCCCCCCCCCEEEEEEEEECCCCCE
KLSLSYGFSQSVKLQYFETIIDALIEKYNPLIQALSHKGEMPISRKQIQQVIGEILGAKS
EEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCH
ELNLISNFLYHPKYFWQHPTLEEHFSMLERYLHIQRRVNAINHRLDTLNEIFDMFNGYLE
HHHHHHHHHHCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SRHGHHLEIIIIVLIAVEIIIAVMNFHF
CCCCCHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MECLSFCVAKTIDLTRLDLHLKNVSKEFSAVKTRDVIRLNSHKNKDHTLFIFKNGTVVSW
CHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCEEEEEECCEEEEE
GVKRYQIHEYLDIIKLLVDKPVALLVHDEFHYQIGDKTAIEPHGFYDVDCLTIEEDSDEL
CHHHHHHHHHHHHHHHHHCCCEEEEEECCCEEEECCCCCCCCCCCEEEEEEEEECCCCCE
KLSLSYGFSQSVKLQYFETIIDALIEKYNPLIQALSHKGEMPISRKQIQQVIGEILGAKS
EEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCH
ELNLISNFLYHPKYFWQHPTLEEHFSMLERYLHIQRRVNAINHRLDTLNEIFDMFNGYLE
HHHHHHHHHHCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SRHGHHLEIIIIVLIAVEIIIAVMNFHF
CCCCCHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA