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The map label for this gene is 54293033

Identifier: 54293033

GI number: 54293033

Start: 77345

End: 79093

Strand: Direct

Name: 54293033

Synonym: lpl0070

Alternate gene names: NA

Gene position: 77345-79093 (Clockwise)

Preceding gene: 54293032

Following gene: 54293034

Centisome position: 2.31

GC content: 46.6

Gene sequence:

>1749_bases
ATGTCACAAAATCATGTTATAGAATTACCCAATACAAAGCAGCGCCCAATTGTCTGTGATTATGCTGGTGGTCGCTTTCG
ATTAACTGCTGAAGGGTTAACCTTTATCGGTATCGACAAGGATGGCAACTCATTACCACCTCGATGGATATGCGCGCCAT
TGTATGTCGTTGCCAAAACCCGAGATGCTCAGAGCGGTGAATGGGGTCGTTTGCTGGAATGGCAGGATGATGACGGAATA
ACTCATCAGTGGGCAATGCCTCTGGCTTTGTTGCAAGGTGATTCATCCGATGTAAGGCGAGAGTTGGCAAGATTGGGATT
AAGTATTTCTCCCAATCGGACTGCGCGCGATTTATTGGCCTCCTATTTACAGGTCTTTCCAGTAGACGCACGTGCACGAT
GTGTTGATAAACTGGGTTGGCATGGTGATGTCTTTGTAACCGCTTCCCAGTGTATCGGGCAATCAACAGAGAAAATTGTC
TTTCAGAATATCAATGCTATTGAACCAGGAATGTCTTCCAAGGGCAGTGTTGAAGAATGGCGAGATTCAATAGGCAGACT
GGCATCTGGCAACTCAAGACTAGTATTTGCCATCTCTGTAGCTCTTGCACCGGTTCTGGCAAAAATTGTTGGTGAAGACT
CAGGTGGTTTTCATTTCAGAGGTGCATCTTCATCAGGGAAAAGCACTGCGTTAAGTCTAGCTGCCTCTGTTTGGGGAAAC
CCACAATCTTATTGCCGTTTATGGCGCAGCACCACCAATGGGCTTGAAGGCTTGGCGTCATTACACAATGATGGATTGTT
GATCCTTGATGAACTCAGTCAAATTGATCCTAGAGAAGCAGGGGAAGCGGCATATTTGCTAGCCAATGGTCAGGGAAAAA
CACGTGCTTCTCGTACTGGCACGGTCAAGCAATCTTCGAAATGGTCTTTATTTTTCCTGTCTGCTGGTGAAGAATCCCTG
ACGGCACTCATGGCAAAATCAGGGCAGCGCATTAATGCAGGTCAGGAAATCAGGCTTGCTGATATTGAGGCGGATGCAGG
GTGCAAGATGGGGATATTTGAAACAATTCATGATCAGCTCAGTCCAGCTAGCATGGCCTTATCGTTAAAGAAATACAGCT
GCCGATATCATGGCGCAATCGGTATGGCATGGCTTTATCAAATGGTTGCTAACCGCCAAACAATCAGTCGATATATTACC
GATACCATTCAAACCTTTGTTGATGCAGTCATTCAACCCGATGCAACAGGTCAGATAATTCGTGTTGCCAGACGCTTTGC
ATTAGTTGCTGCTGCGGGAGAACTGGCCAGTCAATTTGGCCTGACAGGATGGCAAAAGGGTGAAGCTTTTCATGCTGCGA
AGACTTGTTTCATTGCATGGCAGGATGCTTTTGGGGTTGATGGCCATCGCGAAGATCGCGCCATTATGGCGCAGGTACGC
GCATTCTTTGAATCTCATGGTGCCAGCCGATTTGATAACGCCAACTCACCCAACAATGACAAGATTCTCAACCGAGCCGG
ATTTTATTATACAGATGGCGAAGGGTTTCGAATCTATATGGTATTAACCGAGACGTACAAAAATGAGTTGTGCAAGGGCT
TTGATCAACGCACCGTGACAAGGGTTTTATTACAAGCTGGCTGGCTGAAACCCGCCCCTGATGGCAAAGCCTCACACAAG
CCAAGAATCAAAGGAGTTGGCACCCCAAGATTGTATGTTTTTACCGGTAAAATTTGGGGTGGTGAATAA

Upstream 100 bases:

>100_bases
CGAAGGTCAGTTACAGCTCGTTGAGAACGCATAAATTTAAAATTCGTCAGAATGATTTGCTTCATTCCGATGATTTTTAC
TGTTGTTTGGAGAATAATGT

Downstream 100 bases:

>100_bases
AATTGCTTATACCATCGGTTTTTACGTTGAGCACCGAAGGTGCGAATAAGACTCGTGAAGTTTGGCAACCAGCTCGCTGG
TTAGCTAACTTCACCTATCT

Product: hypothetical protein

Products: NA

Alternate protein names: Prophage Primase; Superfamily II Helicase; Inner Membrane; Primase C 2 Family; Bifunctional DNA Primase/Polymerase; DNA/RNA Helicase; DNA Helicase Inner Membrane Protein; Conserved Domain Protein; Zinc Finger CHC2-Family Protein; Inner Membrane Protein Phage Origin; DNA Primase TraC

Number of amino acids: Translated: 582; Mature: 581

Protein sequence:

>582_residues
MSQNHVIELPNTKQRPIVCDYAGGRFRLTAEGLTFIGIDKDGNSLPPRWICAPLYVVAKTRDAQSGEWGRLLEWQDDDGI
THQWAMPLALLQGDSSDVRRELARLGLSISPNRTARDLLASYLQVFPVDARARCVDKLGWHGDVFVTASQCIGQSTEKIV
FQNINAIEPGMSSKGSVEEWRDSIGRLASGNSRLVFAISVALAPVLAKIVGEDSGGFHFRGASSSGKSTALSLAASVWGN
PQSYCRLWRSTTNGLEGLASLHNDGLLILDELSQIDPREAGEAAYLLANGQGKTRASRTGTVKQSSKWSLFFLSAGEESL
TALMAKSGQRINAGQEIRLADIEADAGCKMGIFETIHDQLSPASMALSLKKYSCRYHGAIGMAWLYQMVANRQTISRYIT
DTIQTFVDAVIQPDATGQIIRVARRFALVAAAGELASQFGLTGWQKGEAFHAAKTCFIAWQDAFGVDGHREDRAIMAQVR
AFFESHGASRFDNANSPNNDKILNRAGFYYTDGEGFRIYMVLTETYKNELCKGFDQRTVTRVLLQAGWLKPAPDGKASHK
PRIKGVGTPRLYVFTGKIWGGE

Sequences:

>Translated_582_residues
MSQNHVIELPNTKQRPIVCDYAGGRFRLTAEGLTFIGIDKDGNSLPPRWICAPLYVVAKTRDAQSGEWGRLLEWQDDDGI
THQWAMPLALLQGDSSDVRRELARLGLSISPNRTARDLLASYLQVFPVDARARCVDKLGWHGDVFVTASQCIGQSTEKIV
FQNINAIEPGMSSKGSVEEWRDSIGRLASGNSRLVFAISVALAPVLAKIVGEDSGGFHFRGASSSGKSTALSLAASVWGN
PQSYCRLWRSTTNGLEGLASLHNDGLLILDELSQIDPREAGEAAYLLANGQGKTRASRTGTVKQSSKWSLFFLSAGEESL
TALMAKSGQRINAGQEIRLADIEADAGCKMGIFETIHDQLSPASMALSLKKYSCRYHGAIGMAWLYQMVANRQTISRYIT
DTIQTFVDAVIQPDATGQIIRVARRFALVAAAGELASQFGLTGWQKGEAFHAAKTCFIAWQDAFGVDGHREDRAIMAQVR
AFFESHGASRFDNANSPNNDKILNRAGFYYTDGEGFRIYMVLTETYKNELCKGFDQRTVTRVLLQAGWLKPAPDGKASHK
PRIKGVGTPRLYVFTGKIWGGE
>Mature_581_residues
SQNHVIELPNTKQRPIVCDYAGGRFRLTAEGLTFIGIDKDGNSLPPRWICAPLYVVAKTRDAQSGEWGRLLEWQDDDGIT
HQWAMPLALLQGDSSDVRRELARLGLSISPNRTARDLLASYLQVFPVDARARCVDKLGWHGDVFVTASQCIGQSTEKIVF
QNINAIEPGMSSKGSVEEWRDSIGRLASGNSRLVFAISVALAPVLAKIVGEDSGGFHFRGASSSGKSTALSLAASVWGNP
QSYCRLWRSTTNGLEGLASLHNDGLLILDELSQIDPREAGEAAYLLANGQGKTRASRTGTVKQSSKWSLFFLSAGEESLT
ALMAKSGQRINAGQEIRLADIEADAGCKMGIFETIHDQLSPASMALSLKKYSCRYHGAIGMAWLYQMVANRQTISRYITD
TIQTFVDAVIQPDATGQIIRVARRFALVAAAGELASQFGLTGWQKGEAFHAAKTCFIAWQDAFGVDGHREDRAIMAQVRA
FFESHGASRFDNANSPNNDKILNRAGFYYTDGEGFRIYMVLTETYKNELCKGFDQRTVTRVLLQAGWLKPAPDGKASHKP
RIKGVGTPRLYVFTGKIWGGE

Specific function: Unknown

COG id: COG5519

COG function: function code L; Superfamily II helicase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 63743; Mature: 63612

Theoretical pI: Translated: 8.60; Mature: 8.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQNHVIELPNTKQRPIVCDYAGGRFRLTAEGLTFIGIDKDGNSLPPRWICAPLYVVAKT
CCCCCEEECCCCCCCCEEEEECCCEEEEEECCEEEEEECCCCCCCCCCHHHCCEEEEEEC
RDAQSGEWGRLLEWQDDDGITHQWAMPLALLQGDSSDVRRELARLGLSISPNRTARDLLA
CCCCCCCCCCEEEEECCCCCCCHHHCCCCEECCCCHHHHHHHHHCCCCCCCCCHHHHHHH
SYLQVFPVDARARCVDKLGWHGDVFVTASQCIGQSTEKIVFQNINAIEPGMSSKGSVEEW
HHHHHCCCCHHHHHHHHCCCCCCEEEEHHHHCCCCHHHHHHHCCCCCCCCCCCCCCHHHH
RDSIGRLASGNSRLVFAISVALAPVLAKIVGEDSGGFHFRGASSSGKSTALSLAASVWGN
HHHHHHHCCCCCEEEEEHHHHHHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHHHHCCC
PQSYCRLWRSTTNGLEGLASLHNDGLLILDELSQIDPREAGEAAYLLANGQGKTRASRTG
HHHHHHHHHHHHHHHHHHHHHCCCCEEEEECHHCCCCCCCCCEEEEEECCCCCCCCCCCC
TVKQSSKWSLFFLSAGEESLTALMAKSGQRINAGQEIRLADIEADAGCKMGIFETIHDQL
CCCCCCCEEEEEEECCHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHC
SPASMALSLKKYSCRYHGAIGMAWLYQMVANRQTISRYITDTIQTFVDAVIQPDATGQII
CCHHHHHHHHHHCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
RVARRFALVAAAGELASQFGLTGWQKGEAFHAAKTCFIAWQDAFGVDGHREDRAIMAQVR
HHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHEEEEEEEECCCCCCCCCCHHHHHHHHH
AFFESHGASRFDNANSPNNDKILNRAGFYYTDGEGFRIYMVLTETYKNELCKGFDQRTVT
HHHHHCCCCCCCCCCCCCCCHHHHCCCCEEECCCCEEEEEEEEHHHHHHHHCCCHHHHHH
RVLLQAGWLKPAPDGKASHKPRIKGVGTPRLYVFTGKIWGGE
HHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCC
>Mature Secondary Structure 
SQNHVIELPNTKQRPIVCDYAGGRFRLTAEGLTFIGIDKDGNSLPPRWICAPLYVVAKT
CCCCEEECCCCCCCCEEEEECCCEEEEEECCEEEEEECCCCCCCCCCHHHCCEEEEEEC
RDAQSGEWGRLLEWQDDDGITHQWAMPLALLQGDSSDVRRELARLGLSISPNRTARDLLA
CCCCCCCCCCEEEEECCCCCCCHHHCCCCEECCCCHHHHHHHHHCCCCCCCCCHHHHHHH
SYLQVFPVDARARCVDKLGWHGDVFVTASQCIGQSTEKIVFQNINAIEPGMSSKGSVEEW
HHHHHCCCCHHHHHHHHCCCCCCEEEEHHHHCCCCHHHHHHHCCCCCCCCCCCCCCHHHH
RDSIGRLASGNSRLVFAISVALAPVLAKIVGEDSGGFHFRGASSSGKSTALSLAASVWGN
HHHHHHHCCCCCEEEEEHHHHHHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHHHHCCC
PQSYCRLWRSTTNGLEGLASLHNDGLLILDELSQIDPREAGEAAYLLANGQGKTRASRTG
HHHHHHHHHHHHHHHHHHHHHCCCCEEEEECHHCCCCCCCCCEEEEEECCCCCCCCCCCC
TVKQSSKWSLFFLSAGEESLTALMAKSGQRINAGQEIRLADIEADAGCKMGIFETIHDQL
CCCCCCCEEEEEEECCHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHC
SPASMALSLKKYSCRYHGAIGMAWLYQMVANRQTISRYITDTIQTFVDAVIQPDATGQII
CCHHHHHHHHHHCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
RVARRFALVAAAGELASQFGLTGWQKGEAFHAAKTCFIAWQDAFGVDGHREDRAIMAQVR
HHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHEEEEEEEECCCCCCCCCCHHHHHHHHH
AFFESHGASRFDNANSPNNDKILNRAGFYYTDGEGFRIYMVLTETYKNELCKGFDQRTVT
HHHHHCCCCCCCCCCCCCCCHHHHCCCCEEECCCCEEEEEEEEHHHHHHHHCCCHHHHHH
RVLLQAGWLKPAPDGKASHKPRIKGVGTPRLYVFTGKIWGGE
HHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA